RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-205ENST00000490821 CDCA8Q53HL2 280 aa10.79□□□□□ -0.68
ALMS1-205ENST00000490821 C1orf141Q5JVX7 400 aa10.79□□□□□ -0.68
ALMS1-205ENST00000490821 BRIP1Q9BX63 1249 aa10.79□□□□□ -0.68
ALMS1-205ENST00000490821 CASP8AP2Q9UKL3 1982 aa10.79□□□□□ -0.68
ALMS1-205ENST00000490821 WDR33Q9C0J8 1336 aaKnown RBP10.79□□□□□ -0.68
ALMS1-205ENST00000490821 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
ALMS1-205ENST00000490821 MAP2K1Q02750 393 aaPredicted RBP10.78□□□□□ -0.68
ALMS1-205ENST00000490821 DEFB115Q30KQ5 88 aa10.78□□□□□ -0.68
ALMS1-205ENST00000490821 PRR5LQ6MZQ0 368 aa10.78□□□□□ -0.68
ALMS1-205ENST00000490821 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
ALMS1-205ENST00000490821 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
ALMS1-205ENST00000490821 CCDC24Q8N4L8 307 aa10.78□□□□□ -0.68
ALMS1-205ENST00000490821 PDZRN3Q9UPQ7 1066 aa10.78□□□□□ -0.68
ALMS1-205ENST00000490821 PDE6BP35913 854 aa10.77□□□□□ -0.69
ALMS1-205ENST00000490821 SLC39A6Q13433 755 aa10.77□□□□□ -0.69
ALMS1-205ENST00000490821 EAPPQ56P03 285 aaPredicted RBP10.77□□□□□ -0.69
ALMS1-205ENST00000490821 TBC1D9BQ66K14 1250 aa10.77□□□□□ -0.69
ALMS1-205ENST00000490821 SLC52A2Q9HAB3 445 aa10.77□□□□□ -0.69
ALMS1-205ENST00000490821 ZNF541Q9H0D2 1346 aa10.77□□□□□ -0.69
ALMS1-205ENST00000490821 TRPM7Q96QT4 1865 aa10.76□□□□□ -0.69
ALMS1-205ENST00000490821 LTBP1Q14766 1721 aa10.76□□□□□ -0.69
ALMS1-205ENST00000490821 EIF5P55010 431 aaKnown RBP10.76□□□□□ -0.69
ALMS1-205ENST00000490821 PRPF40BQ6NWY9 871 aaKnown RBP10.76□□□□□ -0.69
ALMS1-205ENST00000490821 LGR6Q9HBX8 967 aa10.76□□□□□ -0.69
ALMS1-205ENST00000490821 CANXP27824 592 aaKnown RBP10.75□□□□□ -0.69
ALMS1-205ENST00000490821 EPHX2P34913 555 aa10.75□□□□□ -0.69
ALMS1-205ENST00000490821 MAP1SQ66K74 1059 aaPredicted RBP10.75□□□□□ -0.69
ALMS1-205ENST00000490821 STYK1Q6J9G0 422 aa10.75□□□□□ -0.69
ALMS1-205ENST00000490821 CNTROBQ8N137 903 aa10.75□□□□□ -0.69
ALMS1-205ENST00000490821 C7orf43Q8WVR3 580 aa10.75□□□□□ -0.69
ALMS1-205ENST00000490821 HACL1Q9UJ83 578 aa10.75□□□□□ -0.69
ALMS1-205ENST00000490821 SRGNP10124 158 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 AKAP4Q5JQC9 854 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 SOGA3Q5TF21 947 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 SULT6B1Q6IMI4 303 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 CNKSR1Q969H4 720 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 ABT1Q9ULW3 272 aaKnown RBP10.74□□□□□ -0.69
ALMS1-205ENST00000490821 CLEC11AQ9Y240 323 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 BCORQ6W2J9 1755 aa10.74□□□□□ -0.69
ALMS1-205ENST00000490821 MASTLQ96GX5 879 aa10.73□□□□□ -0.69
ALMS1-205ENST00000490821 CAPNS2Q96L46 248 aa10.73□□□□□ -0.69
ALMS1-205ENST00000490821 RNF123Q5XPI4 1314 aa10.73□□□□□ -0.69
ALMS1-205ENST00000490821 RNMTO43148 476 aaKnown RBP10.72□□□□□ -0.69
ALMS1-205ENST00000490821 FMR1Q06787 632 aaKnown RBP eCLIP10.72□□□□□ -0.69
ALMS1-205ENST00000490821 PNMA8AQ86V59 439 aaPredicted RBP10.72□□□□□ -0.69
ALMS1-205ENST00000490821 DDX21Q9NR30 783 aaKnown RBP eCLIP10.72□□□□□ -0.69
ALMS1-205ENST00000490821 ZNF277Q9NRM2 450 aaPredicted RBP10.72□□□□□ -0.69
ALMS1-205ENST00000490821 TSKSQ9UJT2 592 aa10.72□□□□□ -0.69
ALMS1-205ENST00000490821 A0A087WZG4 1122 aa10.71□□□□□ -0.69
ALMS1-205ENST00000490821 FZD9O00144 591 aa10.71□□□□□ -0.69
ALMS1-205ENST00000490821 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.69
ALMS1-205ENST00000490821 CCDC93Q567U6 631 aa10.71□□□□□ -0.69
ALMS1-205ENST00000490821 CYP4F22Q6NT55 531 aa10.71□□□□□ -0.69
ALMS1-205ENST00000490821 OLFM4Q6UX06 510 aa10.71□□□□□ -0.69
ALMS1-205ENST00000490821 CNBD1Q8NA66 436 aa10.71□□□□□ -0.69
ALMS1-205ENST00000490821 GPR101Q96P66 508 aaPredicted RBP10.71□□□□□ -0.69
ALMS1-205ENST00000490821 MCOLN1Q9GZU1 580 aa10.71□□□□□ -0.69
ALMS1-205ENST00000490821 TBC1D2BQ9UPU7 963 aa10.71□□□□□ -0.69
ALMS1-205ENST00000490821 COL4A5P29400 1685 aa10.7□□□□□ -0.7
ALMS1-205ENST00000490821 SNED1Q8TER0 1413 aa10.7□□□□□ -0.7
ALMS1-205ENST00000490821 STARD3NLO95772 234 aa10.7□□□□□ -0.7
ALMS1-205ENST00000490821 IL13P35225 146 aa10.7□□□□□ -0.7
ALMS1-205ENST00000490821 BEGAINQ9BUH8 593 aa10.7□□□□□ -0.7
ALMS1-205ENST00000490821 SIPA1L3O60292 1781 aaPredicted RBP10.7□□□□□ -0.7
ALMS1-205ENST00000490821 CAMTA2O94983 1202 aa10.69□□□□□ -0.7
ALMS1-205ENST00000490821 ECE1P42892 770 aa10.69□□□□□ -0.7
ALMS1-205ENST00000490821 ST5P78524 1137 aa10.69□□□□□ -0.7
ALMS1-205ENST00000490821 CST9Q5W186 159 aa10.69□□□□□ -0.7
ALMS1-205ENST00000490821 GPC2Q8N158 579 aa10.69□□□□□ -0.7
ALMS1-205ENST00000490821 CFAP44Q96MT7 982 aa10.69□□□□□ -0.7
ALMS1-205ENST00000490821 SETDB2Q96T68 719 aa10.69□□□□□ -0.7
ALMS1-205ENST00000490821 PITPNM1O00562 1244 aa10.68□□□□□ -0.7
ALMS1-205ENST00000490821 AOC2O75106 756 aa10.68□□□□□ -0.7
ALMS1-205ENST00000490821 IL6STP40189 918 aaPredicted RBP10.68□□□□□ -0.7
ALMS1-205ENST00000490821 IARSP41252 1262 aaKnown RBP10.68□□□□□ -0.7
ALMS1-205ENST00000490821 GRM1Q13255 1194 aa10.68□□□□□ -0.7
ALMS1-205ENST00000490821 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
ALMS1-205ENST00000490821 TLL2Q9Y6L7 1015 aa10.68□□□□□ -0.7
ALMS1-205ENST00000490821 HEG1Q9ULI3 1381 aa10.67□□□□□ -0.7
ALMS1-205ENST00000490821 KLRG2A4D1S0 409 aaPredicted RBP10.67□□□□□ -0.7
ALMS1-205ENST00000490821 TRAF5O00463 557 aa10.67□□□□□ -0.7
ALMS1-205ENST00000490821 NPR1P16066 1061 aa10.67□□□□□ -0.7
ALMS1-205ENST00000490821 MAP2K2P36507 400 aa10.67□□□□□ -0.7
ALMS1-205ENST00000490821 ZNF496Q96IT1 587 aaPredicted RBP10.67□□□□□ -0.7
ALMS1-205ENST00000490821 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
ALMS1-205ENST00000490821 NPHP1O15259 732 aa10.66□□□□□ -0.7
ALMS1-205ENST00000490821 A1BGP04217 495 aa10.66□□□□□ -0.7
ALMS1-205ENST00000490821 SCNN1DP51172 638 aa10.66□□□□□ -0.7
ALMS1-205ENST00000490821 MTHFSDQ2M296 383 aaKnown RBP10.66□□□□□ -0.7
ALMS1-205ENST00000490821 RTKN2Q8IZC4 609 aa10.66□□□□□ -0.7
ALMS1-205ENST00000490821 SYNE4Q8N205 404 aa10.66□□□□□ -0.7
ALMS1-205ENST00000490821 CA12O43570 354 aa10.65□□□□□ -0.7
ALMS1-205ENST00000490821 EPS15P42566 896 aa10.65□□□□□ -0.7
ALMS1-205ENST00000490821 DGKZQ13574 1117 aa10.65□□□□□ -0.7
ALMS1-205ENST00000490821 TTC5Q8N0Z6 440 aa10.65□□□□□ -0.7
ALMS1-205ENST00000490821 HMOX1P09601 288 aa10.64□□□□□ -0.71
ALMS1-205ENST00000490821 BRPF1P55201 1214 aaPredicted RBP10.64□□□□□ -0.71
ALMS1-205ENST00000490821 ZNF790Q6PG37 636 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms