RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 AOPEPQ8N6M6 819 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 TIGD1Q96MW7 591 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 IBTKQ9P2D0 1353 aaPredicted RBP15.03■□□□□ -0
SHOX2-205ENST00000490689 BTBD11A6QL63 1104 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 PSME1Q06323 249 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 CBX8Q9HC52 389 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 DNAI1Q9UI46 699 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 STX1AQ16623 288 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 MTHFSDQ2M296 383 aaKnown RBP15.03■□□□□ -0
SHOX2-205ENST00000490689 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 KIF20AO95235 890 aa15.02■□□□□ -0
SHOX2-205ENST00000490689 IL13P35225 146 aa15.02■□□□□ -0
SHOX2-205ENST00000490689 ERCC4Q92889 916 aaPredicted RBP15.02■□□□□ -0
SHOX2-205ENST00000490689 PHAXQ9H814 394 aaKnown RBP15.02■□□□□ -0
SHOX2-205ENST00000490689 FANCAO15360 1455 aa15.02■□□□□ -0
SHOX2-205ENST00000490689 AK7Q96M32 723 aa15.02□□□□□ -0.01
SHOX2-205ENST00000490689 FKBP4Q02790 459 aaKnown RBP eCLIP15.02□□□□□ -0.01
SHOX2-205ENST00000490689 NOC3LQ8WTT2 800 aaKnown RBP15.02□□□□□ -0.01
SHOX2-205ENST00000490689 PDLIM2Q96JY6 352 aa15.02□□□□□ -0.01
SHOX2-205ENST00000490689 FEZ1Q99689 392 aa15.02□□□□□ -0.01
SHOX2-205ENST00000490689 PHF23Q9BUL5 403 aaPredicted RBP15.02□□□□□ -0.01
SHOX2-205ENST00000490689 NRBP1Q9UHY1 535 aa15.02□□□□□ -0.01
SHOX2-205ENST00000490689 LIG1P18858 919 aa15.01□□□□□ -0.01
SHOX2-205ENST00000490689 KRT32Q14532 448 aa15.01□□□□□ -0.01
SHOX2-205ENST00000490689 BMS1Q14692 1282 aaKnown RBP15.01□□□□□ -0.01
SHOX2-205ENST00000490689 PCMTD1Q96MG8 357 aaPredicted RBP15.01□□□□□ -0.01
SHOX2-205ENST00000490689 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
SHOX2-205ENST00000490689 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
SHOX2-205ENST00000490689 MPRIPQ6WCQ1 1025 aa15.01□□□□□ -0.01
SHOX2-205ENST00000490689 EVI5LQ96CN4 794 aa15.01□□□□□ -0.01
SHOX2-205ENST00000490689 HOOK1Q9UJC3 728 aaKnown RBP15.01□□□□□ -0.01
SHOX2-205ENST00000490689 ELF2Q15723 593 aa15.01□□□□□ -0.01
SHOX2-205ENST00000490689 LARP1Q6PKG0 1096 aaKnown RBP15.01□□□□□ -0.01
SHOX2-205ENST00000490689 LRRIQ1Q96JM4 1722 aa15.01□□□□□ -0.01
SHOX2-205ENST00000490689 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
SHOX2-205ENST00000490689 KIF2AO00139 706 aaPredicted RBP15□□□□□ -0.01
SHOX2-205ENST00000490689 SYT10Q6XYQ8 523 aa15□□□□□ -0.01
SHOX2-205ENST00000490689 CCP110O43303 1012 aa15□□□□□ -0.01
SHOX2-205ENST00000490689 SLU7O95391 586 aaKnown RBP15□□□□□ -0.01
SHOX2-205ENST00000490689 DMTNQ08495 405 aa15□□□□□ -0.01
SHOX2-205ENST00000490689 CCDC102AQ96A19 550 aa15□□□□□ -0.01
SHOX2-205ENST00000490689 RTL1A6NKG5 1358 aa15□□□□□ -0.01
SHOX2-205ENST00000490689 CCDC85AQ96PX6 553 aaPredicted RBP15□□□□□ -0.01
SHOX2-205ENST00000490689 LMOD1P29536 600 aaPredicted RBP14.99□□□□□ -0.01
SHOX2-205ENST00000490689 NOM1Q5C9Z4 860 aaKnown RBP14.99□□□□□ -0.01
SHOX2-205ENST00000490689 CDC37L1Q7L3B6 337 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 NEMFO60524 1076 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
SHOX2-205ENST00000490689 ZNF397Q8NF99 534 aaPredicted RBP14.99□□□□□ -0.01
SHOX2-205ENST00000490689 CHPF2Q9P2E5 772 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 CCDC171Q6TFL3 1326 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 SGSM2O43147 1006 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 SAFBQ15424 915 aaKnown RBP eCLIP14.99□□□□□ -0.01
SHOX2-205ENST00000490689 ARHGAP29Q52LW3 1261 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 CPLX3Q8WVH0 158 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 NEK1Q96PY6 1258 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 MAST1Q9Y2H9 1570 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 CREB3L3Q68CJ9 461 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
SHOX2-205ENST00000490689 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-205ENST00000490689 SYNMO15061 1565 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 CHL1O00533 1208 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 SLC3A2P08195 630 aaKnown RBP14.98□□□□□ -0.01
SHOX2-205ENST00000490689 ATP2B3Q16720 1220 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 MAP3K2Q9Y2U5 619 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 HSPA4P34932 840 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 RRP12Q5JTH9 1297 aaKnown RBP14.98□□□□□ -0.01
SHOX2-205ENST00000490689 RIMS2Q9UQ26 1411 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 IPO7O95373 1038 aaKnown RBP14.98□□□□□ -0.01
SHOX2-205ENST00000490689 TOP1P11387 765 aaKnown RBP14.98□□□□□ -0.01
SHOX2-205ENST00000490689 LMAN1P49257 510 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 ZNF75DP51815 510 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 FAM193AP78312 1265 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 CHST3Q7LGC8 479 aa14.98□□□□□ -0.01
SHOX2-205ENST00000490689 KDM5AP29375 1690 aaKnown RBP14.98□□□□□ -0.01
SHOX2-205ENST00000490689 DHX16O60231 1041 aaKnown RBP14.97□□□□□ -0.01
SHOX2-205ENST00000490689 TRPM1Q7Z4N2 1603 aa14.97□□□□□ -0.01
SHOX2-205ENST00000490689 CTAGE5O15320 804 aa14.97□□□□□ -0.01
SHOX2-205ENST00000490689 PDIA4P13667 645 aaKnown RBP14.97□□□□□ -0.01
SHOX2-205ENST00000490689 GSDMDP57764 484 aa14.97□□□□□ -0.01
SHOX2-205ENST00000490689 GNG11P61952 73 aa14.97□□□□□ -0.01
SHOX2-205ENST00000490689 LRRFIP1Q32MZ4 808 aaKnown RBP14.97□□□□□ -0.01
SHOX2-205ENST00000490689 AXDND1Q5T1B0 1012 aaPredicted RBP14.97□□□□□ -0.01
SHOX2-205ENST00000490689 DDX46Q7L014 1031 aaKnown RBP14.97□□□□□ -0.01
SHOX2-205ENST00000490689 RUFY3Q7L099 469 aa14.97□□□□□ -0.01
SHOX2-205ENST00000490689 UGGT1Q9NYU2 1555 aa14.97□□□□□ -0.01
SHOX2-205ENST00000490689 HAND2P61296 217 aa14.97□□□□□ -0.01
SHOX2-205ENST00000490689 NAA30Q147X3 362 aaPredicted RBP14.97□□□□□ -0.01
SHOX2-205ENST00000490689 C8orf76Q96K31 380 aa14.97□□□□□ -0.01
SHOX2-205ENST00000490689 PLEKHO1Q53GL0 409 aaPredicted RBP14.96□□□□□ -0.01
SHOX2-205ENST00000490689 VPS53Q5VIR6 699 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 KLHL10Q6JEL2 608 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 FAM227BQ96M60 508 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 ZNF215Q9UL58 517 aaPredicted RBP14.96□□□□□ -0.01
SHOX2-205ENST00000490689 ACEP12821 1306 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 A0A087WWV3 80 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 Q6ZUG5 572 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 TTC6Q86TZ1 520 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms