RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 ANXA1P04083 346 aa12.49□□□□□ -0.41
FDPS-214ENST00000489324 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
FDPS-214ENST00000489324 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
FDPS-214ENST00000489324 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
FDPS-214ENST00000489324 SRP68Q9UHB9 627 aaKnown RBP12.49□□□□□ -0.41
FDPS-214ENST00000489324 TM4SF1P30408 202 aa12.48□□□□□ -0.41
FDPS-214ENST00000489324 AIMP1Q12904 312 aaKnown RBP12.48□□□□□ -0.41
FDPS-214ENST00000489324 FLIIQ13045 1269 aa12.48□□□□□ -0.41
FDPS-214ENST00000489324 FKBP8Q14318 412 aa12.48□□□□□ -0.41
FDPS-214ENST00000489324 TTLL7Q6ZT98 887 aa12.48□□□□□ -0.41
FDPS-214ENST00000489324 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
FDPS-214ENST00000489324 PTPRCP08575 1304 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 TUBGCP6Q96RT7 1819 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 RARSP54136 660 aaKnown RBP12.47□□□□□ -0.41
FDPS-214ENST00000489324 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 KSR2Q6VAB6 950 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 RIC3Q7Z5B4 369 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
FDPS-214ENST00000489324 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 YTHDC1Q96MU7 727 aaKnown RBP12.47□□□□□ -0.41
FDPS-214ENST00000489324 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 PHAXQ9H814 394 aaKnown RBP12.47□□□□□ -0.41
FDPS-214ENST00000489324 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
FDPS-214ENST00000489324 PARP3Q9Y6F1 533 aa12.47□□□□□ -0.41
FDPS-214ENST00000489324 ATP10DQ9P241 1426 aa12.46□□□□□ -0.41
FDPS-214ENST00000489324 MMP10P09238 476 aa12.46□□□□□ -0.41
FDPS-214ENST00000489324 TRIM28Q13263 835 aaKnown RBP12.46□□□□□ -0.41
FDPS-214ENST00000489324 TCIRG1Q13488 830 aa12.46□□□□□ -0.41
FDPS-214ENST00000489324 NFIXQ14938 502 aa12.46□□□□□ -0.41
FDPS-214ENST00000489324 ZBTB3Q9H5J0 574 aa12.46□□□□□ -0.41
FDPS-214ENST00000489324 SMC4Q9NTJ3 1288 aa12.46□□□□□ -0.41
FDPS-214ENST00000489324 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
FDPS-214ENST00000489324 TCERG1O14776 1098 aaKnown RBP12.45□□□□□ -0.42
FDPS-214ENST00000489324 PTGER2P43116 358 aa12.45□□□□□ -0.42
FDPS-214ENST00000489324 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
FDPS-214ENST00000489324 HLFQ16534 295 aa12.45□□□□□ -0.42
FDPS-214ENST00000489324 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
FDPS-214ENST00000489324 ZNF34Q8IZ26 560 aa12.45□□□□□ -0.42
FDPS-214ENST00000489324 ARHGAP45Q92619 1136 aa12.45□□□□□ -0.42
FDPS-214ENST00000489324 CARMIL3Q8ND23 1372 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 IBTKQ9P2D0 1353 aaPredicted RBP12.44□□□□□ -0.42
FDPS-214ENST00000489324 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 PI4KAP2A4QPH2 592 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
FDPS-214ENST00000489324 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
FDPS-214ENST00000489324 NEXNQ0ZGT2 675 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 G2E3Q7L622 706 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 PI4KAP1Q8N8J0 262 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
FDPS-214ENST00000489324 NYXQ9GZU5 481 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 NIP7Q9Y221 180 aaKnown RBP eCLIP12.44□□□□□ -0.42
FDPS-214ENST00000489324 C4AP0C0L4 1744 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 SCN7AQ01118 1682 aa12.44□□□□□ -0.42
FDPS-214ENST00000489324 SERPINB2P05120 415 aa12.43□□□□□ -0.42
FDPS-214ENST00000489324 TPTE2Q6XPS3 522 aa12.43□□□□□ -0.42
FDPS-214ENST00000489324 DNAAF4Q8WXU2 420 aa12.43□□□□□ -0.42
FDPS-214ENST00000489324 ISCA1Q9BUE6 129 aa12.43□□□□□ -0.42
FDPS-214ENST00000489324 API5Q9BZZ5 524 aaKnown RBP12.43□□□□□ -0.42
FDPS-214ENST00000489324 PDZRN3Q9UPQ7 1066 aa12.43□□□□□ -0.42
FDPS-214ENST00000489324 MAP3K2Q9Y2U5 619 aa12.43□□□□□ -0.42
FDPS-214ENST00000489324 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
FDPS-214ENST00000489324 CACNA1FO60840 1977 aa12.42□□□□□ -0.42
FDPS-214ENST00000489324 DDR1Q08345 913 aa12.42□□□□□ -0.42
FDPS-214ENST00000489324 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
FDPS-214ENST00000489324 CCDC191Q8NCU4 936 aa12.42□□□□□ -0.42
FDPS-214ENST00000489324 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
FDPS-214ENST00000489324 CD2APQ9Y5K6 639 aa12.42□□□□□ -0.42
FDPS-214ENST00000489324 ADCY9O60503 1353 aa12.42□□□□□ -0.42
FDPS-214ENST00000489324 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
FDPS-214ENST00000489324 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
FDPS-214ENST00000489324 NBPF5PQ86XG9 351 aaPredicted RBP12.41□□□□□ -0.42
FDPS-214ENST00000489324 LINS1Q8NG48 757 aa12.41□□□□□ -0.42
FDPS-214ENST00000489324 UTP14AQ9BVJ6 771 aaKnown RBP12.41□□□□□ -0.42
FDPS-214ENST00000489324 LRP5O75197 1615 aa12.4□□□□□ -0.42
FDPS-214ENST00000489324 ST5P78524 1137 aa12.4□□□□□ -0.42
FDPS-214ENST00000489324 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
FDPS-214ENST00000489324 CNBD1Q8NA66 436 aa12.4□□□□□ -0.42
FDPS-214ENST00000489324 MYD88Q99836 296 aa12.4□□□□□ -0.42
FDPS-214ENST00000489324 BCL2L13Q9BXK5 485 aa12.4□□□□□ -0.42
FDPS-214ENST00000489324 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
FDPS-214ENST00000489324 NOB1Q9ULX3 412 aaKnown RBP12.4□□□□□ -0.42
FDPS-214ENST00000489324 NPHP1O15259 732 aa12.39□□□□□ -0.43
FDPS-214ENST00000489324 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
FDPS-214ENST00000489324 MS4A1P11836 297 aa12.39□□□□□ -0.43
FDPS-214ENST00000489324 GPTP24298 496 aa12.39□□□□□ -0.43
FDPS-214ENST00000489324 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
FDPS-214ENST00000489324 TGFB2P61812 414 aa12.39□□□□□ -0.43
FDPS-214ENST00000489324 SUSD4Q5VX71 490 aa12.39□□□□□ -0.43
FDPS-214ENST00000489324 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
FDPS-214ENST00000489324 BRIP1Q9BX63 1249 aa12.39□□□□□ -0.43
FDPS-214ENST00000489324 CWC25Q9NXE8 425 aaPredicted RBP12.39□□□□□ -0.43
FDPS-214ENST00000489324 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
FDPS-214ENST00000489324 BCAR3O75815 825 aa12.38□□□□□ -0.43
FDPS-214ENST00000489324 NTSR2O95665 410 aa12.38□□□□□ -0.43
FDPS-214ENST00000489324 PDE6BP35913 854 aa12.38□□□□□ -0.43
FDPS-214ENST00000489324 SLC10A5Q5PT55 438 aa12.38□□□□□ -0.43
FDPS-214ENST00000489324 BEND3Q5T5X7 828 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms