RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 SIRT2Q8IXJ6 389 aa13.72□□□□□ -0.21
COL21A1-211ENST00000488912 RREB1Q92766 1687 aa13.72□□□□□ -0.21
COL21A1-211ENST00000488912 GNAI3P08754 354 aa13.71□□□□□ -0.21
COL21A1-211ENST00000488912 ITPK1Q13572 414 aa13.71□□□□□ -0.21
COL21A1-211ENST00000488912 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
COL21A1-211ENST00000488912 LINS1Q8NG48 757 aa13.71□□□□□ -0.21
COL21A1-211ENST00000488912 ZBTB1Q9Y2K1 713 aa13.71□□□□□ -0.21
COL21A1-211ENST00000488912 ZNF330Q9Y3S2 320 aaPredicted RBP13.71□□□□□ -0.21
COL21A1-211ENST00000488912 LY75O60449 1722 aa13.71□□□□□ -0.21
COL21A1-211ENST00000488912 CEP85Q6P2H3 762 aa13.7□□□□□ -0.22
COL21A1-211ENST00000488912 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
COL21A1-211ENST00000488912 METTL22Q9BUU2 404 aaPredicted RBP13.7□□□□□ -0.22
COL21A1-211ENST00000488912 ALDH1L1O75891 902 aa13.7□□□□□ -0.22
COL21A1-211ENST00000488912 GNAI2P04899 355 aa13.7□□□□□ -0.22
COL21A1-211ENST00000488912 IGKV5-2P06315 115 aa13.7□□□□□ -0.22
COL21A1-211ENST00000488912 MYD88Q99836 296 aa13.7□□□□□ -0.22
COL21A1-211ENST00000488912 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
COL21A1-211ENST00000488912 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
COL21A1-211ENST00000488912 NEXNQ0ZGT2 675 aa13.69□□□□□ -0.22
COL21A1-211ENST00000488912 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
COL21A1-211ENST00000488912 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
COL21A1-211ENST00000488912 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
COL21A1-211ENST00000488912 LRRFIP2Q9Y608 721 aaKnown RBP13.69□□□□□ -0.22
COL21A1-211ENST00000488912 NEURL1BA8MQ27 555 aa13.68□□□□□ -0.22
COL21A1-211ENST00000488912 CRKLP46109 303 aaKnown RBP13.68□□□□□ -0.22
COL21A1-211ENST00000488912 RPAP2Q8IXW5 612 aaPredicted RBP13.68□□□□□ -0.22
COL21A1-211ENST00000488912 TAF1LQ8IZX4 1826 aa13.68□□□□□ -0.22
COL21A1-211ENST00000488912 KCNQ4P56696 695 aa13.68□□□□□ -0.22
COL21A1-211ENST00000488912 INTS5Q6P9B9 1019 aaKnown RBP13.68□□□□□ -0.22
COL21A1-211ENST00000488912 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
COL21A1-211ENST00000488912 RXRBP28702 533 aa13.67□□□□□ -0.22
COL21A1-211ENST00000488912 FAM196AQ6ZSG2 479 aa13.67□□□□□ -0.22
COL21A1-211ENST00000488912 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
COL21A1-211ENST00000488912 C9orf78Q9NZ63 289 aaPredicted RBP13.67□□□□□ -0.22
COL21A1-211ENST00000488912 NUP98P52948 1817 aa13.67□□□□□ -0.22
COL21A1-211ENST00000488912 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
COL21A1-211ENST00000488912 IL6STP40189 918 aaPredicted RBP13.67□□□□□ -0.22
COL21A1-211ENST00000488912 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
COL21A1-211ENST00000488912 IBTKQ9P2D0 1353 aaPredicted RBP13.66□□□□□ -0.22
COL21A1-211ENST00000488912 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
COL21A1-211ENST00000488912 GRM8O00222 908 aa13.66□□□□□ -0.22
COL21A1-211ENST00000488912 GCKRQ14397 625 aa13.66□□□□□ -0.22
COL21A1-211ENST00000488912 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
COL21A1-211ENST00000488912 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
COL21A1-211ENST00000488912 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
COL21A1-211ENST00000488912 UTYO14607 1347 aa13.65□□□□□ -0.22
COL21A1-211ENST00000488912 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
COL21A1-211ENST00000488912 ARXQ96QS3 562 aa13.65□□□□□ -0.22
COL21A1-211ENST00000488912 MAP3K15Q6ZN16 1313 aa13.65□□□□□ -0.22
COL21A1-211ENST00000488912 PNMA6EA0A0J9YXQ4 647 aa13.64□□□□□ -0.23
COL21A1-211ENST00000488912 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
COL21A1-211ENST00000488912 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
COL21A1-211ENST00000488912 TRIM37O94972 964 aa13.64□□□□□ -0.23
COL21A1-211ENST00000488912 RGS3P49796 1198 aa13.64□□□□□ -0.23
COL21A1-211ENST00000488912 CCNL1Q9UK58 526 aaPredicted RBP13.64□□□□□ -0.23
COL21A1-211ENST00000488912 ATP8B2P98198 1209 aa13.63□□□□□ -0.23
COL21A1-211ENST00000488912 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
COL21A1-211ENST00000488912 HMMRO75330 724 aa13.63□□□□□ -0.23
COL21A1-211ENST00000488912 HLFQ16534 295 aa13.63□□□□□ -0.23
COL21A1-211ENST00000488912 NPM2Q86SE8 214 aaKnown RBP13.63□□□□□ -0.23
COL21A1-211ENST00000488912 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
COL21A1-211ENST00000488912 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
COL21A1-211ENST00000488912 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
COL21A1-211ENST00000488912 TCIRG1Q13488 830 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 KAZALD1Q96I82 304 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 SUCLG2Q96I99 432 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 BCORQ6W2J9 1755 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 COL15A1P39059 1388 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 NUCB1Q02818 461 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 GIGYF2Q6Y7W6 1299 aaKnown RBP13.62□□□□□ -0.23
COL21A1-211ENST00000488912 UBE3BQ7Z3V4 1068 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
COL21A1-211ENST00000488912 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
COL21A1-211ENST00000488912 C4BP0C0L5 1744 aa13.62□□□□□ -0.23
COL21A1-211ENST00000488912 A0A087WZG4 1122 aa13.61□□□□□ -0.23
COL21A1-211ENST00000488912 ISCA1Q9BUE6 129 aa13.61□□□□□ -0.23
COL21A1-211ENST00000488912 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
COL21A1-211ENST00000488912 SSH3Q8TE77 659 aa13.61□□□□□ -0.23
COL21A1-211ENST00000488912 BICC1Q9H694 974 aaKnown RBP13.61□□□□□ -0.23
COL21A1-211ENST00000488912 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
COL21A1-211ENST00000488912 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
COL21A1-211ENST00000488912 SRGAP3O43295 1099 aa13.6□□□□□ -0.23
COL21A1-211ENST00000488912 CASP7P55210 303 aa13.6□□□□□ -0.23
COL21A1-211ENST00000488912 ANKRD45Q5TZF3 282 aa13.6□□□□□ -0.23
COL21A1-211ENST00000488912 CHD1LQ86WJ1 897 aa13.6□□□□□ -0.23
COL21A1-211ENST00000488912 LNPKQ9C0E8 428 aa13.6□□□□□ -0.23
COL21A1-211ENST00000488912 PDE4AP27815 886 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 MTX1Q13505 466 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 POLA2Q14181 598 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 LRRC4BQ9NT99 713 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 H7C1W4 665 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 CAMTA2O94983 1202 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 GPTP24298 496 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
COL21A1-211ENST00000488912 RC3H1Q5TC82 1133 aaKnown RBP13.59□□□□□ -0.23
COL21A1-211ENST00000488912 ANO8Q9HCE9 1232 aaPredicted RBP13.59□□□□□ -0.23
COL21A1-211ENST00000488912 EXOC6BQ9Y2D4 811 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 SCN7AQ01118 1682 aa13.59□□□□□ -0.23
COL21A1-211ENST00000488912 TNS1Q9HBL0 1735 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms