RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 ZNF622Q969S3 477 aaKnown RBP eCLIP11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 TAOK3Q9H2K8 898 aa11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 USP16Q9Y5T5 823 aa11.33□□□□□ -0.6
APOBEC3F-204ENST00000491387 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 DZIP3Q86Y13 1208 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 MASTLQ96GX5 879 aa11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 PCNTO95613 3336 aa11.32□□□□□ -0.6
APOBEC3F-204ENST00000491387 ST5P78524 1137 aa11.31□□□□□ -0.6
APOBEC3F-204ENST00000491387 PRPF40BQ6NWY9 871 aaKnown RBP11.31□□□□□ -0.6
APOBEC3F-204ENST00000491387 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3F-204ENST00000491387 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
APOBEC3F-204ENST00000491387 ZNF330Q9Y3S2 320 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3F-204ENST00000491387 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
APOBEC3F-204ENST00000491387 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
APOBEC3F-204ENST00000491387 ZNF652Q9Y2D9 606 aa11.3□□□□□ -0.6
APOBEC3F-204ENST00000491387 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
APOBEC3F-204ENST00000491387 NPR1P16066 1061 aa11.29□□□□□ -0.6
APOBEC3F-204ENST00000491387 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
APOBEC3F-204ENST00000491387 NBPF5PQ86XG9 351 aaPredicted RBP11.29□□□□□ -0.6
APOBEC3F-204ENST00000491387 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
APOBEC3F-204ENST00000491387 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
APOBEC3F-204ENST00000491387 LAMB4A4D0S4 1761 aa11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 KDM3BQ7LBC6 1761 aa11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 SCN4AP35499 1836 aa11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 PRAMEF22A3QJZ6 481 aa11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 IQCA1LA6NCM1 817 aa11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 PPP2R1AP30153 589 aa11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 CCDC93Q567U6 631 aa11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 TPTE2Q6XPS3 522 aa11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 RTF1Q92541 710 aaKnown RBP11.28□□□□□ -0.6
APOBEC3F-204ENST00000491387 DDNO94850 711 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3F-204ENST00000491387 U2AF1L5P0DN76 240 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3F-204ENST00000491387 U2AF1Q01081 240 aaKnown RBP eCLIP11.27□□□□□ -0.61
APOBEC3F-204ENST00000491387 TAF7Q15545 349 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3F-204ENST00000491387 MCM10Q7L590 875 aa11.27□□□□□ -0.61
APOBEC3F-204ENST00000491387 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3F-204ENST00000491387 PASKQ96RG2 1323 aa11.27□□□□□ -0.61
APOBEC3F-204ENST00000491387 NPHP1O15259 732 aa11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 FKBP4Q02790 459 aaKnown RBP eCLIP11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 CRY2Q49AN0 593 aa11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 LDHDQ86WU2 507 aa11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 NIP7Q9Y221 180 aaKnown RBP eCLIP11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
APOBEC3F-204ENST00000491387 ERVV-1B6SEH8 477 aa11.25□□□□□ -0.61
APOBEC3F-204ENST00000491387 POTEIP0CG38 1075 aa11.25□□□□□ -0.61
APOBEC3F-204ENST00000491387 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
APOBEC3F-204ENST00000491387 ALDH1B1P30837 517 aa11.25□□□□□ -0.61
APOBEC3F-204ENST00000491387 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3F-204ENST00000491387 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
APOBEC3F-204ENST00000491387 TAF1DQ9H5J8 278 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3F-204ENST00000491387 FZD9O00144 591 aa11.24□□□□□ -0.61
APOBEC3F-204ENST00000491387 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3F-204ENST00000491387 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
APOBEC3F-204ENST00000491387 HLFQ16534 295 aa11.24□□□□□ -0.61
APOBEC3F-204ENST00000491387 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
APOBEC3F-204ENST00000491387 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
APOBEC3F-204ENST00000491387 PSMD1Q99460 953 aa11.24□□□□□ -0.61
APOBEC3F-204ENST00000491387 IBTKQ9P2D0 1353 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3F-204ENST00000491387 ADAMTSL1Q8N6G6 1762 aa11.23□□□□□ -0.61
APOBEC3F-204ENST00000491387 HOXA10P31260 410 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3F-204ENST00000491387 GRIPAP1Q4V328 841 aa11.23□□□□□ -0.61
APOBEC3F-204ENST00000491387 NYXQ9GZU5 481 aa11.23□□□□□ -0.61
APOBEC3F-204ENST00000491387 CNTNAP1P78357 1384 aa11.23□□□□□ -0.61
APOBEC3F-204ENST00000491387 NUP98P52948 1817 aa11.23□□□□□ -0.61
APOBEC3F-204ENST00000491387 PNMA8AQ86V59 439 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3F-204ENST00000491387 PLEKHF1Q96S99 279 aa11.22□□□□□ -0.61
APOBEC3F-204ENST00000491387 ZNF541Q9H0D2 1346 aa11.22□□□□□ -0.61
APOBEC3F-204ENST00000491387 ZNF277Q9NRM2 450 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3F-204ENST00000491387 HACL1Q9UJ83 578 aa11.22□□□□□ -0.61
APOBEC3F-204ENST00000491387 ERBB4Q15303 1308 aa11.21□□□□□ -0.61
APOBEC3F-204ENST00000491387 MAP3K15Q6ZN16 1313 aa11.21□□□□□ -0.61
APOBEC3F-204ENST00000491387 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
APOBEC3F-204ENST00000491387 IARSP41252 1262 aaKnown RBP11.21□□□□□ -0.61
APOBEC3F-204ENST00000491387 EIF4A1P60842 406 aaKnown RBP11.21□□□□□ -0.61
APOBEC3F-204ENST00000491387 GPC2Q8N158 579 aa11.21□□□□□ -0.61
APOBEC3F-204ENST00000491387 SYNE4Q8N205 404 aa11.21□□□□□ -0.61
APOBEC3F-204ENST00000491387 ABCC12Q96J65 1359 aa11.2□□□□□ -0.62
APOBEC3F-204ENST00000491387 EPHX2P34913 555 aa11.2□□□□□ -0.62
APOBEC3F-204ENST00000491387 OLFM4Q6UX06 510 aa11.2□□□□□ -0.62
APOBEC3F-204ENST00000491387 PRDM10Q9NQV6 1147 aa11.2□□□□□ -0.62
APOBEC3F-204ENST00000491387 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
APOBEC3F-204ENST00000491387 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
APOBEC3F-204ENST00000491387 NEFMP07197 916 aa11.19□□□□□ -0.62
APOBEC3F-204ENST00000491387 GTF2E1P29083 439 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3F-204ENST00000491387 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
APOBEC3F-204ENST00000491387 ZNF34Q8IZ26 560 aa11.19□□□□□ -0.62
APOBEC3F-204ENST00000491387 CRAMP1Q96RY5 1269 aa11.19□□□□□ -0.62
APOBEC3F-204ENST00000491387 UBN2Q6ZU65 1347 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 RASSF10A6NK89 507 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 VEGFBP49765 207 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 SLC10A5Q5PT55 438 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms