RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 MASTLQ96GX5 879 aa25.84■■□□□ 1.73
APTX-229ENST00000489583 USP16Q9Y5T5 823 aa25.84■■□□□ 1.73
APTX-229ENST00000489583 SCN7AQ01118 1682 aa25.83■■□□□ 1.73
APTX-229ENST00000489583 SIPA1L3O60292 1781 aaPredicted RBP25.82■■□□□ 1.72
APTX-229ENST00000489583 GTF2E1P29083 439 aaPredicted RBP25.82■■□□□ 1.72
APTX-229ENST00000489583 HTRA3P83110 453 aa25.82■■□□□ 1.72
APTX-229ENST00000489583 TPTE2Q6XPS3 522 aa25.82■■□□□ 1.72
APTX-229ENST00000489583 PIP4K2AP48426 406 aaPredicted RBP25.8■■□□□ 1.72
APTX-229ENST00000489583 TAF7Q15545 349 aaPredicted RBP25.8■■□□□ 1.72
APTX-229ENST00000489583 PRPF40BQ6NWY9 871 aaKnown RBP25.8■■□□□ 1.72
APTX-229ENST00000489583 SRGNP10124 158 aa25.79■■□□□ 1.72
APTX-229ENST00000489583 NIP7Q9Y221 180 aaKnown RBP eCLIP25.79■■□□□ 1.72
APTX-229ENST00000489583 LTBP3Q9NS15 1303 aa25.79■■□□□ 1.72
APTX-229ENST00000489583 PRELPP51888 382 aa25.78■■□□□ 1.72
APTX-229ENST00000489583 PNISRQ8TF01 805 aaKnown RBP25.78■■□□□ 1.72
APTX-229ENST00000489583 TIAM2Q8IVF5 1701 aa25.77■■□□□ 1.72
APTX-229ENST00000489583 NPR1P16066 1061 aa25.77■■□□□ 1.72
APTX-229ENST00000489583 DCTN1Q14203 1278 aa25.77■■□□□ 1.72
APTX-229ENST00000489583 PNNQ9H307 717 aaKnown RBP25.77■■□□□ 1.72
APTX-229ENST00000489583 RGL2O15211 777 aa25.76■■□□□ 1.71
APTX-229ENST00000489583 CCDC93Q567U6 631 aa25.76■■□□□ 1.71
APTX-229ENST00000489583 JMYQ8N9B5 988 aa25.76■■□□□ 1.71
APTX-229ENST00000489583 PRAMEF22A3QJZ6 481 aa25.75■■□□□ 1.71
APTX-229ENST00000489583 IQCA1LA6NCM1 817 aa25.74■■□□□ 1.71
APTX-229ENST00000489583 FAM177BA6PVY3 158 aa25.74■■□□□ 1.71
APTX-229ENST00000489583 ANKRD31Q8N7Z5 1873 aa25.74■■□□□ 1.71
APTX-229ENST00000489583 CCDC88AQ3V6T2 1871 aa25.73■■□□□ 1.71
APTX-229ENST00000489583 ALDH1B1P30837 517 aa25.73■■□□□ 1.71
APTX-229ENST00000489583 NYXQ9GZU5 481 aa25.72■■□□□ 1.71
APTX-229ENST00000489583 MAPK8IP3Q9UPT6 1336 aa25.71■■□□□ 1.71
APTX-229ENST00000489583 KIF6Q6ZMV9 814 aa25.71■■□□□ 1.71
APTX-229ENST00000489583 RTKN2Q8IZC4 609 aa25.71■■□□□ 1.71
APTX-229ENST00000489583 BCORQ6W2J9 1755 aa25.7■■□□□ 1.7
APTX-229ENST00000489583 CHADLQ6NUI6 762 aa25.7■■□□□ 1.7
APTX-229ENST00000489583 NGEFQ8N5V2 710 aa25.7■■□□□ 1.7
APTX-229ENST00000489583 COL11A2P13942 1736 aaPredicted RBP25.69■■□□□ 1.7
APTX-229ENST00000489583 DDNO94850 711 aaPredicted RBP25.69■■□□□ 1.7
APTX-229ENST00000489583 MIS18AQ9NYP9 233 aa25.69■■□□□ 1.7
APTX-229ENST00000489583 FER1L6Q2WGJ9 1857 aa25.68■■□□□ 1.7
APTX-229ENST00000489583 NBPF26B4DH59 902 aa25.67■■□□□ 1.7
APTX-229ENST00000489583 FKBP4Q02790 459 aaKnown RBP eCLIP25.67■■□□□ 1.7
APTX-229ENST00000489583 NBPF10Q6P3W6 841 aaKnown RBP25.67■■□□□ 1.7
APTX-229ENST00000489583 NBPF15Q8N660 670 aa25.67■■□□□ 1.7
APTX-229ENST00000489583 POTECB2RU33 542 aa25.66■■□□□ 1.7
APTX-229ENST00000489583 RRP7AQ9Y3A4 280 aaKnown RBP25.66■■□□□ 1.7
APTX-229ENST00000489583 SLX4Q8IY92 1834 aa25.65■■□□□ 1.7
APTX-229ENST00000489583 ERVV-1B6SEH8 477 aa25.65■■□□□ 1.7
APTX-229ENST00000489583 DICER1Q9UPY3 1922 aaKnown RBP25.65■■□□□ 1.7
APTX-229ENST00000489583 KLRG2A4D1S0 409 aaPredicted RBP25.64■■□□□ 1.7
APTX-229ENST00000489583 NFE2L2Q16236 605 aa25.64■■□□□ 1.7
APTX-229ENST00000489583 RPGRQ92834 1020 aaKnown RBP25.64■■□□□ 1.7
APTX-229ENST00000489583 TMX4Q9H1E5 349 aaPredicted RBP25.64■■□□□ 1.7
APTX-229ENST00000489583 CACNA1SQ13698 1873 aa25.64■■□□□ 1.69
APTX-229ENST00000489583 HLFQ16534 295 aa25.63■■□□□ 1.69
APTX-229ENST00000489583 JDP2Q8WYK2 163 aa25.63■■□□□ 1.69
APTX-229ENST00000489583 ZNF277Q9NRM2 450 aaPredicted RBP25.63■■□□□ 1.69
APTX-229ENST00000489583 CREBZFQ9NS37 354 aa25.63■■□□□ 1.69
APTX-229ENST00000489583 MYL6BP14649 208 aa25.62■■□□□ 1.69
APTX-229ENST00000489583 LDHDQ86WU2 507 aa25.62■■□□□ 1.69
APTX-229ENST00000489583 C7orf43Q8WVR3 580 aa25.62■■□□□ 1.69
APTX-229ENST00000489583 CLEC11AQ9Y240 323 aa25.62■■□□□ 1.69
APTX-229ENST00000489583 MAP3K15Q6ZN16 1313 aa25.62■■□□□ 1.69
APTX-229ENST00000489583 EAPPQ56P03 285 aaPredicted RBP25.61■■□□□ 1.69
APTX-229ENST00000489583 COL13A1Q5TAT6 717 aaPredicted RBP25.61■■□□□ 1.69
APTX-229ENST00000489583 TNS4Q8IZW8 715 aa25.61■■□□□ 1.69
APTX-229ENST00000489583 ARFGEF2Q9Y6D5 1785 aa25.61■■□□□ 1.69
APTX-229ENST00000489583 CC2D2BQ6DHV5 1058 aa25.6■■□□□ 1.69
APTX-229ENST00000489583 L3MBTL3Q96JM7 780 aaPredicted RBP25.6■■□□□ 1.69
APTX-229ENST00000489583 HACL1Q9UJ83 578 aa25.6■■□□□ 1.69
APTX-229ENST00000489583 HSPA1AP0DMV8 641 aaKnown RBP25.59■■□□□ 1.69
APTX-229ENST00000489583 HSPA1BP0DMV9 641 aaKnown RBP25.59■■□□□ 1.69
APTX-229ENST00000489583 IARSP41252 1262 aaKnown RBP25.59■■□□□ 1.69
APTX-229ENST00000489583 EIF4A1P60842 406 aaKnown RBP25.59■■□□□ 1.69
APTX-229ENST00000489583 GRIPAP1Q4V328 841 aa25.59■■□□□ 1.69
APTX-229ENST00000489583 PNMA8AQ86V59 439 aaPredicted RBP25.58■■□□□ 1.69
APTX-229ENST00000489583 NUTM1Q86Y26 1132 aa25.58■■□□□ 1.69
APTX-229ENST00000489583 SYNE4Q8N205 404 aa25.58■■□□□ 1.69
APTX-229ENST00000489583 ZBTB3Q9H5J0 574 aa25.58■■□□□ 1.69
APTX-229ENST00000489583 TAF1DQ9H5J8 278 aaPredicted RBP25.58■■□□□ 1.69
APTX-229ENST00000489583 TSPYL4Q9UJ04 414 aa25.58■■□□□ 1.69
APTX-229ENST00000489583 GPTP24298 496 aa25.57■■□□□ 1.68
APTX-229ENST00000489583 PPP1R42Q7Z4L9 355 aa25.57■■□□□ 1.68
APTX-229ENST00000489583 RBM17Q96I25 401 aaKnown RBP25.57■■□□□ 1.68
APTX-229ENST00000489583 EIF6P56537 245 aaKnown RBP25.56■■□□□ 1.68
APTX-229ENST00000489583 PLEKHF1Q96S99 279 aa25.56■■□□□ 1.68
APTX-229ENST00000489583 MKRN1Q9UHC7 482 aaKnown RBP25.56■■□□□ 1.68
APTX-229ENST00000489583 ERBB4Q15303 1308 aa25.56■■□□□ 1.68
APTX-229ENST00000489583 LAMB4A4D0S4 1761 aa25.56■■□□□ 1.68
APTX-229ENST00000489583 LMOD3Q0VAK6 560 aa25.55■■□□□ 1.68
APTX-229ENST00000489583 PSMD1Q99460 953 aa25.55■■□□□ 1.68
APTX-229ENST00000489583 THUMPD2Q9BTF0 503 aaKnown RBP25.55■■□□□ 1.68
APTX-229ENST00000489583 POTEIP0CG38 1075 aa25.54■■□□□ 1.68
APTX-229ENST00000489583 POTEJP0CG39 1038 aa25.54■■□□□ 1.68
APTX-229ENST00000489583 LMOD1P29536 600 aaPredicted RBP25.54■■□□□ 1.68
APTX-229ENST00000489583 EPHX2P34913 555 aa25.54■■□□□ 1.68
APTX-229ENST00000489583 OLFM4Q6UX06 510 aa25.54■■□□□ 1.68
APTX-229ENST00000489583 TTLL7Q6ZT98 887 aa25.54■■□□□ 1.68
APTX-229ENST00000489583 GPC2Q8N158 579 aa25.54■■□□□ 1.68
APTX-229ENST00000489583 CAPN15O75808 1086 aa25.53■■□□□ 1.68
APTX-229ENST00000489583 CRY2Q49AN0 593 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms