RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ZNF330Q9Y3S2 320 aaPredicted RBP22.44■■□□□ 1.18
ERCC3-207ENST00000490062 ANXA1P04083 346 aa22.43■■□□□ 1.18
ERCC3-207ENST00000490062 POLD1P28340 1107 aa22.43■■□□□ 1.18
ERCC3-207ENST00000490062 TTLL7Q6ZT98 887 aa22.43■■□□□ 1.18
ERCC3-207ENST00000490062 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
ERCC3-207ENST00000490062 STK31Q9BXU1 1019 aa22.43■■□□□ 1.18
ERCC3-207ENST00000490062 ZNF652Q9Y2D9 606 aa22.43■■□□□ 1.18
ERCC3-207ENST00000490062 ATP10DQ9P241 1426 aa22.42■■□□□ 1.18
ERCC3-207ENST00000490062 KIF6Q6ZMV9 814 aa22.42■■□□□ 1.18
ERCC3-207ENST00000490062 XAGE3Q8WTP9 111 aa22.42■■□□□ 1.18
ERCC3-207ENST00000490062 NUP98P52948 1817 aa22.41■■□□□ 1.18
ERCC3-207ENST00000490062 MSL1Q68DK7 614 aa22.41■■□□□ 1.18
ERCC3-207ENST00000490062 GIGYF2Q6Y7W6 1299 aaKnown RBP22.41■■□□□ 1.18
ERCC3-207ENST00000490062 NRXN2Q9P2S2 1712 aa22.4■■□□□ 1.18
ERCC3-207ENST00000490062 PLBD2Q8NHP8 589 aa22.4■■□□□ 1.18
ERCC3-207ENST00000490062 MMP10P09238 476 aa22.39■■□□□ 1.17
ERCC3-207ENST00000490062 NFIXQ14938 502 aa22.39■■□□□ 1.17
ERCC3-207ENST00000490062 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.17
ERCC3-207ENST00000490062 POLRMTO00411 1230 aaKnown RBP22.38■■□□□ 1.17
ERCC3-207ENST00000490062 SLC4A2P04920 1241 aa22.38■■□□□ 1.17
ERCC3-207ENST00000490062 BRPF1P55201 1214 aaPredicted RBP22.38■■□□□ 1.17
ERCC3-207ENST00000490062 HLFQ16534 295 aa22.38■■□□□ 1.17
ERCC3-207ENST00000490062 ARXQ96QS3 562 aa22.38■■□□□ 1.17
ERCC3-207ENST00000490062 PHAXQ9H814 394 aaKnown RBP22.38■■□□□ 1.17
ERCC3-207ENST00000490062 DDR1Q08345 913 aa22.37■■□□□ 1.17
ERCC3-207ENST00000490062 HSP90AB3PQ58FF7 597 aa22.37■■□□□ 1.17
ERCC3-207ENST00000490062 TBC1D9BQ66K14 1250 aa22.37■■□□□ 1.17
ERCC3-207ENST00000490062 ANKRD13DQ6ZTN6 518 aa22.37■■□□□ 1.17
ERCC3-207ENST00000490062 CARMIL3Q8ND23 1372 aa22.37■■□□□ 1.17
ERCC3-207ENST00000490062 IBTKQ9P2D0 1353 aaPredicted RBP22.36■■□□□ 1.17
ERCC3-207ENST00000490062 ANKRD36CQ5JPF3 1778 aa22.35■■□□□ 1.17
ERCC3-207ENST00000490062 DDX58O95786 925 aaKnown RBP22.35■■□□□ 1.17
ERCC3-207ENST00000490062 AIMP1Q12904 312 aaKnown RBP22.35■■□□□ 1.17
ERCC3-207ENST00000490062 FLIIQ13045 1269 aa22.35■■□□□ 1.17
ERCC3-207ENST00000490062 ZNF34Q8IZ26 560 aa22.35■■□□□ 1.17
ERCC3-207ENST00000490062 ZBTB3Q9H5J0 574 aa22.35■■□□□ 1.17
ERCC3-207ENST00000490062 PARP3Q9Y6F1 533 aa22.35■■□□□ 1.17
ERCC3-207ENST00000490062 KIF13BQ9NQT8 1826 aa22.35■■□□□ 1.17
ERCC3-207ENST00000490062 ARFGEF2Q9Y6D5 1785 aa22.35■■□□□ 1.17
ERCC3-207ENST00000490062 SETDB2Q96T68 719 aa22.34■■□□□ 1.17
ERCC3-207ENST00000490062 AFDNP55196 1824 aaKnown RBP22.34■■□□□ 1.17
ERCC3-207ENST00000490062 C10orf71Q711Q0 1435 aa22.33■■□□□ 1.17
ERCC3-207ENST00000490062 TRIM28Q13263 835 aaKnown RBP22.33■■□□□ 1.17
ERCC3-207ENST00000490062 TCIRG1Q13488 830 aa22.33■■□□□ 1.17
ERCC3-207ENST00000490062 KSR2Q6VAB6 950 aa22.33■■□□□ 1.17
ERCC3-207ENST00000490062 G2E3Q7L622 706 aa22.33■■□□□ 1.17
ERCC3-207ENST00000490062 MRPL50Q8N5N7 158 aaKnown RBP22.33■■□□□ 1.17
ERCC3-207ENST00000490062 SSH1Q8WYL5 1049 aa22.33■■□□□ 1.17
ERCC3-207ENST00000490062 TCERG1O14776 1098 aaKnown RBP22.32■■□□□ 1.16
ERCC3-207ENST00000490062 PARP10Q53GL7 1025 aa22.32■■□□□ 1.16
ERCC3-207ENST00000490062 NIP7Q9Y221 180 aaKnown RBP eCLIP22.32■■□□□ 1.16
ERCC3-207ENST00000490062 CD2APQ9Y5K6 639 aa22.32■■□□□ 1.16
ERCC3-207ENST00000490062 ADCY9O60503 1353 aa22.32■■□□□ 1.16
ERCC3-207ENST00000490062 SRCAPQ6ZRS2 3230 aa22.32■■□□□ 1.16
ERCC3-207ENST00000490062 SERPINB2P05120 415 aa22.31■■□□□ 1.16
ERCC3-207ENST00000490062 RARSP54136 660 aaKnown RBP22.31■■□□□ 1.16
ERCC3-207ENST00000490062 ISCA1Q9BUE6 129 aa22.31■■□□□ 1.16
ERCC3-207ENST00000490062 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
ERCC3-207ENST00000490062 UBN2Q6ZU65 1347 aa22.3■■□□□ 1.16
ERCC3-207ENST00000490062 PI4KAP2A4QPH2 592 aa22.29■■□□□ 1.16
ERCC3-207ENST00000490062 RIC3Q7Z5B4 369 aa22.29■■□□□ 1.16
ERCC3-207ENST00000490062 PI4KAP1Q8N8J0 262 aa22.29■■□□□ 1.16
ERCC3-207ENST00000490062 METTL22Q9BUU2 404 aaPredicted RBP22.29■■□□□ 1.16
ERCC3-207ENST00000490062 PPP1R1BQ9UD71 204 aaPredicted RBP22.29■■□□□ 1.16
ERCC3-207ENST00000490062 PTPRCP08575 1304 aa22.29■■□□□ 1.16
ERCC3-207ENST00000490062 BICDL1Q6ZP65 573 aa22.28■■□□□ 1.16
ERCC3-207ENST00000490062 RIC1Q4ADV7 1423 aa22.28■■□□□ 1.16
ERCC3-207ENST00000490062 FKBP5Q13451 457 aaPredicted RBP22.27■■□□□ 1.16
ERCC3-207ENST00000490062 NYXQ9GZU5 481 aa22.27■■□□□ 1.16
ERCC3-207ENST00000490062 PRR5LQ6MZQ0 368 aa22.26■■□□□ 1.15
ERCC3-207ENST00000490062 TPTE2Q6XPS3 522 aa22.26■■□□□ 1.15
ERCC3-207ENST00000490062 NLRP10Q86W26 655 aa22.26■■□□□ 1.15
ERCC3-207ENST00000490062 FHDC1Q9C0D6 1143 aaPredicted RBP22.26■■□□□ 1.15
ERCC3-207ENST00000490062 SMC4Q9NTJ3 1288 aa22.26■■□□□ 1.15
ERCC3-207ENST00000490062 MAP3K2Q9Y2U5 619 aa22.26■■□□□ 1.15
ERCC3-207ENST00000490062 NTSR2O95665 410 aa22.25■■□□□ 1.15
ERCC3-207ENST00000490062 SUSD4Q5VX71 490 aa22.25■■□□□ 1.15
ERCC3-207ENST00000490062 PPP1R42Q7Z4L9 355 aa22.25■■□□□ 1.15
ERCC3-207ENST00000490062 CNBD1Q8NA66 436 aa22.25■■□□□ 1.15
ERCC3-207ENST00000490062 DNAAF4Q8WXU2 420 aa22.25■■□□□ 1.15
ERCC3-207ENST00000490062 SYT17Q9BSW7 474 aa22.25■■□□□ 1.15
ERCC3-207ENST00000490062 KIAA1551Q9HCM1 1747 aa22.25■■□□□ 1.15
ERCC3-207ENST00000490062 GPTP24298 496 aa22.24■■□□□ 1.15
ERCC3-207ENST00000490062 TGFB2P61812 414 aa22.24■■□□□ 1.15
ERCC3-207ENST00000490062 NBPF5PQ86XG9 351 aaPredicted RBP22.24■■□□□ 1.15
ERCC3-207ENST00000490062 CCDC191Q8NCU4 936 aa22.24■■□□□ 1.15
ERCC3-207ENST00000490062 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
ERCC3-207ENST00000490062 KIF16BQ96L93 1317 aa22.24■■□□□ 1.15
ERCC3-207ENST00000490062 BRIP1Q9BX63 1249 aa22.23■■□□□ 1.15
ERCC3-207ENST00000490062 PDZRN3Q9UPQ7 1066 aa22.23■■□□□ 1.15
ERCC3-207ENST00000490062 PXDNLA1KZ92 1463 aa22.22■■□□□ 1.15
ERCC3-207ENST00000490062 ANKRD31Q8N7Z5 1873 aa22.22■■□□□ 1.15
ERCC3-207ENST00000490062 KLRG2A4D1S0 409 aaPredicted RBP22.22■■□□□ 1.15
ERCC3-207ENST00000490062 IGKV5-2P06315 115 aa22.22■■□□□ 1.15
ERCC3-207ENST00000490062 NEXNQ0ZGT2 675 aa22.22■■□□□ 1.15
ERCC3-207ENST00000490062 LINS1Q8NG48 757 aa22.22■■□□□ 1.15
ERCC3-207ENST00000490062 UTP14AQ9BVJ6 771 aaKnown RBP22.22■■□□□ 1.15
ERCC3-207ENST00000490062 BCL2L13Q9BXK5 485 aa22.22■■□□□ 1.15
ERCC3-207ENST00000490062 ST5P78524 1137 aa22.21■■□□□ 1.15
ERCC3-207ENST00000490062 SLC10A5Q5PT55 438 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms