RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ZNF622Q969S3 477 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLCNKA-206ENST00000491433 BRIP1Q9BX63 1249 aa15.18■□□□□ 0.02
CLCNKA-206ENST00000491433 ZBTB1Q9Y2K1 713 aa15.18■□□□□ 0.02
CLCNKA-206ENST00000491433 MRC1P22897 1456 aa15.18■□□□□ 0.02
CLCNKA-206ENST00000491433 RNMTO43148 476 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-206ENST00000491433 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-206ENST00000491433 TAOK3Q9H2K8 898 aa15.17■□□□□ 0.02
CLCNKA-206ENST00000491433 BCL2L12Q9HB09 334 aa15.17■□□□□ 0.02
CLCNKA-206ENST00000491433 SCN4AP35499 1836 aa15.17■□□□□ 0.02
CLCNKA-206ENST00000491433 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
CLCNKA-206ENST00000491433 C21orf2O43822 256 aa15.16■□□□□ 0.02
CLCNKA-206ENST00000491433 BRPF1P55201 1214 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-206ENST00000491433 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-206ENST00000491433 TTC5Q8N0Z6 440 aa15.16■□□□□ 0.02
CLCNKA-206ENST00000491433 CNKSR1Q969H4 720 aa15.16■□□□□ 0.02
CLCNKA-206ENST00000491433 TEX13AQ9BXU3 409 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-206ENST00000491433 DDX21Q9NR30 783 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLCNKA-206ENST00000491433 AOC2O75106 756 aa15.15■□□□□ 0.02
CLCNKA-206ENST00000491433 SLC39A6Q13433 755 aa15.15■□□□□ 0.02
CLCNKA-206ENST00000491433 MAP1SQ66K74 1059 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-206ENST00000491433 BICDL1Q6ZP65 573 aa15.15■□□□□ 0.02
CLCNKA-206ENST00000491433 PNMA8AQ86V59 439 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-206ENST00000491433 PANK3Q9H999 370 aa15.15■□□□□ 0.02
CLCNKA-206ENST00000491433 ANKRD31Q8N7Z5 1873 aa15.14■□□□□ 0.01
CLCNKA-206ENST00000491433 CARMIL3Q8ND23 1372 aa15.14■□□□□ 0.01
CLCNKA-206ENST00000491433 NPHP1O15259 732 aa15.14■□□□□ 0.01
CLCNKA-206ENST00000491433 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
CLCNKA-206ENST00000491433 IL13P35225 146 aa15.14■□□□□ 0.01
CLCNKA-206ENST00000491433 LGR6Q9HBX8 967 aa15.14■□□□□ 0.01
CLCNKA-206ENST00000491433 UBR2Q8IWV8 1755 aa15.13■□□□□ 0.01
CLCNKA-206ENST00000491433 A0A0C4DFX4 3053 aa15.13■□□□□ 0.01
CLCNKA-206ENST00000491433 EIF5P55010 431 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-206ENST00000491433 ST5P78524 1137 aa15.13■□□□□ 0.01
CLCNKA-206ENST00000491433 STYK1Q6J9G0 422 aa15.13■□□□□ 0.01
CLCNKA-206ENST00000491433 HACL1Q9UJ83 578 aa15.13■□□□□ 0.01
CLCNKA-206ENST00000491433 ARFGEF2Q9Y6D5 1785 aa15.13■□□□□ 0.01
CLCNKA-206ENST00000491433 SCN7AQ01118 1682 aa15.12■□□□□ 0.01
CLCNKA-206ENST00000491433 PRR5LQ6MZQ0 368 aa15.12■□□□□ 0.01
CLCNKA-206ENST00000491433 KNSTRNQ9Y448 316 aa15.12■□□□□ 0.01
CLCNKA-206ENST00000491433 EPHX2P34913 555 aa15.11■□□□□ 0.01
CLCNKA-206ENST00000491433 TBC1D9BQ66K14 1250 aa15.11■□□□□ 0.01
CLCNKA-206ENST00000491433 CNBD1Q8NA66 436 aa15.11■□□□□ 0.01
CLCNKA-206ENST00000491433 MASTLQ96GX5 879 aa15.11■□□□□ 0.01
CLCNKA-206ENST00000491433 SETDB2Q96T68 719 aa15.11■□□□□ 0.01
CLCNKA-206ENST00000491433 COL11A2P13942 1736 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-206ENST00000491433 CACNA1SQ13698 1873 aa15.1■□□□□ 0.01
CLCNKA-206ENST00000491433 IL6STP40189 918 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-206ENST00000491433 TLL2Q9Y6L7 1015 aa15.1■□□□□ 0.01
CLCNKA-206ENST00000491433 SLX4Q8IY92 1834 aa15.09■□□□□ 0.01
CLCNKA-206ENST00000491433 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
CLCNKA-206ENST00000491433 SRGNP10124 158 aa15.08■□□□□ 0
CLCNKA-206ENST00000491433 TEFQ10587 303 aa15.08■□□□□ 0
CLCNKA-206ENST00000491433 CCDC93Q567U6 631 aa15.08■□□□□ 0
CLCNKA-206ENST00000491433 CIAPIN1Q6FI81 312 aa15.08■□□□□ 0
CLCNKA-206ENST00000491433 PRPF40BQ6NWY9 871 aaKnown RBP15.08■□□□□ 0
CLCNKA-206ENST00000491433 HEG1Q9ULI3 1381 aa15.08■□□□□ 0
CLCNKA-206ENST00000491433 ADAMTSL1Q8N6G6 1762 aa15.08■□□□□ 0
CLCNKA-206ENST00000491433 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
CLCNKA-206ENST00000491433 ZNF330Q9Y3S2 320 aaPredicted RBP15.07■□□□□ 0
CLCNKA-206ENST00000491433 HMOX1P09601 288 aa15.06■□□□□ 0
CLCNKA-206ENST00000491433 ZNF790Q6PG37 636 aa15.06■□□□□ 0
CLCNKA-206ENST00000491433 TBC1D2BQ9UPU7 963 aa15.06■□□□□ 0
CLCNKA-206ENST00000491433 FKBP4Q02790 459 aaKnown RBP eCLIP15.05■□□□□ -0
CLCNKA-206ENST00000491433 CTU1Q7Z7A3 348 aaKnown RBP15.05■□□□□ -0
CLCNKA-206ENST00000491433 RTKN2Q8IZC4 609 aa15.05■□□□□ -0
CLCNKA-206ENST00000491433 FMNL2Q96PY5 1086 aa15.05■□□□□ -0
CLCNKA-206ENST00000491433 HPS5Q9UPZ3 1129 aa15.05■□□□□ -0
CLCNKA-206ENST00000491433 ZNF652Q9Y2D9 606 aa15.05■□□□□ -0
CLCNKA-206ENST00000491433 BCORQ6W2J9 1755 aa15.04■□□□□ -0
CLCNKA-206ENST00000491433 CLSPNQ9HAW4 1339 aa15.04■□□□□ -0
CLCNKA-206ENST00000491433 DIAPH1O60610 1272 aaKnown RBP15.04■□□□□ -0
CLCNKA-206ENST00000491433 NPR1P16066 1061 aa15.04■□□□□ -0
CLCNKA-206ENST00000491433 CLEC4GQ6UXB4 293 aa15.04■□□□□ -0
CLCNKA-206ENST00000491433 CCDC24Q8N4L8 307 aa15.04■□□□□ -0
CLCNKA-206ENST00000491433 GAS2L2Q8NHY3 880 aa15.04■□□□□ -0
CLCNKA-206ENST00000491433 ZNF496Q96IT1 587 aaPredicted RBP15.04■□□□□ -0
CLCNKA-206ENST00000491433 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
CLCNKA-206ENST00000491433 CAMTA2O94983 1202 aa15.03■□□□□ -0
CLCNKA-206ENST00000491433 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
CLCNKA-206ENST00000491433 CST9Q5W186 159 aa15.03■□□□□ -0
CLCNKA-206ENST00000491433 NBPF5PQ86XG9 351 aaPredicted RBP15.03■□□□□ -0
CLCNKA-206ENST00000491433 DZIP3Q86Y13 1208 aaKnown RBP15.03■□□□□ -0
CLCNKA-206ENST00000491433 HHIPL1Q96JK4 782 aa15.03■□□□□ -0
CLCNKA-206ENST00000491433 RGL2O15211 777 aa15.02■□□□□ -0
CLCNKA-206ENST00000491433 ALDH1B1P30837 517 aa15.02■□□□□ -0
CLCNKA-206ENST00000491433 SAPCD2Q86UD0 394 aa15.02■□□□□ -0
CLCNKA-206ENST00000491433 C7orf43Q8WVR3 580 aa15.02■□□□□ -0
CLCNKA-206ENST00000491433 SAGE1Q9NXZ1 904 aa15.02■□□□□ -0
CLCNKA-206ENST00000491433 SIPA1L3O60292 1781 aaPredicted RBP15.02□□□□□ -0.01
CLCNKA-206ENST00000491433 RNF123Q5XPI4 1314 aa15.01□□□□□ -0.01
CLCNKA-206ENST00000491433 HSPA5P11021 654 aaKnown RBP15.01□□□□□ -0.01
CLCNKA-206ENST00000491433 FMR1Q06787 632 aaKnown RBP eCLIP15.01□□□□□ -0.01
CLCNKA-206ENST00000491433 NOGQ13253 232 aa15.01□□□□□ -0.01
CLCNKA-206ENST00000491433 TPTE2Q6XPS3 522 aa15.01□□□□□ -0.01
CLCNKA-206ENST00000491433 GPC2Q8N158 579 aa15.01□□□□□ -0.01
CLCNKA-206ENST00000491433 JDP2Q8WYK2 163 aa15.01□□□□□ -0.01
CLCNKA-206ENST00000491433 KLRG2A4D1S0 409 aaPredicted RBP15□□□□□ -0.01
CLCNKA-206ENST00000491433 A1BGP04217 495 aa15□□□□□ -0.01
CLCNKA-206ENST00000491433 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
CLCNKA-206ENST00000491433 FZD9O00144 591 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms