RNA–Protein interactions for RNA: ENST00000490061.3

RN7SL239P-201, Transcript of RNA, 7SL, cytoplasmic 239, pseudogene, humanhuman

BASIC

Gene RN7SL239P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL239P-201ENST00000490061 PRR5LQ6MZQ0 368 aa11.57□□□□□ -0.56
RN7SL239P-201ENST00000490061 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
RN7SL239P-201ENST00000490061 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
RN7SL239P-201ENST00000490061 CAPNS2Q96L46 248 aa11.57□□□□□ -0.56
RN7SL239P-201ENST00000490061 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
RN7SL239P-201ENST00000490061 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
RN7SL239P-201ENST00000490061 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
RN7SL239P-201ENST00000490061 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
RN7SL239P-201ENST00000490061 MRC1P22897 1456 aa11.56□□□□□ -0.56
RN7SL239P-201ENST00000490061 ANKRD31Q8N7Z5 1873 aa11.55□□□□□ -0.56
RN7SL239P-201ENST00000490061 FZD9O00144 591 aa11.55□□□□□ -0.56
RN7SL239P-201ENST00000490061 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
RN7SL239P-201ENST00000490061 BRPF1P55201 1214 aaPredicted RBP11.55□□□□□ -0.56
RN7SL239P-201ENST00000490061 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
RN7SL239P-201ENST00000490061 JDP2Q8WYK2 163 aa11.55□□□□□ -0.56
RN7SL239P-201ENST00000490061 TRPM7Q96QT4 1865 aa11.55□□□□□ -0.56
RN7SL239P-201ENST00000490061 NPR1P16066 1061 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 CLEC4GQ6UXB4 293 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 USP50Q70EL3 339 aaPredicted RBP11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 GCC1Q96CN9 775 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 MCOLN1Q9GZU1 580 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 TLL2Q9Y6L7 1015 aa11.54□□□□□ -0.56
RN7SL239P-201ENST00000490061 SLX4Q8IY92 1834 aa11.53□□□□□ -0.56
RN7SL239P-201ENST00000490061 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
RN7SL239P-201ENST00000490061 EIF6P56537 245 aaKnown RBP11.53□□□□□ -0.56
RN7SL239P-201ENST00000490061 TBC1D9BQ66K14 1250 aa11.53□□□□□ -0.56
RN7SL239P-201ENST00000490061 MAP1SQ66K74 1059 aaPredicted RBP11.53□□□□□ -0.56
RN7SL239P-201ENST00000490061 BICDL1Q6ZP65 573 aa11.53□□□□□ -0.56
RN7SL239P-201ENST00000490061 PSMD1Q99460 953 aa11.53□□□□□ -0.56
RN7SL239P-201ENST00000490061 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
RN7SL239P-201ENST00000490061 SCN7AQ01118 1682 aa11.52□□□□□ -0.56
RN7SL239P-201ENST00000490061 COL11A2P13942 1736 aaPredicted RBP11.52□□□□□ -0.56
RN7SL239P-201ENST00000490061 KLRG2A4D1S0 409 aaPredicted RBP11.52□□□□□ -0.57
RN7SL239P-201ENST00000490061 CANXP27824 592 aaKnown RBP11.52□□□□□ -0.57
RN7SL239P-201ENST00000490061 ZNF652Q9Y2D9 606 aa11.52□□□□□ -0.57
RN7SL239P-201ENST00000490061 RNF123Q5XPI4 1314 aa11.52□□□□□ -0.57
RN7SL239P-201ENST00000490061 RNMTO43148 476 aaKnown RBP11.51□□□□□ -0.57
RN7SL239P-201ENST00000490061 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
RN7SL239P-201ENST00000490061 SULT6B1Q6IMI4 303 aa11.51□□□□□ -0.57
RN7SL239P-201ENST00000490061 NOGQ13253 232 aa11.5□□□□□ -0.57
RN7SL239P-201ENST00000490061 DGKZQ13574 1117 aa11.5□□□□□ -0.57
RN7SL239P-201ENST00000490061 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
RN7SL239P-201ENST00000490061 TPTE2Q6XPS3 522 aa11.5□□□□□ -0.57
RN7SL239P-201ENST00000490061 VPS33BQ9H267 617 aa11.5□□□□□ -0.57
RN7SL239P-201ENST00000490061 SAGE1Q9NXZ1 904 aa11.5□□□□□ -0.57
RN7SL239P-201ENST00000490061 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
RN7SL239P-201ENST00000490061 CASP8AP2Q9UKL3 1982 aa11.5□□□□□ -0.57
RN7SL239P-201ENST00000490061 UBR2Q8IWV8 1755 aa11.49□□□□□ -0.57
RN7SL239P-201ENST00000490061 SAPCD2Q86UD0 394 aa11.49□□□□□ -0.57
RN7SL239P-201ENST00000490061 NBPF5PQ86XG9 351 aaPredicted RBP11.49□□□□□ -0.57
RN7SL239P-201ENST00000490061 ZNF277Q9NRM2 450 aaPredicted RBP11.49□□□□□ -0.57
RN7SL239P-201ENST00000490061 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
RN7SL239P-201ENST00000490061 SLC39A6Q13433 755 aa11.48□□□□□ -0.57
RN7SL239P-201ENST00000490061 ZC3H15Q8WU90 426 aaKnown RBP11.48□□□□□ -0.57
RN7SL239P-201ENST00000490061 CDHR2Q9BYE9 1310 aa11.48□□□□□ -0.57
RN7SL239P-201ENST00000490061 LTBP1Q14766 1721 aa11.48□□□□□ -0.57
RN7SL239P-201ENST00000490061 TNRC18O15417 2968 aaPredicted RBP11.47□□□□□ -0.57
RN7SL239P-201ENST00000490061 HEG1Q9ULI3 1381 aa11.47□□□□□ -0.57
RN7SL239P-201ENST00000490061 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
RN7SL239P-201ENST00000490061 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
RN7SL239P-201ENST00000490061 SYNE4Q8N205 404 aa11.47□□□□□ -0.57
RN7SL239P-201ENST00000490061 CAMTA2O94983 1202 aa11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 GRM1Q13255 1194 aa11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 CST9Q5W186 159 aa11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 AEBP1Q8IUX7 1158 aa11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 NBPF15Q8N660 670 aa11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 FMNL2Q96PY5 1086 aa11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 LGR6Q9HBX8 967 aa11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 ADARB2Q9NS39 739 aaKnown RBP11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
RN7SL239P-201ENST00000490061 IL13P35225 146 aa11.45□□□□□ -0.58
RN7SL239P-201ENST00000490061 TEFQ10587 303 aa11.45□□□□□ -0.58
RN7SL239P-201ENST00000490061 PKN2Q16513 984 aaKnown RBP11.45□□□□□ -0.58
RN7SL239P-201ENST00000490061 ZNF790Q6PG37 636 aa11.45□□□□□ -0.58
RN7SL239P-201ENST00000490061 DZIP3Q86Y13 1208 aaKnown RBP11.45□□□□□ -0.58
RN7SL239P-201ENST00000490061 TMX4Q9H1E5 349 aaPredicted RBP11.45□□□□□ -0.58
RN7SL239P-201ENST00000490061 BCORQ6W2J9 1755 aa11.45□□□□□ -0.58
RN7SL239P-201ENST00000490061 SCNN1DP51172 638 aa11.44□□□□□ -0.58
RN7SL239P-201ENST00000490061 NYXQ9GZU5 481 aa11.44□□□□□ -0.58
RN7SL239P-201ENST00000490061 PGAP2Q9UHJ9 254 aa11.44□□□□□ -0.58
RN7SL239P-201ENST00000490061 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
RN7SL239P-201ENST00000490061 GJA3Q9Y6H8 435 aa11.44□□□□□ -0.58
RN7SL239P-201ENST00000490061 CELF2O95319 508 aaKnown RBP11.43□□□□□ -0.58
RN7SL239P-201ENST00000490061 CDC37L1Q7L3B6 337 aa11.43□□□□□ -0.58
RN7SL239P-201ENST00000490061 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
RN7SL239P-201ENST00000490061 CCDC102AQ96A19 550 aa11.43□□□□□ -0.58
RN7SL239P-201ENST00000490061 AOC2O75106 756 aa11.42□□□□□ -0.58
RN7SL239P-201ENST00000490061 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
RN7SL239P-201ENST00000490061 EPS15P42566 896 aa11.42□□□□□ -0.58
RN7SL239P-201ENST00000490061 CRY2Q49AN0 593 aa11.42□□□□□ -0.58
RN7SL239P-201ENST00000490061 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
RN7SL239P-201ENST00000490061 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
RN7SL239P-201ENST00000490061 ZNF496Q96IT1 587 aaPredicted RBP11.42□□□□□ -0.58
RN7SL239P-201ENST00000490061 GPRC5DQ9NZD1 345 aa11.42□□□□□ -0.58
RN7SL239P-201ENST00000490061 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms