RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	DEFB115	Q30KQ5	88 aa		26.08	■■□□□ 1.77
CDK5RAP2-218	ENST00000491334	HACL1	Q9UJ83	578 aa		26.08	■■□□□ 1.77
CDK5RAP2-218	ENST00000491334	HEG1	Q9ULI3	1381 aa		26.07	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	CCDC93	Q567U6	631 aa		26.07	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	PNMA8A	Q86V59	439 aa	Predicted RBP	26.07	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	C7orf43	Q8WVR3	580 aa		26.07	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	CAMTA2	O94983	1202 aa		26.06	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	HSPA5	P11021	654 aa	Known RBP	26.06	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	MAP2K1	Q02750	393 aa	Predicted RBP	26.06	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	SLX4	Q8IY92	1834 aa		26.05	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	A1BG	P04217	495 aa		26.05	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	ABHD8	Q96I13	439 aa		26.05	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	SCN4A	P35499	1836 aa		26.04	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	RASSF10	A6NK89	507 aa		26.04	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	DIAPH1	O60610	1272 aa	Known RBP	26.04	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	EPHX2	P34913	555 aa		26.04	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	FKBP4	Q02790	459 aa	Known RBP eCLIP	26.04	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	CNTROB	Q8N137	903 aa		26.04	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	FMNL2	Q96PY5	1086 aa		26.04	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	NPR1	P16066	1061 aa		26.03	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	DZIP3	Q86Y13	1208 aa	Known RBP	26.03	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	HSPA8	P11142	646 aa	Known RBP	26.02	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	NBPF5P	Q86XG9	351 aa	Predicted RBP	26.02	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	RTKN2	Q8IZC4	609 aa		26.02	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	IL17RE	Q8NFR9	667 aa		26.02	■■□□□ 1.76
CDK5RAP2-218	ENST00000491334	GNAT3	A8MTJ3	354 aa		26.01	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	COL11A2	P13942	1736 aa	Predicted RBP	26.01	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	CLEC4G	Q6UXB4	293 aa		26.01	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	UBR2	Q8IWV8	1755 aa		26.01	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	WDR33	Q9C0J8	1336 aa	Known RBP	26.01	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	ZNF277	Q9NRM2	450 aa	Predicted RBP	26.01	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	FAM161A	Q3B820	660 aa		26	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	AMER1	Q5JTC6	1135 aa	Predicted RBP	26	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	ZNF541	Q9H0D2	1346 aa		25.99	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	MAP1S	Q66K74	1059 aa	Predicted RBP	25.99	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	GAS2L2	Q8NHY3	880 aa		25.99	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	ABT1	Q9ULW3	272 aa	Known RBP	25.99	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	VIRMA	Q69YN4	1812 aa	Known RBP	25.99	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	KLRG2	A4D1S0	409 aa	Predicted RBP	25.98	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	TPTE2	Q6XPS3	522 aa		25.98	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	ZNF652	Q9Y2D9	606 aa		25.98	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	SCN7A	Q01118	1682 aa		25.97	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	FZD9	O00144	591 aa		25.97	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	ALDH1B1	P30837	517 aa		25.96	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	GPC2	Q8N158	579 aa		25.96	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	BEGAIN	Q9BUH8	593 aa		25.96	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	RNF123	Q5XPI4	1314 aa		25.95	■■□□□ 1.75
CDK5RAP2-218	ENST00000491334	IARS	P41252	1262 aa	Known RBP	25.95	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	SYNE4	Q8N205	404 aa		25.95	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	BTBD11	A6QL63	1104 aa		25.94	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	JDP2	Q8WYK2	163 aa		25.94	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	MLLT1	Q03111	559 aa	Predicted RBP	25.93	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	DDX21	Q9NR30	783 aa	Known RBP eCLIP	25.93	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	USP16	Q9Y5T5	823 aa		25.93	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	CACNA1S	Q13698	1873 aa		25.92	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	ECE1	P42892	770 aa		25.92	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	OLFM4	Q6UX06	510 aa		25.92	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	ARFGEF2	Q9Y6D5	1785 aa		25.92	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	CLSPN	Q9HAW4	1339 aa		25.91	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	CCDC85C	A6NKD9	419 aa		25.91	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	U2SURP	O15042	1029 aa	Known RBP	25.91	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	NIP7	Q9Y221	180 aa	Known RBP eCLIP	25.91	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	RGL2	O15211	777 aa		25.9	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	KCNQ3	O43525	872 aa		25.9	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	TRIM26	Q12899	539 aa	Predicted RBP	25.9	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	GTF2E1	P29083	439 aa	Predicted RBP	25.89	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	LMOD1	P29536	600 aa	Predicted RBP	25.89	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	PIP4K2A	P48426	406 aa	Predicted RBP	25.89	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	RGS19	P49795	217 aa		25.89	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	EIF6	P56537	245 aa	Known RBP	25.89	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	25.89	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	CAPNS2	Q96L46	248 aa		25.89	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	GPR101	Q96P66	508 aa	Predicted RBP	25.89	■■□□□ 1.74
CDK5RAP2-218	ENST00000491334	PSMD1	Q99460	953 aa		25.88	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	GJA3	Q9Y6H8	435 aa		25.88	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	ADAMTSL1	Q8N6G6	1762 aa		25.87	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	SNRPA1	P09661	255 aa	Known RBP	25.87	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	CEMIP	Q8WUJ3	1361 aa		25.86	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	FAM177B	A6PVY3	158 aa		25.86	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	CC2D2B	Q6DHV5	1058 aa		25.86	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	CC2D1B	Q5T0F9	858 aa	Known RBP	25.85	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	PCDH10	Q9P2E7	1040 aa		25.85	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	GRM1	Q13255	1194 aa		25.84	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	GRIPAP1	Q4V328	841 aa		25.83	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	CYP4F22	Q6NT55	531 aa		25.83	■■□□□ 1.73
CDK5RAP2-218	ENST00000491334	PRAMEF22	A3QJZ6	481 aa		25.82	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	PER1	O15534	1290 aa	Predicted RBP	25.82	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	MAP2K2	P36507	400 aa		25.82	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	USP50	Q70EL3	339 aa	Predicted RBP	25.82	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	BCOR	Q6W2J9	1755 aa		25.82	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	EPS15	P42566	896 aa		25.81	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	SIPA1L3	O60292	1781 aa	Predicted RBP	25.8	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	FMR1	Q06787	632 aa	Known RBP eCLIP	25.8	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	CST9	Q5W186	159 aa		25.8	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	NYX	Q9GZU5	481 aa		25.8	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	TLL2	Q9Y6L7	1015 aa		25.8	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	NBPF26	B4DH59	902 aa		25.79	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	CRY2	Q49AN0	593 aa		25.79	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	NBPF10	Q6P3W6	841 aa	Known RBP	25.79	■■□□□ 1.72
CDK5RAP2-218	ENST00000491334	LARGE2	Q8N3Y3	721 aa		25.79	■■□□□ 1.72

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms