RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CANXP27824 592 aaKnown RBP18.96■□□□□ 0.63
EXOSC3-207ENST00000490516 SLC39A6Q13433 755 aa18.96■□□□□ 0.63
EXOSC3-207ENST00000490516 AEBP1Q8IUX7 1158 aa18.96■□□□□ 0.63
EXOSC3-207ENST00000490516 DDX21Q9NR30 783 aaKnown RBP eCLIP18.96■□□□□ 0.63
EXOSC3-207ENST00000490516 SCN7AQ01118 1682 aa18.95■□□□□ 0.62
EXOSC3-207ENST00000490516 PNMA8AQ86V59 439 aaPredicted RBP18.95■□□□□ 0.62
EXOSC3-207ENST00000490516 CNKSR1Q969H4 720 aa18.95■□□□□ 0.62
EXOSC3-207ENST00000490516 ECE1P42892 770 aa18.94■□□□□ 0.62
EXOSC3-207ENST00000490516 AOC2O75106 756 aa18.93■□□□□ 0.62
EXOSC3-207ENST00000490516 SOGA3Q5TF21 947 aa18.93■□□□□ 0.62
EXOSC3-207ENST00000490516 STYK1Q6J9G0 422 aa18.93■□□□□ 0.62
EXOSC3-207ENST00000490516 SLC52A2Q9HAB3 445 aa18.93■□□□□ 0.62
EXOSC3-207ENST00000490516 ZNF277Q9NRM2 450 aaPredicted RBP18.93■□□□□ 0.62
EXOSC3-207ENST00000490516 SRGNP10124 158 aa18.92■□□□□ 0.62
EXOSC3-207ENST00000490516 DGKZQ13574 1117 aa18.91■□□□□ 0.62
EXOSC3-207ENST00000490516 C7orf43Q8WVR3 580 aa18.91■□□□□ 0.62
EXOSC3-207ENST00000490516 LGR6Q9HBX8 967 aa18.91■□□□□ 0.62
EXOSC3-207ENST00000490516 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-207ENST00000490516 CDCA8Q53HL2 280 aa18.9■□□□□ 0.62
EXOSC3-207ENST00000490516 MASTLQ96GX5 879 aa18.9■□□□□ 0.62
EXOSC3-207ENST00000490516 UBR2Q8IWV8 1755 aa18.9■□□□□ 0.62
EXOSC3-207ENST00000490516 CCDC93Q567U6 631 aa18.89■□□□□ 0.61
EXOSC3-207ENST00000490516 CST9Q5W186 159 aa18.89■□□□□ 0.61
EXOSC3-207ENST00000490516 OLFM4Q6UX06 510 aa18.89■□□□□ 0.61
EXOSC3-207ENST00000490516 CNBD1Q8NA66 436 aa18.89■□□□□ 0.61
EXOSC3-207ENST00000490516 NPHP1O15259 732 aa18.88■□□□□ 0.61
EXOSC3-207ENST00000490516 FKBP4Q02790 459 aaKnown RBP eCLIP18.88■□□□□ 0.61
EXOSC3-207ENST00000490516 TBC1D2BQ9UPU7 963 aa18.88■□□□□ 0.61
EXOSC3-207ENST00000490516 MRC1P22897 1456 aa18.88■□□□□ 0.61
EXOSC3-207ENST00000490516 A0A087WZG4 1122 aa18.87■□□□□ 0.61
EXOSC3-207ENST00000490516 FZD9O00144 591 aa18.87■□□□□ 0.61
EXOSC3-207ENST00000490516 TRAF5O00463 557 aa18.87■□□□□ 0.61
EXOSC3-207ENST00000490516 MAP2K2P36507 400 aa18.87■□□□□ 0.61
EXOSC3-207ENST00000490516 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
EXOSC3-207ENST00000490516 TLL2Q9Y6L7 1015 aa18.87■□□□□ 0.61
EXOSC3-207ENST00000490516 SULT6B1Q6IMI4 303 aa18.86■□□□□ 0.61
EXOSC3-207ENST00000490516 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
EXOSC3-207ENST00000490516 GPC2Q8N158 579 aa18.86■□□□□ 0.61
EXOSC3-207ENST00000490516 SOX10P56693 466 aa18.85■□□□□ 0.61
EXOSC3-207ENST00000490516 ST5P78524 1137 aa18.85■□□□□ 0.61
EXOSC3-207ENST00000490516 AKAP4Q5JQC9 854 aa18.85■□□□□ 0.61
EXOSC3-207ENST00000490516 SETDB2Q96T68 719 aa18.85■□□□□ 0.61
EXOSC3-207ENST00000490516 RNMTO43148 476 aaKnown RBP18.84■□□□□ 0.61
EXOSC3-207ENST00000490516 CA12O43570 354 aa18.84■□□□□ 0.61
EXOSC3-207ENST00000490516 BCORQ6W2J9 1755 aa18.83■□□□□ 0.61
EXOSC3-207ENST00000490516 IARSP41252 1262 aaKnown RBP18.83■□□□□ 0.6
EXOSC3-207ENST00000490516 PRPF38BQ5VTL8 546 aaKnown RBP18.83■□□□□ 0.6
EXOSC3-207ENST00000490516 GJA3Q9Y6H8 435 aa18.83■□□□□ 0.6
EXOSC3-207ENST00000490516 STARD3NLO95772 234 aa18.82■□□□□ 0.6
EXOSC3-207ENST00000490516 EPS15P42566 896 aa18.82■□□□□ 0.6
EXOSC3-207ENST00000490516 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
EXOSC3-207ENST00000490516 COL4A5P29400 1685 aa18.81■□□□□ 0.6
EXOSC3-207ENST00000490516 NPR1P16066 1061 aa18.8■□□□□ 0.6
EXOSC3-207ENST00000490516 LMOD1P29536 600 aaPredicted RBP18.8■□□□□ 0.6
EXOSC3-207ENST00000490516 BRPF1P55201 1214 aaPredicted RBP18.8■□□□□ 0.6
EXOSC3-207ENST00000490516 CIAPIN1Q6FI81 312 aa18.8■□□□□ 0.6
EXOSC3-207ENST00000490516 SAPCD2Q86UD0 394 aa18.8■□□□□ 0.6
EXOSC3-207ENST00000490516 RTKN2Q8IZC4 609 aa18.8■□□□□ 0.6
EXOSC3-207ENST00000490516 CAMTA2O94983 1202 aa18.79■□□□□ 0.6
EXOSC3-207ENST00000490516 SCNN1DP51172 638 aa18.79■□□□□ 0.6
EXOSC3-207ENST00000490516 JDP2Q8WYK2 163 aa18.78■□□□□ 0.6
EXOSC3-207ENST00000490516 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
EXOSC3-207ENST00000490516 CELF2O95319 508 aaKnown RBP18.76■□□□□ 0.59
EXOSC3-207ENST00000490516 EIF6P56537 245 aaKnown RBP18.76■□□□□ 0.59
EXOSC3-207ENST00000490516 USP50Q70EL3 339 aaPredicted RBP18.76■□□□□ 0.59
EXOSC3-207ENST00000490516 NBPF5PQ86XG9 351 aaPredicted RBP18.76■□□□□ 0.59
EXOSC3-207ENST00000490516 TTC5Q8N0Z6 440 aa18.76■□□□□ 0.59
EXOSC3-207ENST00000490516 ZNF496Q96IT1 587 aaPredicted RBP18.76■□□□□ 0.59
EXOSC3-207ENST00000490516 ZIC5Q96T25 663 aa18.76■□□□□ 0.59
EXOSC3-207ENST00000490516 A1BGP04217 495 aa18.75■□□□□ 0.59
EXOSC3-207ENST00000490516 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
EXOSC3-207ENST00000490516 HEG1Q9ULI3 1381 aa18.74■□□□□ 0.59
EXOSC3-207ENST00000490516 KLRG2A4D1S0 409 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-207ENST00000490516 IL13P35225 146 aa18.74■□□□□ 0.59
EXOSC3-207ENST00000490516 DZIP3Q86Y13 1208 aaKnown RBP18.73■□□□□ 0.59
EXOSC3-207ENST00000490516 HHIPL1Q96JK4 782 aa18.73■□□□□ 0.59
EXOSC3-207ENST00000490516 PSMD1Q99460 953 aa18.73■□□□□ 0.59
EXOSC3-207ENST00000490516 NPM2Q86SE8 214 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-207ENST00000490516 GLIS2Q9BZE0 524 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-207ENST00000490516 SIPA1L3O60292 1781 aaPredicted RBP18.71■□□□□ 0.59
EXOSC3-207ENST00000490516 MTHFSDQ2M296 383 aaKnown RBP18.71■□□□□ 0.59
EXOSC3-207ENST00000490516 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
EXOSC3-207ENST00000490516 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
EXOSC3-207ENST00000490516 ZNF408Q9H9D4 720 aa18.71■□□□□ 0.59
EXOSC3-207ENST00000490516 HMOX1P09601 288 aa18.7■□□□□ 0.58
EXOSC3-207ENST00000490516 ALDH1B1P30837 517 aa18.7■□□□□ 0.58
EXOSC3-207ENST00000490516 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
EXOSC3-207ENST00000490516 FAM177BA6PVY3 158 aa18.69■□□□□ 0.58
EXOSC3-207ENST00000490516 NOGQ13253 232 aa18.69■□□□□ 0.58
EXOSC3-207ENST00000490516 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
EXOSC3-207ENST00000490516 TPTE2Q6XPS3 522 aa18.68■□□□□ 0.58
EXOSC3-207ENST00000490516 SLC51AQ86UW1 340 aa18.68■□□□□ 0.58
EXOSC3-207ENST00000490516 LARGE2Q8N3Y3 721 aa18.68■□□□□ 0.58
EXOSC3-207ENST00000490516 ADARB2Q9NS39 739 aaKnown RBP18.68■□□□□ 0.58
EXOSC3-207ENST00000490516 AKAP11Q9UKA4 1901 aa18.68■□□□□ 0.58
EXOSC3-207ENST00000490516 MORC1Q86VD1 984 aa18.67■□□□□ 0.58
EXOSC3-207ENST00000490516 GPRC5DQ9NZD1 345 aa18.67■□□□□ 0.58
EXOSC3-207ENST00000490516 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
EXOSC3-207ENST00000490516 NIP7Q9Y221 180 aaKnown RBP eCLIP18.65■□□□□ 0.58
EXOSC3-207ENST00000490516 FMNL2Q96PY5 1086 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms