RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 AIMP1Q12904 312 aaKnown RBP23.32■■□□□ 1.32
PRDM2-209ENST00000491134 BCL2L12Q9HB09 334 aa23.32■■□□□ 1.32
PRDM2-209ENST00000491134 SRP68Q9UHB9 627 aaKnown RBP23.32■■□□□ 1.32
PRDM2-209ENST00000491134 COL24A1Q17RW2 1714 aa23.31■■□□□ 1.32
PRDM2-209ENST00000491134 ERVV-1B6SEH8 477 aa23.31■■□□□ 1.32
PRDM2-209ENST00000491134 ANKRD13DQ6ZTN6 518 aa23.31■■□□□ 1.32
PRDM2-209ENST00000491134 PLBD2Q8NHP8 589 aa23.31■■□□□ 1.32
PRDM2-209ENST00000491134 ANKRD36CQ5JPF3 1778 aa23.31■■□□□ 1.32
PRDM2-209ENST00000491134 PTPRCP08575 1304 aa23.31■■□□□ 1.32
PRDM2-209ENST00000491134 RFC4P35249 363 aa23.3■■□□□ 1.32
PRDM2-209ENST00000491134 R3HDM1Q15032 1099 aaKnown RBP23.3■■□□□ 1.32
PRDM2-209ENST00000491134 NOB1Q9ULX3 412 aaKnown RBP23.3■■□□□ 1.32
PRDM2-209ENST00000491134 KIF16BQ96L93 1317 aa23.3■■□□□ 1.32
PRDM2-209ENST00000491134 GYS1P13807 737 aa23.29■■□□□ 1.32
PRDM2-209ENST00000491134 HLFQ16534 295 aa23.29■■□□□ 1.32
PRDM2-209ENST00000491134 KSR2Q6VAB6 950 aa23.29■■□□□ 1.32
PRDM2-209ENST00000491134 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
PRDM2-209ENST00000491134 N4BP2Q86UW6 1770 aaPredicted RBP23.28■■□□□ 1.32
PRDM2-209ENST00000491134 PI4KAP2A4QPH2 592 aa23.28■■□□□ 1.32
PRDM2-209ENST00000491134 USPL1Q5W0Q7 1092 aa23.28■■□□□ 1.32
PRDM2-209ENST00000491134 KIF6Q6ZMV9 814 aa23.28■■□□□ 1.32
PRDM2-209ENST00000491134 PI4KAP1Q8N8J0 262 aa23.28■■□□□ 1.32
PRDM2-209ENST00000491134 ZBTB3Q9H5J0 574 aa23.28■■□□□ 1.32
PRDM2-209ENST00000491134 FKBP5Q13451 457 aaPredicted RBP23.27■■□□□ 1.32
PRDM2-209ENST00000491134 CLEC4GQ6UXB4 293 aa23.27■■□□□ 1.32
PRDM2-209ENST00000491134 GIGYF2Q6Y7W6 1299 aaKnown RBP23.27■■□□□ 1.32
PRDM2-209ENST00000491134 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
PRDM2-209ENST00000491134 ZPR1O75312 459 aa23.26■■□□□ 1.31
PRDM2-209ENST00000491134 DDX58O95786 925 aaKnown RBP23.26■■□□□ 1.31
PRDM2-209ENST00000491134 RNF123Q5XPI4 1314 aa23.26■■□□□ 1.31
PRDM2-209ENST00000491134 ATP10DQ9P241 1426 aa23.25■■□□□ 1.31
PRDM2-209ENST00000491134 TNNQ9UQP3 1299 aa23.25■■□□□ 1.31
PRDM2-209ENST00000491134 MAP3K2Q9Y2U5 619 aa23.25■■□□□ 1.31
PRDM2-209ENST00000491134 PSDA5PKW4 1024 aaPredicted RBP23.24■■□□□ 1.31
PRDM2-209ENST00000491134 F6X3S4 739 aa23.24■■□□□ 1.31
PRDM2-209ENST00000491134 TRIM27P14373 513 aa23.24■■□□□ 1.31
PRDM2-209ENST00000491134 FKBP8Q14318 412 aa23.24■■□□□ 1.31
PRDM2-209ENST00000491134 SLC16A10Q8TF71 515 aa23.24■■□□□ 1.31
PRDM2-209ENST00000491134 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
PRDM2-209ENST00000491134 ATF7IPQ6VMQ6 1270 aa23.23■■□□□ 1.31
PRDM2-209ENST00000491134 RIC3Q7Z5B4 369 aa23.23■■□□□ 1.31
PRDM2-209ENST00000491134 DNAAF4Q8WXU2 420 aa23.23■■□□□ 1.31
PRDM2-209ENST00000491134 ARXQ96QS3 562 aa23.23■■□□□ 1.31
PRDM2-209ENST00000491134 METTL22Q9BUU2 404 aaPredicted RBP23.23■■□□□ 1.31
PRDM2-209ENST00000491134 PXDNLA1KZ92 1463 aa23.23■■□□□ 1.31
PRDM2-209ENST00000491134 IPO8O15397 1037 aaKnown RBP23.22■■□□□ 1.31
PRDM2-209ENST00000491134 TM4SF1P30408 202 aa23.22■■□□□ 1.31
PRDM2-209ENST00000491134 ZNF34Q8IZ26 560 aa23.22■■□□□ 1.31
PRDM2-209ENST00000491134 FRAT1Q92837 279 aaPredicted RBP23.22■■□□□ 1.31
PRDM2-209ENST00000491134 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
PRDM2-209ENST00000491134 API5Q9BZZ5 524 aaKnown RBP23.22■■□□□ 1.31
PRDM2-209ENST00000491134 ABCC4O15439 1325 aa23.22■■□□□ 1.31
PRDM2-209ENST00000491134 MSH5O43196 834 aa23.21■■□□□ 1.31
PRDM2-209ENST00000491134 ZKSCAN2Q63HK3 967 aa23.21■■□□□ 1.31
PRDM2-209ENST00000491134 TBC1D9BQ66K14 1250 aa23.21■■□□□ 1.31
PRDM2-209ENST00000491134 AFDNP55196 1824 aaKnown RBP23.21■■□□□ 1.31
PRDM2-209ENST00000491134 IGKV5-2P06315 115 aa23.2■■□□□ 1.3
PRDM2-209ENST00000491134 TRIM28Q13263 835 aaKnown RBP23.2■■□□□ 1.3
PRDM2-209ENST00000491134 BEND3Q5T5X7 828 aa23.2■■□□□ 1.3
PRDM2-209ENST00000491134 ZNF652Q9Y2D9 606 aa23.2■■□□□ 1.3
PRDM2-209ENST00000491134 IBTKQ9P2D0 1353 aaPredicted RBP23.19■■□□□ 1.3
PRDM2-209ENST00000491134 UBN2Q6ZU65 1347 aa23.19■■□□□ 1.3
PRDM2-209ENST00000491134 PLIN1O60240 522 aa23.19■■□□□ 1.3
PRDM2-209ENST00000491134 NFIXQ14938 502 aa23.19■■□□□ 1.3
PRDM2-209ENST00000491134 NLGN1Q8N2Q7 840 aa23.19■■□□□ 1.3
PRDM2-209ENST00000491134 NRXN2Q9P2S2 1712 aa23.19■■□□□ 1.3
PRDM2-209ENST00000491134 RLBP1P12271 317 aa23.18■■□□□ 1.3
PRDM2-209ENST00000491134 RRP1P56182 461 aaKnown RBP23.18■■□□□ 1.3
PRDM2-209ENST00000491134 HSP90AB3PQ58FF7 597 aa23.18■■□□□ 1.3
PRDM2-209ENST00000491134 MYD88Q99836 296 aa23.18■■□□□ 1.3
PRDM2-209ENST00000491134 LINS1Q8NG48 757 aa23.17■■□□□ 1.3
PRDM2-209ENST00000491134 ATP5J2-PTCD1G3V325 749 aa23.16■■□□□ 1.3
PRDM2-209ENST00000491134 DDR1Q08345 913 aa23.16■■□□□ 1.3
PRDM2-209ENST00000491134 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
PRDM2-209ENST00000491134 INTS3Q68E01 1043 aaKnown RBP23.16■■□□□ 1.3
PRDM2-209ENST00000491134 NLRP10Q86W26 655 aa23.16■■□□□ 1.3
PRDM2-209ENST00000491134 MTFR1LQ9H019 292 aa23.16■■□□□ 1.3
PRDM2-209ENST00000491134 NEURL1BA8MQ27 555 aa23.15■■□□□ 1.3
PRDM2-209ENST00000491134 SGIP1Q9BQI5 828 aa23.15■■□□□ 1.3
PRDM2-209ENST00000491134 NIP7Q9Y221 180 aaKnown RBP eCLIP23.15■■□□□ 1.3
PRDM2-209ENST00000491134 POLRMTO00411 1230 aaKnown RBP23.14■■□□□ 1.29
PRDM2-209ENST00000491134 ZBTB7AO95365 584 aa23.14■■□□□ 1.29
PRDM2-209ENST00000491134 CENPBP07199 599 aaPredicted RBP23.14■■□□□ 1.29
PRDM2-209ENST00000491134 GPTP24298 496 aa23.14■■□□□ 1.29
PRDM2-209ENST00000491134 CWF19L2Q2TBE0 894 aaKnown RBP23.14■■□□□ 1.29
PRDM2-209ENST00000491134 DZIP1LQ8IYY4 767 aaKnown RBP23.14■■□□□ 1.29
PRDM2-209ENST00000491134 CCDC191Q8NCU4 936 aa23.14■■□□□ 1.29
PRDM2-209ENST00000491134 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
PRDM2-209ENST00000491134 SUPT16HQ9Y5B9 1047 aaKnown RBP23.14■■□□□ 1.29
PRDM2-209ENST00000491134 ALDH1L1O75891 902 aa23.13■■□□□ 1.29
PRDM2-209ENST00000491134 NEXNQ0ZGT2 675 aa23.13■■□□□ 1.29
PRDM2-209ENST00000491134 PDE3AQ14432 1141 aa23.13■■□□□ 1.29
PRDM2-209ENST00000491134 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
PRDM2-209ENST00000491134 SLC4A10Q6U841 1118 aa23.13■■□□□ 1.29
PRDM2-209ENST00000491134 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.13■■□□□ 1.29
PRDM2-209ENST00000491134 CARMIL3Q8ND23 1372 aa23.13■■□□□ 1.29
PRDM2-209ENST00000491134 MMP10P09238 476 aa23.12■■□□□ 1.29
PRDM2-209ENST00000491134 PARP10Q53GL7 1025 aa23.12■■□□□ 1.29
PRDM2-209ENST00000491134 SUSD4Q5VX71 490 aa23.12■■□□□ 1.29
PRDM2-209ENST00000491134 BICDL1Q6ZP65 573 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms