RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 CCDC87Q9NVE4 849 aa16.66■□□□□ 0.26
HLA-DOA-205ENST00000490305 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
HLA-DOA-205ENST00000490305 NUP188Q5SRE5 1749 aa16.65■□□□□ 0.26
HLA-DOA-205ENST00000490305 ITPK1Q13572 414 aa16.65■□□□□ 0.26
HLA-DOA-205ENST00000490305 PTF1AQ7RTS3 328 aa16.65■□□□□ 0.26
HLA-DOA-205ENST00000490305 MEIS3Q99687 375 aa16.65■□□□□ 0.26
HLA-DOA-205ENST00000490305 GNAI2P04899 355 aa16.64■□□□□ 0.25
HLA-DOA-205ENST00000490305 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
HLA-DOA-205ENST00000490305 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
HLA-DOA-205ENST00000490305 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
HLA-DOA-205ENST00000490305 CNTNAP4Q9C0A0 1308 aa16.64■□□□□ 0.25
HLA-DOA-205ENST00000490305 UBTFL1P0CB47 393 aaPredicted RBP16.63■□□□□ 0.25
HLA-DOA-205ENST00000490305 INTS5Q6P9B9 1019 aaKnown RBP16.63■□□□□ 0.25
HLA-DOA-205ENST00000490305 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
HLA-DOA-205ENST00000490305 MYD88Q99836 296 aa16.63■□□□□ 0.25
HLA-DOA-205ENST00000490305 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
HLA-DOA-205ENST00000490305 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
HLA-DOA-205ENST00000490305 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
HLA-DOA-205ENST00000490305 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
HLA-DOA-205ENST00000490305 TRIM37O94972 964 aa16.62■□□□□ 0.25
HLA-DOA-205ENST00000490305 IGHDP01880 384 aa16.62■□□□□ 0.25
HLA-DOA-205ENST00000490305 RC3H1Q5TC82 1133 aaKnown RBP16.62■□□□□ 0.25
HLA-DOA-205ENST00000490305 MAP3K15Q6ZN16 1313 aa16.62■□□□□ 0.25
HLA-DOA-205ENST00000490305 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
HLA-DOA-205ENST00000490305 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
HLA-DOA-205ENST00000490305 A0A087WZG4 1122 aa16.61■□□□□ 0.25
HLA-DOA-205ENST00000490305 NEURL1BA8MQ27 555 aa16.61■□□□□ 0.25
HLA-DOA-205ENST00000490305 EIF5P55010 431 aaKnown RBP16.61■□□□□ 0.25
HLA-DOA-205ENST00000490305 HSP90AB3PQ58FF7 597 aa16.61■□□□□ 0.25
HLA-DOA-205ENST00000490305 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
HLA-DOA-205ENST00000490305 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
HLA-DOA-205ENST00000490305 ERVV-1B6SEH8 477 aa16.6■□□□□ 0.25
HLA-DOA-205ENST00000490305 IGKV5-2P06315 115 aa16.6■□□□□ 0.25
HLA-DOA-205ENST00000490305 SLC27A3Q5K4L6 730 aa16.6■□□□□ 0.25
HLA-DOA-205ENST00000490305 ANKRD44Q8N8A2 993 aa16.6■□□□□ 0.25
HLA-DOA-205ENST00000490305 LINC00116Q8NCU8 138 aa16.6■□□□□ 0.25
HLA-DOA-205ENST00000490305 ZBTB3Q9H5J0 574 aa16.6■□□□□ 0.25
HLA-DOA-205ENST00000490305 GRM8O00222 908 aa16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 HMMRO75330 724 aa16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 TCIRG1Q13488 830 aa16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 GCKRQ14397 625 aa16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 CWF19L2Q2TBE0 894 aaKnown RBP16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 CEP85Q6P2H3 762 aa16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 GIGYF2Q6Y7W6 1299 aaKnown RBP16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 UTYO14607 1347 aa16.59■□□□□ 0.25
HLA-DOA-205ENST00000490305 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
HLA-DOA-205ENST00000490305 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
HLA-DOA-205ENST00000490305 ARXQ96QS3 562 aa16.58■□□□□ 0.24
HLA-DOA-205ENST00000490305 ANKRD36CQ5JPF3 1778 aa16.58■□□□□ 0.24
HLA-DOA-205ENST00000490305 NUP98P52948 1817 aa16.58■□□□□ 0.24
HLA-DOA-205ENST00000490305 RGL2O15211 777 aa16.57■□□□□ 0.24
HLA-DOA-205ENST00000490305 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
HLA-DOA-205ENST00000490305 TRIM28Q13263 835 aaKnown RBP16.57■□□□□ 0.24
HLA-DOA-205ENST00000490305 CWC25Q9NXE8 425 aaPredicted RBP16.57■□□□□ 0.24
HLA-DOA-205ENST00000490305 LRRFIP2Q9Y608 721 aaKnown RBP16.57■□□□□ 0.24
HLA-DOA-205ENST00000490305 COL15A1P39059 1388 aa16.56■□□□□ 0.24
HLA-DOA-205ENST00000490305 PLSCR1O15162 318 aa16.56■□□□□ 0.24
HLA-DOA-205ENST00000490305 RPS6KA4O75676 772 aa16.56■□□□□ 0.24
HLA-DOA-205ENST00000490305 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
HLA-DOA-205ENST00000490305 SIRT2Q8IXJ6 389 aa16.56■□□□□ 0.24
HLA-DOA-205ENST00000490305 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
HLA-DOA-205ENST00000490305 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
HLA-DOA-205ENST00000490305 ATP5J2-PTCD1G3V325 749 aa16.55■□□□□ 0.24
HLA-DOA-205ENST00000490305 SMC5Q8IY18 1101 aa16.55■□□□□ 0.24
HLA-DOA-205ENST00000490305 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
HLA-DOA-205ENST00000490305 RGPD3A6NKT7 1758 aaPredicted RBP16.54■□□□□ 0.24
HLA-DOA-205ENST00000490305 RGPD4Q7Z3J3 1758 aa16.54■□□□□ 0.24
HLA-DOA-205ENST00000490305 APBA3O96018 575 aa16.54■□□□□ 0.24
HLA-DOA-205ENST00000490305 KCNQ4P56696 695 aa16.54■□□□□ 0.24
HLA-DOA-205ENST00000490305 AK7Q96M32 723 aa16.54■□□□□ 0.24
HLA-DOA-205ENST00000490305 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
HLA-DOA-205ENST00000490305 RTCBQ9Y3I0 505 aaKnown RBP16.54■□□□□ 0.24
HLA-DOA-205ENST00000490305 BCORQ6W2J9 1755 aa16.54■□□□□ 0.24
HLA-DOA-205ENST00000490305 H7C1W4 665 aa16.53■□□□□ 0.24
HLA-DOA-205ENST00000490305 HLFQ16534 295 aa16.53■□□□□ 0.24
HLA-DOA-205ENST00000490305 DCTPP1Q9H773 170 aa16.53■□□□□ 0.24
HLA-DOA-205ENST00000490305 TNS1Q9HBL0 1735 aaKnown RBP16.53■□□□□ 0.24
HLA-DOA-205ENST00000490305 GNPATO15228 680 aa16.52■□□□□ 0.24
HLA-DOA-205ENST00000490305 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
HLA-DOA-205ENST00000490305 MTX1Q13505 466 aa16.52■□□□□ 0.24
HLA-DOA-205ENST00000490305 TXNRD1Q16881 649 aa16.52■□□□□ 0.24
HLA-DOA-205ENST00000490305 CLEC4GQ6UXB4 293 aa16.52■□□□□ 0.24
HLA-DOA-205ENST00000490305 ILDR1Q86SU0 546 aaPredicted RBP16.52■□□□□ 0.24
HLA-DOA-205ENST00000490305 ADRA2BP18089 450 aa16.51■□□□□ 0.23
HLA-DOA-205ENST00000490305 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
HLA-DOA-205ENST00000490305 LRRC4BQ9NT99 713 aa16.51■□□□□ 0.23
HLA-DOA-205ENST00000490305 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 CASP7P55210 303 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 PARP10Q53GL7 1025 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 PPP1R42Q7Z4L9 355 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 ZNF34Q8IZ26 560 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 PDZRN3Q9UPQ7 1066 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
HLA-DOA-205ENST00000490305 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
HLA-DOA-205ENST00000490305 POLA2Q14181 598 aa16.49■□□□□ 0.23
HLA-DOA-205ENST00000490305 TRAPPC3LQ5T215 181 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms