RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 L1TD1Q5T7N2 865 aaKnown RBP16.54■□□□□ 0.24
CHD1L-208ENST00000488864 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
CHD1L-208ENST00000488864 PI4KAP1Q8N8J0 262 aa16.54■□□□□ 0.24
CHD1L-208ENST00000488864 SPRYD3Q8NCJ5 442 aa16.54■□□□□ 0.24
CHD1L-208ENST00000488864 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
CHD1L-208ENST00000488864 SBF2Q86WG5 1849 aa16.54■□□□□ 0.24
CHD1L-208ENST00000488864 BTAF1O14981 1849 aa16.54■□□□□ 0.24
CHD1L-208ENST00000488864 CYP19A1P11511 503 aaPredicted RBP16.54■□□□□ 0.24
CHD1L-208ENST00000488864 LRP10Q7Z4F1 713 aa16.54■□□□□ 0.24
CHD1L-208ENST00000488864 ABCC4O15439 1325 aa16.53■□□□□ 0.24
CHD1L-208ENST00000488864 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
CHD1L-208ENST00000488864 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
CHD1L-208ENST00000488864 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
CHD1L-208ENST00000488864 CACNA1FO60840 1977 aa16.52■□□□□ 0.23
CHD1L-208ENST00000488864 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
CHD1L-208ENST00000488864 XRCC6P12956 609 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHD1L-208ENST00000488864 UPF2Q9HAU5 1272 aaKnown RBP16.51■□□□□ 0.23
CHD1L-208ENST00000488864 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
CHD1L-208ENST00000488864 TTLL7Q6ZT98 887 aa16.5■□□□□ 0.23
CHD1L-208ENST00000488864 CCNL1Q9UK58 526 aaPredicted RBP16.5■□□□□ 0.23
CHD1L-208ENST00000488864 ADCY9O60503 1353 aa16.5■□□□□ 0.23
CHD1L-208ENST00000488864 CRKLP46109 303 aaKnown RBP16.5■□□□□ 0.23
CHD1L-208ENST00000488864 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
CHD1L-208ENST00000488864 RIC3Q7Z5B4 369 aa16.49■□□□□ 0.23
CHD1L-208ENST00000488864 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
CHD1L-208ENST00000488864 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
CHD1L-208ENST00000488864 DDX19BQ9UMR2 479 aa16.49■□□□□ 0.23
CHD1L-208ENST00000488864 TJP1Q07157 1748 aa16.49■□□□□ 0.23
CHD1L-208ENST00000488864 ERBB4Q15303 1308 aa16.48■□□□□ 0.23
CHD1L-208ENST00000488864 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
CHD1L-208ENST00000488864 SMIM5Q71RC9 77 aa16.48■□□□□ 0.23
CHD1L-208ENST00000488864 PANK2Q9BZ23 570 aa16.48■□□□□ 0.23
CHD1L-208ENST00000488864 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
CHD1L-208ENST00000488864 INTS3Q68E01 1043 aaKnown RBP16.48■□□□□ 0.23
CHD1L-208ENST00000488864 INTS5Q6P9B9 1019 aaKnown RBP16.48■□□□□ 0.23
CHD1L-208ENST00000488864 ANKRD13DQ6ZTN6 518 aa16.48■□□□□ 0.23
CHD1L-208ENST00000488864 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
CHD1L-208ENST00000488864 FSD2A1L4K1 749 aa16.47■□□□□ 0.23
CHD1L-208ENST00000488864 MCM4P33991 863 aa16.47■□□□□ 0.23
CHD1L-208ENST00000488864 CCDC87Q9NVE4 849 aa16.47■□□□□ 0.23
CHD1L-208ENST00000488864 APBA3O96018 575 aa16.47■□□□□ 0.23
CHD1L-208ENST00000488864 C1orf115Q9H7X2 142 aa16.47■□□□□ 0.23
CHD1L-208ENST00000488864 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
CHD1L-208ENST00000488864 GOLGA6L3A6NEY3 463 aa16.46■□□□□ 0.23
CHD1L-208ENST00000488864 ZBTB7BO15156 539 aaPredicted RBP16.46■□□□□ 0.23
CHD1L-208ENST00000488864 CWF19L2Q2TBE0 894 aaKnown RBP16.46■□□□□ 0.23
CHD1L-208ENST00000488864 MEIS3Q99687 375 aa16.46■□□□□ 0.23
CHD1L-208ENST00000488864 RWDD1Q9H446 243 aaPredicted RBP16.46■□□□□ 0.23
CHD1L-208ENST00000488864 MYH14Q7Z406 1995 aaKnown RBP16.45■□□□□ 0.22
CHD1L-208ENST00000488864 CCT4P50991 539 aaKnown RBP16.45■□□□□ 0.22
CHD1L-208ENST00000488864 TBC1D2BQ9UPU7 963 aa16.45■□□□□ 0.22
CHD1L-208ENST00000488864 BEND3Q5T5X7 828 aa16.45■□□□□ 0.22
CHD1L-208ENST00000488864 SRCIN1Q9C0H9 1055 aa16.45■□□□□ 0.22
CHD1L-208ENST00000488864 AAMPQ13685 434 aa16.44■□□□□ 0.22
CHD1L-208ENST00000488864 MYD88Q99836 296 aa16.44■□□□□ 0.22
CHD1L-208ENST00000488864 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
CHD1L-208ENST00000488864 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
CHD1L-208ENST00000488864 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
CHD1L-208ENST00000488864 IL6STP40189 918 aaPredicted RBP16.43■□□□□ 0.22
CHD1L-208ENST00000488864 PROM2Q8N271 834 aa16.43■□□□□ 0.22
CHD1L-208ENST00000488864 IGKV5-2P06315 115 aa16.42■□□□□ 0.22
CHD1L-208ENST00000488864 EIF5P55010 431 aaKnown RBP16.42■□□□□ 0.22
CHD1L-208ENST00000488864 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
CHD1L-208ENST00000488864 TXNRD1Q16881 649 aa16.42■□□□□ 0.22
CHD1L-208ENST00000488864 METTL22Q9BUU2 404 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-208ENST00000488864 C22orf23Q9BZE7 217 aa16.42■□□□□ 0.22
CHD1L-208ENST00000488864 GNPATO15228 680 aa16.41■□□□□ 0.22
CHD1L-208ENST00000488864 TRAK2O60296 914 aa16.41■□□□□ 0.22
CHD1L-208ENST00000488864 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
CHD1L-208ENST00000488864 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
CHD1L-208ENST00000488864 DZIP3Q86Y13 1208 aaKnown RBP16.41■□□□□ 0.22
CHD1L-208ENST00000488864 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
CHD1L-208ENST00000488864 HLFQ16534 295 aa16.41■□□□□ 0.22
CHD1L-208ENST00000488864 USP44Q9H0E7 712 aa16.41■□□□□ 0.22
CHD1L-208ENST00000488864 LY75O60449 1722 aa16.41■□□□□ 0.22
CHD1L-208ENST00000488864 CHMP5Q9NZZ3 219 aa16.4■□□□□ 0.22
CHD1L-208ENST00000488864 NBPF7P0C2Y1 421 aaPredicted RBP16.4■□□□□ 0.22
CHD1L-208ENST00000488864 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
CHD1L-208ENST00000488864 JARID2Q92833 1246 aaPredicted RBP16.4■□□□□ 0.22
CHD1L-208ENST00000488864 COL5A3P25940 1745 aaPredicted RBP16.4■□□□□ 0.22
CHD1L-208ENST00000488864 PHF14O94880 888 aa16.39■□□□□ 0.21
CHD1L-208ENST00000488864 PXDNLA1KZ92 1463 aa16.39■□□□□ 0.21
CHD1L-208ENST00000488864 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
CHD1L-208ENST00000488864 CNTNAP4Q9C0A0 1308 aa16.39■□□□□ 0.21
CHD1L-208ENST00000488864 NEURL1BA8MQ27 555 aa16.39■□□□□ 0.21
CHD1L-208ENST00000488864 PLSCR1O15162 318 aa16.38■□□□□ 0.21
CHD1L-208ENST00000488864 C9orf78Q9NZ63 289 aaPredicted RBP16.38■□□□□ 0.21
CHD1L-208ENST00000488864 COL15A1P39059 1388 aa16.38■□□□□ 0.21
CHD1L-208ENST00000488864 GPTP24298 496 aa16.38■□□□□ 0.21
CHD1L-208ENST00000488864 EN1Q05925 392 aaPredicted RBP16.38■□□□□ 0.21
CHD1L-208ENST00000488864 SLC27A3Q5K4L6 730 aa16.38■□□□□ 0.21
CHD1L-208ENST00000488864 AK7Q96M32 723 aa16.38■□□□□ 0.21
CHD1L-208ENST00000488864 NAP1L5Q96NT1 182 aaPredicted RBP16.38■□□□□ 0.21
CHD1L-208ENST00000488864 ATP10DQ9P241 1426 aa16.38■□□□□ 0.21
CHD1L-208ENST00000488864 CLCN1P35523 988 aa16.37■□□□□ 0.21
CHD1L-208ENST00000488864 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
CHD1L-208ENST00000488864 ZNF831Q5JPB2 1677 aa16.37■□□□□ 0.21
CHD1L-208ENST00000488864 ARFGEF2Q9Y6D5 1785 aa16.37■□□□□ 0.21
CHD1L-208ENST00000488864 UBTFL1P0CB47 393 aaPredicted RBP16.37■□□□□ 0.21
CHD1L-208ENST00000488864 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms