RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 PNISRQ8TF01 805 aaKnown RBP34.45■■■■□ 3.11
RNF220-216ENST00000488865 DLG5Q8TDM6 1919 aa34.44■■■■□ 3.1
RNF220-216ENST00000488865 GLTPD2A6NH11 291 aa34.44■■■■□ 3.1
RNF220-216ENST00000488865 C21orf2O43822 256 aa34.44■■■■□ 3.1
RNF220-216ENST00000488865 STYK1Q6J9G0 422 aa34.44■■■■□ 3.1
RNF220-216ENST00000488865 CNKSR1Q969H4 720 aa34.44■■■■□ 3.1
RNF220-216ENST00000488865 MIS18AQ9NYP9 233 aa34.44■■■■□ 3.1
RNF220-216ENST00000488865 CCDC88AQ3V6T2 1871 aa34.44■■■■□ 3.1
RNF220-216ENST00000488865 SRGNP10124 158 aa34.43■■■■□ 3.1
RNF220-216ENST00000488865 NBPF5PQ86XG9 351 aaPredicted RBP34.43■■■■□ 3.1
RNF220-216ENST00000488865 PNNQ9H307 717 aaKnown RBP34.43■■■■□ 3.1
RNF220-216ENST00000488865 NFE2L2Q16236 605 aa34.41■■■■□ 3.1
RNF220-216ENST00000488865 MASTLQ96GX5 879 aa34.41■■■■□ 3.1
RNF220-216ENST00000488865 TIAM2Q8IVF5 1701 aa34.41■■■■□ 3.1
RNF220-216ENST00000488865 FER1L6Q2WGJ9 1857 aa34.4■■■■□ 3.1
RNF220-216ENST00000488865 LAMB4A4D0S4 1761 aa34.4■■■■□ 3.1
RNF220-216ENST00000488865 DNAJC5GQ8N7S2 189 aa34.39■■■■□ 3.1
RNF220-216ENST00000488865 KDM3BQ7LBC6 1761 aa34.39■■■■□ 3.1
RNF220-216ENST00000488865 LTBP3Q9NS15 1303 aa34.38■■■■□ 3.09
RNF220-216ENST00000488865 VEGFAP15692 232 aaPredicted RBP34.38■■■■□ 3.09
RNF220-216ENST00000488865 ZNF219Q9P2Y4 722 aaPredicted RBP34.38■■■■□ 3.09
RNF220-216ENST00000488865 SOGA3Q5TF21 947 aa34.37■■■■□ 3.09
RNF220-216ENST00000488865 PRPF40BQ6NWY9 871 aaKnown RBP34.37■■■■□ 3.09
RNF220-216ENST00000488865 TPTE2Q6XPS3 522 aa34.37■■■■□ 3.09
RNF220-216ENST00000488865 NIP7Q9Y221 180 aaKnown RBP eCLIP34.37■■■■□ 3.09
RNF220-216ENST00000488865 SMC1BQ8NDV3 1235 aa34.36■■■■□ 3.09
RNF220-216ENST00000488865 SLX4Q8IY92 1834 aa34.36■■■■□ 3.09
RNF220-216ENST00000488865 ARFGEF2Q9Y6D5 1785 aa34.36■■■■□ 3.09
RNF220-216ENST00000488865 MAPK8IP3Q9UPT6 1336 aa34.35■■■■□ 3.09
RNF220-216ENST00000488865 TAOK3Q9H2K8 898 aa34.35■■■■□ 3.09
RNF220-216ENST00000488865 WDR90Q96KV7 1748 aa34.35■■■■□ 3.09
RNF220-216ENST00000488865 DICER1Q9UPY3 1922 aaKnown RBP34.34■■■■□ 3.09
RNF220-216ENST00000488865 KLRG2A4D1S0 409 aaPredicted RBP34.34■■■■□ 3.09
RNF220-216ENST00000488865 EIF4A1P60842 406 aaKnown RBP34.34■■■■□ 3.09
RNF220-216ENST00000488865 ERFEQ4G0M1 354 aa34.34■■■■□ 3.09
RNF220-216ENST00000488865 DPY19L2Q6NUT2 758 aa34.34■■■■□ 3.09
RNF220-216ENST00000488865 NPR1P16066 1061 aa34.32■■■■□ 3.08
RNF220-216ENST00000488865 HLFQ16534 295 aa34.32■■■■□ 3.08
RNF220-216ENST00000488865 CACNA1SQ13698 1873 aa34.31■■■■□ 3.08
RNF220-216ENST00000488865 RALBP1Q15311 655 aa34.31■■■■□ 3.08
RNF220-216ENST00000488865 THUMPD2Q9BTF0 503 aaKnown RBP34.31■■■■□ 3.08
RNF220-216ENST00000488865 ERVV-1B6SEH8 477 aa34.3■■■■□ 3.08
RNF220-216ENST00000488865 C7orf43Q8WVR3 580 aa34.29■■■■□ 3.08
RNF220-216ENST00000488865 MAP3K15Q6ZN16 1313 aa34.26■■■■□ 3.07
RNF220-216ENST00000488865 FAM177BA6PVY3 158 aa34.25■■■■□ 3.07
RNF220-216ENST00000488865 POTECB2RU33 542 aa34.25■■■■□ 3.07
RNF220-216ENST00000488865 CCDC93Q567U6 631 aa34.25■■■■□ 3.07
RNF220-216ENST00000488865 IFFO2Q5TF58 517 aa34.25■■■■□ 3.07
RNF220-216ENST00000488865 NGEFQ8N5V2 710 aa34.25■■■■□ 3.07
RNF220-216ENST00000488865 RRP7AQ9Y3A4 280 aaKnown RBP34.25■■■■□ 3.07
RNF220-216ENST00000488865 GTF2E1P29083 439 aaPredicted RBP34.24■■■■□ 3.07
RNF220-216ENST00000488865 KIF6Q6ZMV9 814 aa34.24■■■■□ 3.07
RNF220-216ENST00000488865 NYXQ9GZU5 481 aa34.24■■■■□ 3.07
RNF220-216ENST00000488865 HTRA3P83110 453 aa34.23■■■■□ 3.07
RNF220-216ENST00000488865 KLRG1Q96E93 195 aa34.23■■■■□ 3.07
RNF220-216ENST00000488865 ERBB4Q15303 1308 aa34.23■■■■□ 3.07
RNF220-216ENST00000488865 TTLL7Q6ZT98 887 aa34.22■■■■□ 3.07
RNF220-216ENST00000488865 NUP98P52948 1817 aa34.22■■■■□ 3.07
RNF220-216ENST00000488865 MYL6BP14649 208 aa34.21■■■■□ 3.07
RNF220-216ENST00000488865 ALDH1B1P30837 517 aa34.21■■■■□ 3.07
RNF220-216ENST00000488865 RIPK4P57078 832 aa34.21■■■■□ 3.07
RNF220-216ENST00000488865 TSPYL4Q9UJ04 414 aa34.21■■■■□ 3.07
RNF220-216ENST00000488865 BABAM1Q9NWV8 329 aa34.2■■■■□ 3.07
RNF220-216ENST00000488865 FKBP4Q02790 459 aaKnown RBP eCLIP34.18■■■■□ 3.06
RNF220-216ENST00000488865 RTKN2Q8IZC4 609 aa34.18■■■■□ 3.06
RNF220-216ENST00000488865 LMOD3Q0VAK6 560 aa34.17■■■■□ 3.06
RNF220-216ENST00000488865 CRY2Q49AN0 593 aa34.17■■■■□ 3.06
RNF220-216ENST00000488865 IBTKQ9P2D0 1353 aaPredicted RBP34.17■■■■□ 3.06
RNF220-216ENST00000488865 DDNO94850 711 aaPredicted RBP34.16■■■■□ 3.06
RNF220-216ENST00000488865 TMPOP42166 694 aaKnown RBP34.16■■■■□ 3.06
RNF220-216ENST00000488865 JMYQ8N9B5 988 aa34.16■■■■□ 3.06
RNF220-216ENST00000488865 ABCC12Q96J65 1359 aa34.15■■■■□ 3.06
RNF220-216ENST00000488865 NUTM1Q86Y26 1132 aa34.15■■■■□ 3.06
RNF220-216ENST00000488865 ZBTB3Q9H5J0 574 aa34.15■■■■□ 3.06
RNF220-216ENST00000488865 MYBBP1AQ9BQG0 1328 aaKnown RBP34.14■■■■□ 3.06
RNF220-216ENST00000488865 RIC1Q4ADV7 1423 aa34.13■■■■□ 3.05
RNF220-216ENST00000488865 UBN2Q6ZU65 1347 aa34.13■■■■□ 3.05
RNF220-216ENST00000488865 DDX10Q13206 875 aaKnown RBP34.13■■■■□ 3.05
RNF220-216ENST00000488865 GIGYF2Q6Y7W6 1299 aaKnown RBP34.13■■■■□ 3.05
RNF220-216ENST00000488865 ZNF34Q8IZ26 560 aa34.13■■■■□ 3.05
RNF220-216ENST00000488865 GPTP24298 496 aa34.12■■■■□ 3.05
RNF220-216ENST00000488865 OLFM4Q6UX06 510 aa34.12■■■■□ 3.05
RNF220-216ENST00000488865 SUSD4Q5VX71 490 aa34.11■■■■□ 3.05
RNF220-216ENST00000488865 LRP10Q7Z4F1 713 aa34.11■■■■□ 3.05
RNF220-216ENST00000488865 ZNF277Q9NRM2 450 aaPredicted RBP34.11■■■■□ 3.05
RNF220-216ENST00000488865 PDIA6Q15084 440 aa34.1■■■■□ 3.05
RNF220-216ENST00000488865 HOXA10P31260 410 aaPredicted RBP34.09■■■■□ 3.05
RNF220-216ENST00000488865 L3MBTL3Q96JM7 780 aaPredicted RBP34.09■■■■□ 3.05
RNF220-216ENST00000488865 IQCA1LA6NCM1 817 aa34.08■■■■□ 3.05
RNF220-216ENST00000488865 EIF2S2P20042 333 aaKnown RBP34.08■■■■□ 3.05
RNF220-216ENST00000488865 CC2D2BQ6DHV5 1058 aa34.08■■■■□ 3.05
RNF220-216ENST00000488865 RPGRQ92834 1020 aaKnown RBP34.08■■■■□ 3.05
RNF220-216ENST00000488865 PARP10Q53GL7 1025 aa34.07■■■■□ 3.04
RNF220-216ENST00000488865 CHADLQ6NUI6 762 aa34.07■■■■□ 3.04
RNF220-216ENST00000488865 PPP1R42Q7Z4L9 355 aa34.07■■■■□ 3.04
RNF220-216ENST00000488865 SYNE4Q8N205 404 aa34.07■■■■□ 3.04
RNF220-216ENST00000488865 SNED1Q8TER0 1413 aa34.06■■■■□ 3.04
RNF220-216ENST00000488865 NTSR2O95665 410 aa34.06■■■■□ 3.04
RNF220-216ENST00000488865 IARSP41252 1262 aaKnown RBP34.06■■■■□ 3.04
RNF220-216ENST00000488865 PSMD1Q99460 953 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms