RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 CPSF1Q10570 1443 aaKnown RBP6.67□□□□□ -1.34
EPCAM-206ENST00000490733 NCOA3Q9Y6Q9 1424 aa6.67□□□□□ -1.34
EPCAM-206ENST00000490733 KIF20BQ96Q89 1820 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 WNT7AO00755 349 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 LILRB3O75022 631 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 TUSC1Q2TAM9 212 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 KCTD17Q8N5Z5 321 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 EVA1BQ9NVM1 165 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 ANKRD26Q9UPS8 1709 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 ANKARQ7Z5J8 1434 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 NSD3Q9BZ95 1437 aa6.66□□□□□ -1.34
EPCAM-206ENST00000490733 PLEKHG3A1L390 1219 aa6.65□□□□□ -1.34
EPCAM-206ENST00000490733 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
EPCAM-206ENST00000490733 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
EPCAM-206ENST00000490733 TERTO14746 1132 aaKnown RBP6.65□□□□□ -1.34
EPCAM-206ENST00000490733 KCNH2Q12809 1159 aa6.65□□□□□ -1.34
EPCAM-206ENST00000490733 LYPD8Q6UX82 237 aa6.65□□□□□ -1.34
EPCAM-206ENST00000490733 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
EPCAM-206ENST00000490733 CYP4X1Q8N118 509 aa6.65□□□□□ -1.34
EPCAM-206ENST00000490733 MRGPRX2Q96LB1 330 aa6.65□□□□□ -1.34
EPCAM-206ENST00000490733 RSPH6AQ9H0K4 717 aa6.65□□□□□ -1.34
EPCAM-206ENST00000490733 UNC93B1Q9H1C4 597 aa6.65□□□□□ -1.34
EPCAM-206ENST00000490733 C19orf44Q9H6X5 657 aa6.65□□□□□ -1.34
EPCAM-206ENST00000490733 PRKRIP1Q9H875 184 aaPredicted RBP6.65□□□□□ -1.34
EPCAM-206ENST00000490733 PARD3Q8TEW0 1356 aa6.65□□□□□ -1.35
EPCAM-206ENST00000490733 DCCP43146 1447 aa6.65□□□□□ -1.35
EPCAM-206ENST00000490733 MST1RQ04912 1400 aa6.65□□□□□ -1.35
EPCAM-206ENST00000490733 SSH2Q76I76 1423 aa6.65□□□□□ -1.35
EPCAM-206ENST00000490733 MARF1Q9Y4F3 1742 aaKnown RBP6.64□□□□□ -1.35
EPCAM-206ENST00000490733 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
EPCAM-206ENST00000490733 WNT7BP56706 349 aa6.64□□□□□ -1.35
EPCAM-206ENST00000490733 RTL5Q5HYW3 569 aaPredicted RBP6.64□□□□□ -1.35
EPCAM-206ENST00000490733 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
EPCAM-206ENST00000490733 RC3H1Q5TC82 1133 aaKnown RBP6.64□□□□□ -1.35
EPCAM-206ENST00000490733 DDRGK1Q96HY6 314 aa6.64□□□□□ -1.35
EPCAM-206ENST00000490733 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
EPCAM-206ENST00000490733 ACEP12821 1306 aa6.64□□□□□ -1.35
EPCAM-206ENST00000490733 POLR3AO14802 1390 aaPredicted RBP6.64□□□□□ -1.35
EPCAM-206ENST00000490733 NPC1L1Q9UHC9 1359 aa6.64□□□□□ -1.35
EPCAM-206ENST00000490733 C1orf167Q5SNV9 1468 aa6.64□□□□□ -1.35
EPCAM-206ENST00000490733 ANP32CO43423 234 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 USP6P35125 1406 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 CNGB1Q14028 1251 aaPredicted RBP6.63□□□□□ -1.35
EPCAM-206ENST00000490733 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 CC2D1BQ5T0F9 858 aaKnown RBP6.63□□□□□ -1.35
EPCAM-206ENST00000490733 C14orf37Q86TY3 774 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 PMFBP1Q8TBY8 1022 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 TSC1Q92574 1164 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 ORAI2Q96SN7 254 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 TRPM3Q9HCF6 1732 aaPredicted RBP6.63□□□□□ -1.35
EPCAM-206ENST00000490733 TERF2IPQ9NYB0 399 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 KNSTRNQ9Y448 316 aa6.63□□□□□ -1.35
EPCAM-206ENST00000490733 PIK3C2AO00443 1686 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 KIF1AQ12756 1690 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 EDC4Q6P2E9 1401 aaKnown RBP6.62□□□□□ -1.35
EPCAM-206ENST00000490733 MSH6P52701 1360 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 KTN1Q86UP2 1357 aaKnown RBP6.62□□□□□ -1.35
EPCAM-206ENST00000490733 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
EPCAM-206ENST00000490733 FYB1O15117 783 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 F12P00748 615 aaPredicted RBP6.62□□□□□ -1.35
EPCAM-206ENST00000490733 CTHP32929 405 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 SH3BP2P78314 561 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 SKIV2LQ15477 1246 aaKnown RBP6.62□□□□□ -1.35
EPCAM-206ENST00000490733 LINC01559Q495D7 138 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 SH3D19Q5HYK7 790 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 SNIP1Q8TAD8 396 aaKnown RBP6.62□□□□□ -1.35
EPCAM-206ENST00000490733 KRTAP9-2Q9BYQ4 174 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 MAP10Q9P2G4 905 aa6.62□□□□□ -1.35
EPCAM-206ENST00000490733 USP54Q70EL1 1684 aa6.61□□□□□ -1.35
EPCAM-206ENST00000490733 J3QL48 77 aa6.61□□□□□ -1.35
EPCAM-206ENST00000490733 ESCO1Q5FWF5 840 aa6.61□□□□□ -1.35
EPCAM-206ENST00000490733 HDGFL2Q7Z4V5 671 aaPredicted RBP6.61□□□□□ -1.35
EPCAM-206ENST00000490733 KRTAP1-3Q8IUG1 177 aa6.61□□□□□ -1.35
EPCAM-206ENST00000490733 PROCA1Q8NCQ7 364 aaPredicted RBP6.61□□□□□ -1.35
EPCAM-206ENST00000490733 BAP1Q92560 729 aa6.61□□□□□ -1.35
EPCAM-206ENST00000490733 PSMG3-AS1Q96PY0 264 aa6.61□□□□□ -1.35
EPCAM-206ENST00000490733 MAP2P11137 1827 aaKnown RBP6.61□□□□□ -1.35
EPCAM-206ENST00000490733 CGNL1Q0VF96 1302 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 TTC21BQ7Z4L5 1316 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 CCER2I3L3R5 266 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 AVPP01185 164 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 SMPD1P17405 629 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 ATF3P18847 181 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 RALBP1Q15311 655 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 NEUROD2Q15784 382 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 NME9Q86XW9 330 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.6□□□□□ -1.35
EPCAM-206ENST00000490733 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.6□□□□□ -1.35
EPCAM-206ENST00000490733 GGNBP2Q9H3C7 697 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 ALS2Q96Q42 1657 aa6.6□□□□□ -1.35
EPCAM-206ENST00000490733 OVOS2A0A0J9YW53 1432 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 OVOS2Q6IE36 1432 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 NSD2O96028 1365 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 MYBBP1AQ9BQG0 1328 aaKnown RBP6.59□□□□□ -1.35
EPCAM-206ENST00000490733 NHSL1Q5SYE7 1610 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 KRTAP9-6A0A140TA67 174 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 SIAH2O43255 324 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 FOXO3O43524 673 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 PPP2R1AP30153 589 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 CRIPAKQ8N1N5 446 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms