RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 GIGYF1O75420 1035 aaPredicted RBP15.35■□□□□ 0.05
CLIC4-202ENST00000488683 HSPA4P34932 840 aa15.35■□□□□ 0.05
CLIC4-202ENST00000488683 SUCLG2Q96I99 432 aa15.35■□□□□ 0.05
CLIC4-202ENST00000488683 TAF6LQ9Y6J9 622 aa15.35■□□□□ 0.05
CLIC4-202ENST00000488683 SGSM2O43147 1006 aa15.35■□□□□ 0.05
CLIC4-202ENST00000488683 BRD1O95696 1058 aa15.35■□□□□ 0.05
CLIC4-202ENST00000488683 IL17RAQ96F46 866 aa15.35■□□□□ 0.05
CLIC4-202ENST00000488683 FAM227BQ96M60 508 aa15.35■□□□□ 0.05
CLIC4-202ENST00000488683 LSG1Q9H089 658 aaKnown RBP15.35■□□□□ 0.05
CLIC4-202ENST00000488683 NCAPD2Q15021 1401 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 SLIT3O75094 1523 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 CASTP20810 708 aaKnown RBP15.34■□□□□ 0.05
CLIC4-202ENST00000488683 ZNF445P59923 1031 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
CLIC4-202ENST00000488683 AACSQ86V21 672 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 KAZALD1Q96I82 304 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 BICC1Q9H694 974 aaKnown RBP15.34■□□□□ 0.05
CLIC4-202ENST00000488683 DBF4Q9UBU7 674 aaPredicted RBP15.34■□□□□ 0.05
CLIC4-202ENST00000488683 CRYBG1Q9Y4K1 1723 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 MCM2P49736 904 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 RUFY3Q7L099 469 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 CNPY2Q9Y2B0 182 aa15.34■□□□□ 0.05
CLIC4-202ENST00000488683 CHRNA2Q15822 529 aa15.33■□□□□ 0.05
CLIC4-202ENST00000488683 NECAB1Q8N987 351 aa15.33■□□□□ 0.05
CLIC4-202ENST00000488683 SIPA1L3O60292 1781 aaPredicted RBP15.33■□□□□ 0.05
CLIC4-202ENST00000488683 RAD50Q92878 1312 aa15.33■□□□□ 0.04
CLIC4-202ENST00000488683 HEG1Q9ULI3 1381 aa15.33■□□□□ 0.04
CLIC4-202ENST00000488683 AMOTQ4VCS5 1084 aa15.33■□□□□ 0.04
CLIC4-202ENST00000488683 USP48Q86UV5 1035 aa15.33■□□□□ 0.04
CLIC4-202ENST00000488683 CCDC83Q8IWF9 413 aa15.32■□□□□ 0.04
CLIC4-202ENST00000488683 BOLA2Q9H3K6 86 aa15.32■□□□□ 0.04
CLIC4-202ENST00000488683 EPHA10Q5JZY3 1008 aa15.32■□□□□ 0.04
CLIC4-202ENST00000488683 CNTROBQ8N137 903 aa15.32■□□□□ 0.04
CLIC4-202ENST00000488683 NFATC2IPQ8NCF5 419 aa15.32■□□□□ 0.04
CLIC4-202ENST00000488683 NLRP2Q9NX02 1062 aa15.32■□□□□ 0.04
CLIC4-202ENST00000488683 TRPM3Q9HCF6 1732 aaPredicted RBP15.32■□□□□ 0.04
CLIC4-202ENST00000488683 SASH1O94885 1247 aa15.31■□□□□ 0.04
CLIC4-202ENST00000488683 MTX1Q13505 466 aa15.31■□□□□ 0.04
CLIC4-202ENST00000488683 EAF2Q96CJ1 260 aaPredicted RBP15.31■□□□□ 0.04
CLIC4-202ENST00000488683 INTS4Q96HW7 963 aaKnown RBP15.31■□□□□ 0.04
CLIC4-202ENST00000488683 JAKMIP1Q96N16 626 aaKnown RBP15.31■□□□□ 0.04
CLIC4-202ENST00000488683 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
CLIC4-202ENST00000488683 CAMTA1Q9Y6Y1 1673 aa15.31■□□□□ 0.04
CLIC4-202ENST00000488683 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
CLIC4-202ENST00000488683 IFIT2P09913 472 aaKnown RBP15.3■□□□□ 0.04
CLIC4-202ENST00000488683 SLFNL1Q499Z3 407 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 CHMP3Q9Y3E7 222 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 FAM173BQ6P4H8 233 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 KRT28Q7Z3Y7 464 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 CLASRPQ8N2M8 674 aaKnown RBP15.3■□□□□ 0.04
CLIC4-202ENST00000488683 USP42Q9H9J4 1324 aaKnown RBP15.3■□□□□ 0.04
CLIC4-202ENST00000488683 NPHP4O75161 1426 aaPredicted RBP15.3■□□□□ 0.04
CLIC4-202ENST00000488683 ATP5J2-PTCD1G3V325 749 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 FIBPO43427 364 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 PTCD1O75127 700 aaKnown RBP15.3■□□□□ 0.04
CLIC4-202ENST00000488683 CCDC173Q0VFZ6 552 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 KIAA1211Q6ZU35 1233 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 PPP1R9BQ96SB3 815 aa15.3■□□□□ 0.04
CLIC4-202ENST00000488683 IGKV5-2P06315 115 aa15.29■□□□□ 0.04
CLIC4-202ENST00000488683 RIC3Q7Z5B4 369 aa15.29■□□□□ 0.04
CLIC4-202ENST00000488683 PPFIA3O75145 1194 aa15.29■□□□□ 0.04
CLIC4-202ENST00000488683 PDIA6Q15084 440 aa15.29■□□□□ 0.04
CLIC4-202ENST00000488683 TTC14Q96N46 770 aa15.29■□□□□ 0.04
CLIC4-202ENST00000488683 MYD88Q99836 296 aa15.29■□□□□ 0.04
CLIC4-202ENST00000488683 USP16Q9Y5T5 823 aa15.29■□□□□ 0.04
CLIC4-202ENST00000488683 C5P01031 1676 aa15.28■□□□□ 0.04
CLIC4-202ENST00000488683 ALDH1L1O75891 902 aa15.28■□□□□ 0.04
CLIC4-202ENST00000488683 ANP32BQ92688 251 aaKnown RBP15.28■□□□□ 0.04
CLIC4-202ENST00000488683 OVOS2A0A0G2JMS6 1433 aa15.28■□□□□ 0.04
CLIC4-202ENST00000488683 NMIQ13287 307 aaPredicted RBP15.28■□□□□ 0.04
CLIC4-202ENST00000488683 HSP90AB4PQ58FF6 505 aa15.28■□□□□ 0.04
CLIC4-202ENST00000488683 LRSAM1Q6UWE0 723 aa15.28■□□□□ 0.04
CLIC4-202ENST00000488683 FERMT3Q86UX7 667 aa15.28■□□□□ 0.04
CLIC4-202ENST00000488683 XAGE3Q8WTP9 111 aa15.28■□□□□ 0.04
CLIC4-202ENST00000488683 TTC41PQ6P2S7 1318 aa15.28■□□□□ 0.04
CLIC4-202ENST00000488683 A0A0D9SFI3 127 aa15.27■□□□□ 0.04
CLIC4-202ENST00000488683 EPB41L2O43491 1005 aaKnown RBP15.27■□□□□ 0.04
CLIC4-202ENST00000488683 GLRX3O76003 335 aaKnown RBP15.27■□□□□ 0.04
CLIC4-202ENST00000488683 SYT1P21579 422 aa15.27■□□□□ 0.04
CLIC4-202ENST00000488683 ERBB3P21860 1342 aa15.27■□□□□ 0.04
CLIC4-202ENST00000488683 KCNJ4P48050 445 aa15.27■□□□□ 0.04
CLIC4-202ENST00000488683 STK3Q13188 491 aa15.27■□□□□ 0.04
CLIC4-202ENST00000488683 COPS6Q7L5N1 327 aa15.27■□□□□ 0.04
CLIC4-202ENST00000488683 ADAMTS7Q9UKP4 1686 aa15.27■□□□□ 0.04
CLIC4-202ENST00000488683 GRM8O00222 908 aa15.27■□□□□ 0.03
CLIC4-202ENST00000488683 ST3GAL1Q11201 340 aa15.27■□□□□ 0.03
CLIC4-202ENST00000488683 PROSER2Q86WR7 435 aaPredicted RBP15.27■□□□□ 0.03
CLIC4-202ENST00000488683 ZNF830Q96NB3 372 aaPredicted RBP15.27■□□□□ 0.03
CLIC4-202ENST00000488683 ECHDC1Q9NTX5 307 aa15.27■□□□□ 0.03
CLIC4-202ENST00000488683 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.03
CLIC4-202ENST00000488683 CHMP4AQ9BY43 222 aa15.26■□□□□ 0.03
CLIC4-202ENST00000488683 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
CLIC4-202ENST00000488683 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
CLIC4-202ENST00000488683 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
CLIC4-202ENST00000488683 VPS37CA5D8V6 355 aaPredicted RBP15.25■□□□□ 0.03
CLIC4-202ENST00000488683 GJB2P29033 226 aa15.25■□□□□ 0.03
CLIC4-202ENST00000488683 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
CLIC4-202ENST00000488683 ZNF589Q86UQ0 364 aaPredicted RBP15.25■□□□□ 0.03
CLIC4-202ENST00000488683 HYPKQ9NX55 129 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms