RNA–Protein interactions for RNA: ENST00000490388.2

VAV3-206, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene VAV3, Length 2,271 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-206ENST00000490388 C9orf78Q9NZ63 289 aaPredicted RBP12.35□□□□□ -0.43
VAV3-206ENST00000490388 SMC3Q9UQE7 1217 aa12.35□□□□□ -0.43
VAV3-206ENST00000490388 NFAT5O94916 1531 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 STX6O43752 255 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 PTMAP06454 111 aaKnown RBP12.34□□□□□ -0.43
VAV3-206ENST00000490388 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
VAV3-206ENST00000490388 MTX1Q13505 466 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 CNPY2Q9Y2B0 182 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
VAV3-206ENST00000490388 SYT1P21579 422 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 TERF1P54274 439 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 GLIPR1L2Q4G1C9 344 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 CCDC183Q5T5S1 534 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 ECHDC1Q9NTX5 307 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 MAP3K2Q9Y2U5 619 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 ATP6V1DQ9Y5K8 247 aa12.34□□□□□ -0.43
VAV3-206ENST00000490388 CRYBG1Q9Y4K1 1723 aa12.33□□□□□ -0.44
VAV3-206ENST00000490388 ALDH1L1O75891 902 aa12.33□□□□□ -0.44
VAV3-206ENST00000490388 CPA1P15085 419 aa12.33□□□□□ -0.44
VAV3-206ENST00000490388 PSME1Q06323 249 aa12.33□□□□□ -0.44
VAV3-206ENST00000490388 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.44
VAV3-206ENST00000490388 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
VAV3-206ENST00000490388 ERC1Q8IUD2 1116 aa12.33□□□□□ -0.44
VAV3-206ENST00000490388 LRRC59Q96AG4 307 aaKnown RBP12.33□□□□□ -0.44
VAV3-206ENST00000490388 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
VAV3-206ENST00000490388 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
VAV3-206ENST00000490388 SETD1BQ9UPS6 1966 aaKnown RBP12.33□□□□□ -0.44
VAV3-206ENST00000490388 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 F13A1P00488 732 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
VAV3-206ENST00000490388 ADGRL3Q9HAR2 1447 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 RNMTO43148 476 aaKnown RBP12.32□□□□□ -0.44
VAV3-206ENST00000490388 UBE2HP62256 183 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 PTH1RQ03431 593 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
VAV3-206ENST00000490388 KSR2Q6VAB6 950 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 PDRG1Q9NUG6 133 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 HYPKQ9NX55 129 aa12.32□□□□□ -0.44
VAV3-206ENST00000490388 PA2G4Q9UQ80 394 aaKnown RBP12.32□□□□□ -0.44
VAV3-206ENST00000490388 LETM1O95202 739 aaPredicted RBP12.31□□□□□ -0.44
VAV3-206ENST00000490388 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 CCDC83Q8IWF9 413 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 EVI5LQ96CN4 794 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 CYP46A1Q9Y6A2 500 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 TCHHQ07283 1943 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 FIBPO43427 364 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 LARGE1O95461 756 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 UVSSAQ2YD98 709 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 ESCO1Q5FWF5 840 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 AACSQ86V21 672 aa12.31□□□□□ -0.44
VAV3-206ENST00000490388 ZSCAN31Q96LW9 406 aaPredicted RBP12.31□□□□□ -0.44
VAV3-206ENST00000490388 GIGYF1O75420 1035 aaPredicted RBP12.3□□□□□ -0.44
VAV3-206ENST00000490388 ZKSCAN1P17029 563 aaPredicted RBP12.3□□□□□ -0.44
VAV3-206ENST00000490388 GJB2P29033 226 aa12.3□□□□□ -0.44
VAV3-206ENST00000490388 CWF19L2Q2TBE0 894 aaKnown RBP12.3□□□□□ -0.44
VAV3-206ENST00000490388 ADCK5Q3MIX3 580 aa12.3□□□□□ -0.44
VAV3-206ENST00000490388 RBM33Q96EV2 1170 aaKnown RBP12.3□□□□□ -0.44
VAV3-206ENST00000490388 TM6SF1Q9BZW5 370 aa12.3□□□□□ -0.44
VAV3-206ENST00000490388 SH2B1Q9NRF2 756 aaPredicted RBP12.3□□□□□ -0.44
VAV3-206ENST00000490388 NCAPD2Q15021 1401 aa12.3□□□□□ -0.44
VAV3-206ENST00000490388 RGPD2P0DJD1 1756 aa12.3□□□□□ -0.44
VAV3-206ENST00000490388 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
VAV3-206ENST00000490388 ZNF142P52746 1687 aaPredicted RBP12.29□□□□□ -0.44
VAV3-206ENST00000490388 KCNJ4P48050 445 aa12.29□□□□□ -0.44
VAV3-206ENST00000490388 CCDC171Q6TFL3 1326 aa12.29□□□□□ -0.44
VAV3-206ENST00000490388 PXDNQ92626 1479 aa12.29□□□□□ -0.44
VAV3-206ENST00000490388 HIP1O00291 1037 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 G3BP1Q13283 466 aaKnown RBP eCLIP12.28□□□□□ -0.44
VAV3-206ENST00000490388 KCNB2Q92953 911 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 GRM8O00222 908 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 DDX58O95786 925 aaKnown RBP12.28□□□□□ -0.44
VAV3-206ENST00000490388 KIAA2012Q0VF49 1180 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 SUCLG2Q96I99 432 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 USP25Q9UHP3 1055 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
VAV3-206ENST00000490388 RBM8AQ9Y5S9 174 aaKnown RBP12.28□□□□□ -0.44
VAV3-206ENST00000490388 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
VAV3-206ENST00000490388 PRAMEF22A3QJZ6 481 aa12.27□□□□□ -0.44
VAV3-206ENST00000490388 VPS37CA5D8V6 355 aaPredicted RBP12.27□□□□□ -0.44
VAV3-206ENST00000490388 HCLS1P14317 486 aaPredicted RBP12.27□□□□□ -0.44
VAV3-206ENST00000490388 DNM1Q05193 864 aaKnown RBP12.27□□□□□ -0.44
VAV3-206ENST00000490388 CREB3L3Q68CJ9 461 aa12.27□□□□□ -0.44
VAV3-206ENST00000490388 PHRF1Q9P1Y6 1649 aaKnown RBP12.27□□□□□ -0.44
VAV3-206ENST00000490388 HEG1Q9ULI3 1381 aa12.27□□□□□ -0.45
VAV3-206ENST00000490388 UQCRHLA0A096LP55 91 aa12.27□□□□□ -0.45
VAV3-206ENST00000490388 GCP02774 474 aa12.27□□□□□ -0.45
VAV3-206ENST00000490388 UQCRHP07919 91 aa12.27□□□□□ -0.45
VAV3-206ENST00000490388 AIMP1Q12904 312 aaKnown RBP12.27□□□□□ -0.45
VAV3-206ENST00000490388 NMIQ13287 307 aaPredicted RBP12.27□□□□□ -0.45
VAV3-206ENST00000490388 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
VAV3-206ENST00000490388 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
VAV3-206ENST00000490388 FAM227BQ96M60 508 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms