RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
SDHAF3-204ENST00000489852 PRR5LQ6MZQ0 368 aa20.37■□□□□ 0.85
SDHAF3-204ENST00000489852 TESK2Q96S53 571 aa20.37■□□□□ 0.85
SDHAF3-204ENST00000489852 ZNF277Q9NRM2 450 aaPredicted RBP20.37■□□□□ 0.85
SDHAF3-204ENST00000489852 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
SDHAF3-204ENST00000489852 TRPM7Q96QT4 1865 aa20.37■□□□□ 0.85
SDHAF3-204ENST00000489852 TRAF5O00463 557 aa20.36■□□□□ 0.85
SDHAF3-204ENST00000489852 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
SDHAF3-204ENST00000489852 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
SDHAF3-204ENST00000489852 CIAPIN1Q6FI81 312 aa20.36■□□□□ 0.85
SDHAF3-204ENST00000489852 GPC2Q8N158 579 aa20.36■□□□□ 0.85
SDHAF3-204ENST00000489852 TBC1D9BQ66K14 1250 aa20.35■□□□□ 0.85
SDHAF3-204ENST00000489852 FZD9O00144 591 aa20.34■□□□□ 0.85
SDHAF3-204ENST00000489852 SRGNP10124 158 aa20.34■□□□□ 0.85
SDHAF3-204ENST00000489852 FKBP4Q02790 459 aaKnown RBP eCLIP20.34■□□□□ 0.85
SDHAF3-204ENST00000489852 C1orf141Q5JVX7 400 aa20.34■□□□□ 0.85
SDHAF3-204ENST00000489852 SAPCD2Q86UD0 394 aa20.34■□□□□ 0.85
SDHAF3-204ENST00000489852 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
SDHAF3-204ENST00000489852 MASTLQ96GX5 879 aa20.34■□□□□ 0.85
SDHAF3-204ENST00000489852 SLC24A1O60721 1099 aa20.33■□□□□ 0.85
SDHAF3-204ENST00000489852 EIF4A2Q14240 407 aaKnown RBP20.33■□□□□ 0.85
SDHAF3-204ENST00000489852 AMOTQ4VCS5 1084 aa20.33■□□□□ 0.85
SDHAF3-204ENST00000489852 ARFGEF2Q9Y6D5 1785 aa20.32■□□□□ 0.84
SDHAF3-204ENST00000489852 NPHP1O15259 732 aa20.32■□□□□ 0.84
SDHAF3-204ENST00000489852 LMOD1P29536 600 aaPredicted RBP20.32■□□□□ 0.84
SDHAF3-204ENST00000489852 C7orf43Q8WVR3 580 aa20.32■□□□□ 0.84
SDHAF3-204ENST00000489852 HABP4Q5JVS0 413 aaKnown RBP20.31■□□□□ 0.84
SDHAF3-204ENST00000489852 HHIPL1Q96JK4 782 aa20.31■□□□□ 0.84
SDHAF3-204ENST00000489852 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
SDHAF3-204ENST00000489852 GJA3Q9Y6H8 435 aa20.3■□□□□ 0.84
SDHAF3-204ENST00000489852 IARSP41252 1262 aaKnown RBP20.29■□□□□ 0.84
SDHAF3-204ENST00000489852 ST5P78524 1137 aa20.29■□□□□ 0.84
SDHAF3-204ENST00000489852 CNBD1Q8NA66 436 aa20.29■□□□□ 0.84
SDHAF3-204ENST00000489852 A0A087WZG4 1122 aa20.28■□□□□ 0.84
SDHAF3-204ENST00000489852 CELF2O95319 508 aaKnown RBP20.28■□□□□ 0.84
SDHAF3-204ENST00000489852 USP50Q70EL3 339 aaPredicted RBP20.28■□□□□ 0.84
SDHAF3-204ENST00000489852 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
SDHAF3-204ENST00000489852 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
SDHAF3-204ENST00000489852 EPS15P42566 896 aa20.27■□□□□ 0.84
SDHAF3-204ENST00000489852 JDP2Q8WYK2 163 aa20.27■□□□□ 0.84
SDHAF3-204ENST00000489852 NOGQ13253 232 aa20.26■□□□□ 0.83
SDHAF3-204ENST00000489852 SCNN1DP51172 638 aa20.25■□□□□ 0.83
SDHAF3-204ENST00000489852 EIF5P55010 431 aaKnown RBP20.25■□□□□ 0.83
SDHAF3-204ENST00000489852 EIF6P56537 245 aaKnown RBP20.25■□□□□ 0.83
SDHAF3-204ENST00000489852 SLC39A6Q13433 755 aa20.25■□□□□ 0.83
SDHAF3-204ENST00000489852 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
SDHAF3-204ENST00000489852 SYNE4Q8N205 404 aa20.25■□□□□ 0.83
SDHAF3-204ENST00000489852 ZIC5Q96T25 663 aa20.25■□□□□ 0.83
SDHAF3-204ENST00000489852 SETDB2Q96T68 719 aa20.25■□□□□ 0.83
SDHAF3-204ENST00000489852 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
SDHAF3-204ENST00000489852 SLC52A2Q9HAB3 445 aa20.23■□□□□ 0.83
SDHAF3-204ENST00000489852 SCN11AQ9UI33 1791 aa20.22■□□□□ 0.83
SDHAF3-204ENST00000489852 NPR1P16066 1061 aa20.22■□□□□ 0.83
SDHAF3-204ENST00000489852 SAGE1Q9NXZ1 904 aa20.22■□□□□ 0.83
SDHAF3-204ENST00000489852 TBC1D2BQ9UPU7 963 aa20.22■□□□□ 0.83
SDHAF3-204ENST00000489852 CTU1Q7Z7A3 348 aaKnown RBP20.21■□□□□ 0.83
SDHAF3-204ENST00000489852 VSIG10Q8N0Z9 540 aa20.21■□□□□ 0.83
SDHAF3-204ENST00000489852 ZNF408Q9H9D4 720 aa20.21■□□□□ 0.83
SDHAF3-204ENST00000489852 SCN7AQ01118 1682 aa20.2■□□□□ 0.82
SDHAF3-204ENST00000489852 STARD3NLO95772 234 aa20.2■□□□□ 0.82
SDHAF3-204ENST00000489852 HPS5Q9UPZ3 1129 aa20.2■□□□□ 0.82
SDHAF3-204ENST00000489852 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
SDHAF3-204ENST00000489852 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
SDHAF3-204ENST00000489852 GLIS2Q9BZE0 524 aaPredicted RBP20.19■□□□□ 0.82
SDHAF3-204ENST00000489852 BCORQ6W2J9 1755 aa20.18■□□□□ 0.82
SDHAF3-204ENST00000489852 TRPA1O75762 1119 aa20.17■□□□□ 0.82
SDHAF3-204ENST00000489852 AEBP1Q8IUX7 1158 aa20.17■□□□□ 0.82
SDHAF3-204ENST00000489852 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
SDHAF3-204ENST00000489852 ADARB2Q9NS39 739 aaKnown RBP20.17■□□□□ 0.82
SDHAF3-204ENST00000489852 TNNT2P45379 298 aaPredicted RBP20.16■□□□□ 0.82
SDHAF3-204ENST00000489852 FXR1P51114 621 aaKnown RBP eCLIP20.16■□□□□ 0.82
SDHAF3-204ENST00000489852 PSMD1Q99460 953 aa20.16■□□□□ 0.82
SDHAF3-204ENST00000489852 RNF186Q9NXI6 227 aa20.16■□□□□ 0.82
SDHAF3-204ENST00000489852 HUNKP57058 714 aa20.15■□□□□ 0.82
SDHAF3-204ENST00000489852 ALDH1B1P30837 517 aa20.14■□□□□ 0.81
SDHAF3-204ENST00000489852 NBPF5PQ86XG9 351 aaPredicted RBP20.14■□□□□ 0.81
SDHAF3-204ENST00000489852 COL4A5P29400 1685 aa20.13■□□□□ 0.81
SDHAF3-204ENST00000489852 KLRG2A4D1S0 409 aaPredicted RBP20.13■□□□□ 0.81
SDHAF3-204ENST00000489852 DLL1O00548 723 aa20.13■□□□□ 0.81
SDHAF3-204ENST00000489852 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
SDHAF3-204ENST00000489852 CAMTA2O94983 1202 aa20.12■□□□□ 0.81
SDHAF3-204ENST00000489852 IL6STP40189 918 aaPredicted RBP20.12■□□□□ 0.81
SDHAF3-204ENST00000489852 KIF23Q02241 960 aaPredicted RBP20.12■□□□□ 0.81
SDHAF3-204ENST00000489852 LARGE2Q8N3Y3 721 aa20.12■□□□□ 0.81
SDHAF3-204ENST00000489852 GPRC5DQ9NZD1 345 aa20.12■□□□□ 0.81
SDHAF3-204ENST00000489852 FAM155AB1AL88 458 aaPredicted RBP20.11■□□□□ 0.81
SDHAF3-204ENST00000489852 RNMTO43148 476 aaKnown RBP20.11■□□□□ 0.81
SDHAF3-204ENST00000489852 PKN2Q16513 984 aaKnown RBP20.11■□□□□ 0.81
SDHAF3-204ENST00000489852 CDCA8Q53HL2 280 aa20.11■□□□□ 0.81
SDHAF3-204ENST00000489852 PGAP2Q9UHJ9 254 aa20.11■□□□□ 0.81
SDHAF3-204ENST00000489852 MRC1P22897 1456 aa20.11■□□□□ 0.81
SDHAF3-204ENST00000489852 SULT6B1Q6IMI4 303 aa20.1■□□□□ 0.81
SDHAF3-204ENST00000489852 RGMBQ6NW40 437 aa20.1■□□□□ 0.81
SDHAF3-204ENST00000489852 CDC37L1Q7L3B6 337 aa20.1■□□□□ 0.81
SDHAF3-204ENST00000489852 AKAP11Q9UKA4 1901 aa20.1■□□□□ 0.81
SDHAF3-204ENST00000489852 SNED1Q8TER0 1413 aa20.09■□□□□ 0.81
SDHAF3-204ENST00000489852 CC2D2BQ6DHV5 1058 aa20.08■□□□□ 0.81
SDHAF3-204ENST00000489852 TTC5Q8N0Z6 440 aa20.08■□□□□ 0.81
SDHAF3-204ENST00000489852 ZC3H15Q8WU90 426 aaKnown RBP20.08■□□□□ 0.81
SDHAF3-204ENST00000489852 CCDC102AQ96A19 550 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms