RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 DBF4Q9UBU7 674 aaPredicted RBP18.59■□□□□ 0.57
SRGAP3-208ENST00000490348 TBC1D9BQ66K14 1250 aa18.58■□□□□ 0.56
SRGAP3-208ENST00000490348 NPM2Q86SE8 214 aaKnown RBP18.58■□□□□ 0.56
SRGAP3-208ENST00000490348 PPP1R1BQ9UD71 204 aaPredicted RBP18.58■□□□□ 0.56
SRGAP3-208ENST00000490348 POLRMTO00411 1230 aaKnown RBP18.57■□□□□ 0.56
SRGAP3-208ENST00000490348 XAGE3Q8WTP9 111 aa18.57■□□□□ 0.56
SRGAP3-208ENST00000490348 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
SRGAP3-208ENST00000490348 TCERG1O14776 1098 aaKnown RBP18.56■□□□□ 0.56
SRGAP3-208ENST00000490348 COPS6Q7L5N1 327 aa18.56■□□□□ 0.56
SRGAP3-208ENST00000490348 FHDC1Q9C0D6 1143 aaPredicted RBP18.56■□□□□ 0.56
SRGAP3-208ENST00000490348 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
SRGAP3-208ENST00000490348 ZBTB3Q9H5J0 574 aa18.55■□□□□ 0.56
SRGAP3-208ENST00000490348 ERVV-1B6SEH8 477 aa18.55■□□□□ 0.56
SRGAP3-208ENST00000490348 AIMP1Q12904 312 aaKnown RBP18.55■□□□□ 0.56
SRGAP3-208ENST00000490348 CLEC4GQ6UXB4 293 aa18.55■□□□□ 0.56
SRGAP3-208ENST00000490348 BICDL1Q6ZP65 573 aa18.55■□□□□ 0.56
SRGAP3-208ENST00000490348 PHAXQ9H814 394 aaKnown RBP18.55■□□□□ 0.56
SRGAP3-208ENST00000490348 HYPKQ9NX55 129 aa18.55■□□□□ 0.56
SRGAP3-208ENST00000490348 RGL2O15211 777 aa18.54■□□□□ 0.56
SRGAP3-208ENST00000490348 KIF6Q6ZMV9 814 aa18.54■□□□□ 0.56
SRGAP3-208ENST00000490348 PARP3Q9Y6F1 533 aa18.53■□□□□ 0.56
SRGAP3-208ENST00000490348 ZBED9Q6R2W3 1325 aa18.52■□□□□ 0.56
SRGAP3-208ENST00000490348 SYT17Q9BSW7 474 aa18.52■□□□□ 0.56
SRGAP3-208ENST00000490348 NRXN2Q9P2S2 1712 aa18.52■□□□□ 0.56
SRGAP3-208ENST00000490348 NUP98P52948 1817 aa18.52■□□□□ 0.55
SRGAP3-208ENST00000490348 ZNF652Q9Y2D9 606 aa18.51■□□□□ 0.55
SRGAP3-208ENST00000490348 C10orf71Q711Q0 1435 aa18.51■□□□□ 0.55
SRGAP3-208ENST00000490348 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
SRGAP3-208ENST00000490348 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
SRGAP3-208ENST00000490348 SLC4A2P04920 1241 aa18.51■□□□□ 0.55
SRGAP3-208ENST00000490348 GIGYF2Q6Y7W6 1299 aaKnown RBP18.51■□□□□ 0.55
SRGAP3-208ENST00000490348 G2E3Q7L622 706 aa18.51■□□□□ 0.55
SRGAP3-208ENST00000490348 NLGN2Q8NFZ4 835 aa18.51■□□□□ 0.55
SRGAP3-208ENST00000490348 CARMIL3Q8ND23 1372 aa18.5■□□□□ 0.55
SRGAP3-208ENST00000490348 SERPINB2P05120 415 aa18.5■□□□□ 0.55
SRGAP3-208ENST00000490348 KLHL34Q8N239 644 aa18.5■□□□□ 0.55
SRGAP3-208ENST00000490348 SETDB2Q96T68 719 aa18.5■□□□□ 0.55
SRGAP3-208ENST00000490348 STK31Q9BXU1 1019 aa18.5■□□□□ 0.55
SRGAP3-208ENST00000490348 CHMP4AQ9BY43 222 aa18.5■□□□□ 0.55
SRGAP3-208ENST00000490348 NIP7Q9Y221 180 aaKnown RBP eCLIP18.5■□□□□ 0.55
SRGAP3-208ENST00000490348 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
SRGAP3-208ENST00000490348 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
SRGAP3-208ENST00000490348 PLBD2Q8NHP8 589 aa18.49■□□□□ 0.55
SRGAP3-208ENST00000490348 CD2APQ9Y5K6 639 aa18.49■□□□□ 0.55
SRGAP3-208ENST00000490348 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
SRGAP3-208ENST00000490348 ZNF34Q8IZ26 560 aa18.48■□□□□ 0.55
SRGAP3-208ENST00000490348 GPTP24298 496 aa18.47■□□□□ 0.55
SRGAP3-208ENST00000490348 PRR5LQ6MZQ0 368 aa18.47■□□□□ 0.55
SRGAP3-208ENST00000490348 CCDC24Q8N4L8 307 aa18.47■□□□□ 0.55
SRGAP3-208ENST00000490348 KIAA1551Q9HCM1 1747 aa18.46■□□□□ 0.55
SRGAP3-208ENST00000490348 ARFGEF2Q9Y6D5 1785 aa18.46■□□□□ 0.55
SRGAP3-208ENST00000490348 ADCY9O60503 1353 aa18.46■□□□□ 0.55
SRGAP3-208ENST00000490348 FLIIQ13045 1269 aa18.46■□□□□ 0.55
SRGAP3-208ENST00000490348 TCIRG1Q13488 830 aa18.45■□□□□ 0.54
SRGAP3-208ENST00000490348 SUSD4Q5VX71 490 aa18.45■□□□□ 0.54
SRGAP3-208ENST00000490348 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
SRGAP3-208ENST00000490348 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
SRGAP3-208ENST00000490348 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
SRGAP3-208ENST00000490348 NBPF5PQ86XG9 351 aaPredicted RBP18.44■□□□□ 0.54
SRGAP3-208ENST00000490348 SSH1Q8WYL5 1049 aa18.44■□□□□ 0.54
SRGAP3-208ENST00000490348 ANKRD36CQ5JPF3 1778 aa18.44■□□□□ 0.54
SRGAP3-208ENST00000490348 PI4KAP2A4QPH2 592 aa18.43■□□□□ 0.54
SRGAP3-208ENST00000490348 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
SRGAP3-208ENST00000490348 PI4KAP1Q8N8J0 262 aa18.43■□□□□ 0.54
SRGAP3-208ENST00000490348 CNBD1Q8NA66 436 aa18.43■□□□□ 0.54
SRGAP3-208ENST00000490348 ATP5J2-PTCD1G3V325 749 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 NTSR2O95665 410 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 KSR2Q6VAB6 950 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 NLRP10Q86W26 655 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 MRPL50Q8N5N7 158 aaKnown RBP18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 ZNF428Q96B54 188 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 ISCA1Q9BUE6 129 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 BCL2L13Q9BXK5 485 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 ANKRD31Q8N7Z5 1873 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 A0A0G2JLW4 131 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 HSP90AB3PQ58FF7 597 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 NUTM1Q86Y26 1132 aa18.42■□□□□ 0.54
SRGAP3-208ENST00000490348 ABCC12Q96J65 1359 aa18.41■□□□□ 0.54
SRGAP3-208ENST00000490348 N4BP2Q86UW6 1770 aaPredicted RBP18.41■□□□□ 0.54
SRGAP3-208ENST00000490348 DDX58O95786 925 aaKnown RBP18.41■□□□□ 0.54
SRGAP3-208ENST00000490348 KCNA3P22001 575 aa18.41■□□□□ 0.54
SRGAP3-208ENST00000490348 PARP10Q53GL7 1025 aa18.41■□□□□ 0.54
SRGAP3-208ENST00000490348 TPTE2Q6XPS3 522 aa18.41■□□□□ 0.54
SRGAP3-208ENST00000490348 IBTKQ9P2D0 1353 aaPredicted RBP18.41■□□□□ 0.54
SRGAP3-208ENST00000490348 DPEP1P16444 411 aa18.4■□□□□ 0.54
SRGAP3-208ENST00000490348 CHRNA5P30532 468 aa18.4■□□□□ 0.54
SRGAP3-208ENST00000490348 TGFB2P61812 414 aa18.4■□□□□ 0.54
SRGAP3-208ENST00000490348 FKBP5Q13451 457 aaPredicted RBP18.4■□□□□ 0.54
SRGAP3-208ENST00000490348 MYD88Q99836 296 aa18.4■□□□□ 0.54
SRGAP3-208ENST00000490348 METTL22Q9BUU2 404 aaPredicted RBP18.4■□□□□ 0.54
SRGAP3-208ENST00000490348 IGKV5-2P06315 115 aa18.39■□□□□ 0.53
SRGAP3-208ENST00000490348 TRIM28Q13263 835 aaKnown RBP18.39■□□□□ 0.53
SRGAP3-208ENST00000490348 ALDH1L2Q3SY69 923 aa18.39■□□□□ 0.53
SRGAP3-208ENST00000490348 ERFEQ4G0M1 354 aa18.39■□□□□ 0.53
SRGAP3-208ENST00000490348 SYNE4Q8N205 404 aa18.39■□□□□ 0.53
SRGAP3-208ENST00000490348 BRIP1Q9BX63 1249 aa18.39■□□□□ 0.53
SRGAP3-208ENST00000490348 RARSP54136 660 aaKnown RBP18.38■□□□□ 0.53
SRGAP3-208ENST00000490348 ST5P78524 1137 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms