RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ST5P78524 1137 aa22.76■■□□□ 1.23
TOP3B-217ENST00000489581 CNKSR1Q969H4 720 aa22.76■■□□□ 1.23
TOP3B-217ENST00000489581 TAOK3Q9H2K8 898 aa22.76■■□□□ 1.23
TOP3B-217ENST00000489581 PRAMEF22A3QJZ6 481 aa22.75■■□□□ 1.23
TOP3B-217ENST00000489581 SRGNP10124 158 aa22.75■■□□□ 1.23
TOP3B-217ENST00000489581 STYK1Q6J9G0 422 aa22.75■■□□□ 1.23
TOP3B-217ENST00000489581 PRPF40BQ6NWY9 871 aaKnown RBP22.75■■□□□ 1.23
TOP3B-217ENST00000489581 RSPH6AQ9H0K4 717 aa22.75■■□□□ 1.23
TOP3B-217ENST00000489581 MASTLQ96GX5 879 aa22.74■■□□□ 1.23
TOP3B-217ENST00000489581 LTBP3Q9NS15 1303 aa22.74■■□□□ 1.23
TOP3B-217ENST00000489581 CAPN15O75808 1086 aa22.73■■□□□ 1.23
TOP3B-217ENST00000489581 DDNO94850 711 aaPredicted RBP22.73■■□□□ 1.23
TOP3B-217ENST00000489581 CFAP53Q96M91 514 aa22.73■■□□□ 1.23
TOP3B-217ENST00000489581 ARFGEF2Q9Y6D5 1785 aa22.73■■□□□ 1.23
TOP3B-217ENST00000489581 HSPA1AP0DMV8 641 aaKnown RBP22.72■■□□□ 1.23
TOP3B-217ENST00000489581 HSPA1BP0DMV9 641 aaKnown RBP22.72■■□□□ 1.23
TOP3B-217ENST00000489581 TNS4Q8IZW8 715 aa22.72■■□□□ 1.23
TOP3B-217ENST00000489581 POTEIP0CG38 1075 aa22.71■■□□□ 1.23
TOP3B-217ENST00000489581 POTEJP0CG39 1038 aa22.71■■□□□ 1.23
TOP3B-217ENST00000489581 MCM10Q7L590 875 aa22.71■■□□□ 1.23
TOP3B-217ENST00000489581 NBPF5PQ86XG9 351 aaPredicted RBP22.71■■□□□ 1.23
TOP3B-217ENST00000489581 SNRPA1P09661 255 aaKnown RBP22.7■■□□□ 1.22
TOP3B-217ENST00000489581 RTF1Q92541 710 aaKnown RBP22.7■■□□□ 1.22
TOP3B-217ENST00000489581 NUDCQ9Y266 331 aa22.7■■□□□ 1.22
TOP3B-217ENST00000489581 U2AF1L5P0DN76 240 aaPredicted RBP22.69■■□□□ 1.22
TOP3B-217ENST00000489581 U2AF1Q01081 240 aaKnown RBP eCLIP22.69■■□□□ 1.22
TOP3B-217ENST00000489581 SOGA3Q5TF21 947 aa22.69■■□□□ 1.22
TOP3B-217ENST00000489581 CHADLQ6NUI6 762 aa22.69■■□□□ 1.22
TOP3B-217ENST00000489581 CLEC4GQ6UXB4 293 aa22.69■■□□□ 1.22
TOP3B-217ENST00000489581 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
TOP3B-217ENST00000489581 ZNF652Q9Y2D9 606 aa22.68■■□□□ 1.22
TOP3B-217ENST00000489581 C7orf43Q8WVR3 580 aa22.67■■□□□ 1.22
TOP3B-217ENST00000489581 FAM177BA6PVY3 158 aa22.66■■□□□ 1.22
TOP3B-217ENST00000489581 NPR1P16066 1061 aa22.66■■□□□ 1.22
TOP3B-217ENST00000489581 NIP7Q9Y221 180 aaKnown RBP eCLIP22.66■■□□□ 1.22
TOP3B-217ENST00000489581 NBPF26B4DH59 902 aa22.65■■□□□ 1.22
TOP3B-217ENST00000489581 CCDC93Q567U6 631 aa22.65■■□□□ 1.22
TOP3B-217ENST00000489581 NBPF10Q6P3W6 841 aaKnown RBP22.65■■□□□ 1.22
TOP3B-217ENST00000489581 TPTE2Q6XPS3 522 aa22.65■■□□□ 1.22
TOP3B-217ENST00000489581 NBPF15Q8N660 670 aa22.65■■□□□ 1.22
TOP3B-217ENST00000489581 CREBZFQ9NS37 354 aa22.65■■□□□ 1.22
TOP3B-217ENST00000489581 MKRN1Q9UHC7 482 aaKnown RBP22.65■■□□□ 1.22
TOP3B-217ENST00000489581 SCN4AP35499 1836 aa22.64■■□□□ 1.22
TOP3B-217ENST00000489581 OLFM4Q6UX06 510 aa22.64■■□□□ 1.21
TOP3B-217ENST00000489581 KLRG2A4D1S0 409 aaPredicted RBP22.63■■□□□ 1.21
TOP3B-217ENST00000489581 PPP2R1AP30153 589 aa22.63■■□□□ 1.21
TOP3B-217ENST00000489581 ZNF277Q9NRM2 450 aaPredicted RBP22.63■■□□□ 1.21
TOP3B-217ENST00000489581 IQCA1LA6NCM1 817 aa22.62■■□□□ 1.21
TOP3B-217ENST00000489581 FKBP4Q02790 459 aaKnown RBP eCLIP22.62■■□□□ 1.21
TOP3B-217ENST00000489581 HLFQ16534 295 aa22.62■■□□□ 1.21
TOP3B-217ENST00000489581 MIS18AQ9NYP9 233 aa22.62■■□□□ 1.21
TOP3B-217ENST00000489581 L3MBTL3Q96JM7 780 aaPredicted RBP22.61■■□□□ 1.21
TOP3B-217ENST00000489581 TAF1DQ9H5J8 278 aaPredicted RBP22.61■■□□□ 1.21
TOP3B-217ENST00000489581 HTATSF1O43719 755 aaKnown RBP22.6■■□□□ 1.21
TOP3B-217ENST00000489581 TAF7Q15545 349 aaPredicted RBP22.6■■□□□ 1.21
TOP3B-217ENST00000489581 LDHDQ86WU2 507 aa22.6■■□□□ 1.21
TOP3B-217ENST00000489581 ZNF541Q9H0D2 1346 aa22.59■■□□□ 1.21
TOP3B-217ENST00000489581 GTF2E1P29083 439 aaPredicted RBP22.59■■□□□ 1.21
TOP3B-217ENST00000489581 NGEFQ8N5V2 710 aa22.59■■□□□ 1.21
TOP3B-217ENST00000489581 DLG5Q8TDM6 1919 aa22.59■■□□□ 1.21
TOP3B-217ENST00000489581 RGL2O15211 777 aa22.58■■□□□ 1.21
TOP3B-217ENST00000489581 EAPPQ56P03 285 aaPredicted RBP22.58■■□□□ 1.21
TOP3B-217ENST00000489581 RTKN2Q8IZC4 609 aa22.58■■□□□ 1.21
TOP3B-217ENST00000489581 NUP98P52948 1817 aa22.58■■□□□ 1.21
TOP3B-217ENST00000489581 PASKQ96RG2 1323 aa22.57■■□□□ 1.2
TOP3B-217ENST00000489581 ALDH1B1P30837 517 aa22.56■■□□□ 1.2
TOP3B-217ENST00000489581 SYNE4Q8N205 404 aa22.56■■□□□ 1.2
TOP3B-217ENST00000489581 HACL1Q9UJ83 578 aa22.56■■□□□ 1.2
TOP3B-217ENST00000489581 LAMB4A4D0S4 1761 aa22.55■■□□□ 1.2
TOP3B-217ENST00000489581 CNTNAP1P78357 1384 aa22.55■■□□□ 1.2
TOP3B-217ENST00000489581 IARSP41252 1262 aaKnown RBP22.55■■□□□ 1.2
TOP3B-217ENST00000489581 NUTM1Q86Y26 1132 aa22.55■■□□□ 1.2
TOP3B-217ENST00000489581 CLEC11AQ9Y240 323 aa22.55■■□□□ 1.2
TOP3B-217ENST00000489581 ITGBL1O95965 494 aaPredicted RBP22.54■■□□□ 1.2
TOP3B-217ENST00000489581 FZD9O00144 591 aa22.53■■□□□ 1.2
TOP3B-217ENST00000489581 EPHX2P34913 555 aa22.53■■□□□ 1.2
TOP3B-217ENST00000489581 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
TOP3B-217ENST00000489581 RNF123Q5XPI4 1314 aa22.53■■□□□ 1.2
TOP3B-217ENST00000489581 ABCC12Q96J65 1359 aa22.52■■□□□ 1.2
TOP3B-217ENST00000489581 TMEM88BA6NKF7 163 aa22.52■■□□□ 1.2
TOP3B-217ENST00000489581 FOXN1O15353 648 aa22.52■■□□□ 1.2
TOP3B-217ENST00000489581 NYXQ9GZU5 481 aa22.52■■□□□ 1.2
TOP3B-217ENST00000489581 KDM3BQ7LBC6 1761 aa22.51■■□□□ 1.19
TOP3B-217ENST00000489581 ERVV-1B6SEH8 477 aa22.51■■□□□ 1.19
TOP3B-217ENST00000489581 VEGFBP49765 207 aa22.51■■□□□ 1.19
TOP3B-217ENST00000489581 TTLL7Q6ZT98 887 aa22.51■■□□□ 1.19
TOP3B-217ENST00000489581 NEFMP07197 916 aa22.5■■□□□ 1.19
TOP3B-217ENST00000489581 GPTP24298 496 aa22.5■■□□□ 1.19
TOP3B-217ENST00000489581 CRY2Q49AN0 593 aa22.5■■□□□ 1.19
TOP3B-217ENST00000489581 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
TOP3B-217ENST00000489581 MAP3K15Q6ZN16 1313 aa22.5■■□□□ 1.19
TOP3B-217ENST00000489581 ADAMTSL1Q8N6G6 1762 aa22.5■■□□□ 1.19
TOP3B-217ENST00000489581 MYL6BP14649 208 aa22.49■■□□□ 1.19
TOP3B-217ENST00000489581 EIF4A1P60842 406 aaKnown RBP22.49■■□□□ 1.19
TOP3B-217ENST00000489581 MAP1SQ66K74 1059 aaPredicted RBP22.49■■□□□ 1.19
TOP3B-217ENST00000489581 PNMA8AQ86V59 439 aaPredicted RBP22.49■■□□□ 1.19
TOP3B-217ENST00000489581 CNTROBQ8N137 903 aa22.49■■□□□ 1.19
TOP3B-217ENST00000489581 JDP2Q8WYK2 163 aa22.49■■□□□ 1.19
TOP3B-217ENST00000489581 PSMD1Q99460 953 aa22.49■■□□□ 1.19
TOP3B-217ENST00000489581 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms