RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 ZNF790Q6PG37 636 aa15.35■□□□□ 0.05
SNU13-208ENST00000488571 BICDL1Q6ZP65 573 aa15.35■□□□□ 0.05
SNU13-208ENST00000488571 TTC5Q8N0Z6 440 aa15.35■□□□□ 0.05
SNU13-208ENST00000488571 SMC1BQ8NDV3 1235 aa15.35■□□□□ 0.05
SNU13-208ENST00000488571 FER1L6Q2WGJ9 1857 aa15.34■□□□□ 0.05
SNU13-208ENST00000488571 H0YIN7 160 aa15.34■□□□□ 0.05
SNU13-208ENST00000488571 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
SNU13-208ENST00000488571 PCNTO95613 3336 aa15.34■□□□□ 0.05
SNU13-208ENST00000488571 DICER1Q9UPY3 1922 aaKnown RBP15.33■□□□□ 0.05
SNU13-208ENST00000488571 A0A087WZG4 1122 aa15.33■□□□□ 0.04
SNU13-208ENST00000488571 GNAT3A8MTJ3 354 aa15.33■□□□□ 0.04
SNU13-208ENST00000488571 GABBR2O75899 941 aa15.33■□□□□ 0.04
SNU13-208ENST00000488571 BCORQ6W2J9 1755 aa15.33■□□□□ 0.04
SNU13-208ENST00000488571 NPC1L1Q9UHC9 1359 aa15.33■□□□□ 0.04
SNU13-208ENST00000488571 POTECB2RU33 542 aa15.32■□□□□ 0.04
SNU13-208ENST00000488571 VEGFAP15692 232 aaPredicted RBP15.32■□□□□ 0.04
SNU13-208ENST00000488571 TEFQ10587 303 aa15.32■□□□□ 0.04
SNU13-208ENST00000488571 PRR5LQ6MZQ0 368 aa15.32■□□□□ 0.04
SNU13-208ENST00000488571 CCDC24Q8N4L8 307 aa15.32■□□□□ 0.04
SNU13-208ENST00000488571 TBC1D2BQ9UPU7 963 aa15.32■□□□□ 0.04
SNU13-208ENST00000488571 CEMIPQ8WUJ3 1361 aa15.32■□□□□ 0.04
SNU13-208ENST00000488571 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
SNU13-208ENST00000488571 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
SNU13-208ENST00000488571 COL13A1Q5TAT6 717 aaPredicted RBP15.31■□□□□ 0.04
SNU13-208ENST00000488571 BRIP1Q9BX63 1249 aa15.31■□□□□ 0.04
SNU13-208ENST00000488571 TEX13AQ9BXU3 409 aaPredicted RBP15.31■□□□□ 0.04
SNU13-208ENST00000488571 A1BGP04217 495 aa15.3■□□□□ 0.04
SNU13-208ENST00000488571 CACNA1SQ13698 1873 aa15.3■□□□□ 0.04
SNU13-208ENST00000488571 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
SNU13-208ENST00000488571 ZNF330Q9Y3S2 320 aaPredicted RBP15.3■□□□□ 0.04
SNU13-208ENST00000488571 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 ARFGEF2Q9Y6D5 1785 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 KCNQ3O43525 872 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 C21orf2O43822 256 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 PDE6BP35913 854 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 ZNF622Q969S3 477 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNU13-208ENST00000488571 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 FMNL2Q96PY5 1086 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
SNU13-208ENST00000488571 CNGB1Q14028 1251 aaPredicted RBP15.28■□□□□ 0.04
SNU13-208ENST00000488571 LTBP3Q9NS15 1303 aa15.27■□□□□ 0.04
SNU13-208ENST00000488571 ERFEQ4G0M1 354 aa15.27■□□□□ 0.04
SNU13-208ENST00000488571 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
SNU13-208ENST00000488571 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
SNU13-208ENST00000488571 CNBD1Q8NA66 436 aa15.26■□□□□ 0.03
SNU13-208ENST00000488571 SETDB2Q96T68 719 aa15.26■□□□□ 0.03
SNU13-208ENST00000488571 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
SNU13-208ENST00000488571 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
SNU13-208ENST00000488571 PRAMEF22A3QJZ6 481 aa15.25■□□□□ 0.03
SNU13-208ENST00000488571 BTBD11A6QL63 1104 aa15.25■□□□□ 0.03
SNU13-208ENST00000488571 SRGNP10124 158 aa15.25■□□□□ 0.03
SNU13-208ENST00000488571 PIP4K2AP48426 406 aaPredicted RBP15.25■□□□□ 0.03
SNU13-208ENST00000488571 PRPF40BQ6NWY9 871 aaKnown RBP15.25■□□□□ 0.03
SNU13-208ENST00000488571 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
SNU13-208ENST00000488571 STYK1Q6J9G0 422 aa15.24■□□□□ 0.03
SNU13-208ENST00000488571 TAOK3Q9H2K8 898 aa15.24■□□□□ 0.03
SNU13-208ENST00000488571 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
SNU13-208ENST00000488571 POTEJP0CG39 1038 aa15.23■□□□□ 0.03
SNU13-208ENST00000488571 ST5P78524 1137 aa15.23■□□□□ 0.03
SNU13-208ENST00000488571 CNKSR1Q969H4 720 aa15.23■□□□□ 0.03
SNU13-208ENST00000488571 DDNO94850 711 aaPredicted RBP15.22■□□□□ 0.03
SNU13-208ENST00000488571 HSPA1AP0DMV8 641 aaKnown RBP15.22■□□□□ 0.03
SNU13-208ENST00000488571 HSPA1BP0DMV9 641 aaKnown RBP15.22■□□□□ 0.03
SNU13-208ENST00000488571 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
SNU13-208ENST00000488571 C7orf43Q8WVR3 580 aa15.22■□□□□ 0.03
SNU13-208ENST00000488571 MASTLQ96GX5 879 aa15.22■□□□□ 0.03
SNU13-208ENST00000488571 NPHP1O15259 732 aa15.21■□□□□ 0.03
SNU13-208ENST00000488571 CLEC4GQ6UXB4 293 aa15.21■□□□□ 0.03
SNU13-208ENST00000488571 TNS4Q8IZW8 715 aa15.21■□□□□ 0.03
SNU13-208ENST00000488571 KLRG2A4D1S0 409 aaPredicted RBP15.2■□□□□ 0.02
SNU13-208ENST00000488571 NBPF26B4DH59 902 aa15.2■□□□□ 0.02
SNU13-208ENST00000488571 SNRPA1P09661 255 aaKnown RBP15.2■□□□□ 0.02
SNU13-208ENST00000488571 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
SNU13-208ENST00000488571 NBPF10Q6P3W6 841 aaKnown RBP15.2■□□□□ 0.02
SNU13-208ENST00000488571 MCM10Q7L590 875 aa15.2■□□□□ 0.02
SNU13-208ENST00000488571 NBPF5PQ86XG9 351 aaPredicted RBP15.2■□□□□ 0.02
SNU13-208ENST00000488571 NBPF15Q8N660 670 aa15.2■□□□□ 0.02
SNU13-208ENST00000488571 CFAP53Q96M91 514 aa15.2■□□□□ 0.02
SNU13-208ENST00000488571 SCN4AP35499 1836 aa15.2■□□□□ 0.02
SNU13-208ENST00000488571 LAMB4A4D0S4 1761 aa15.19■□□□□ 0.02
SNU13-208ENST00000488571 NPR1P16066 1061 aa15.18■□□□□ 0.02
SNU13-208ENST00000488571 DCTN1Q14203 1278 aa15.18■□□□□ 0.02
SNU13-208ENST00000488571 L3MBTL3Q96JM7 780 aaPredicted RBP15.18■□□□□ 0.02
SNU13-208ENST00000488571 RGL2O15211 777 aa15.17■□□□□ 0.02
SNU13-208ENST00000488571 U2AF1L5P0DN76 240 aaPredicted RBP15.17■□□□□ 0.02
SNU13-208ENST00000488571 PPP2R1AP30153 589 aa15.17■□□□□ 0.02
SNU13-208ENST00000488571 U2AF1Q01081 240 aaKnown RBP eCLIP15.17■□□□□ 0.02
SNU13-208ENST00000488571 CCDC93Q567U6 631 aa15.17■□□□□ 0.02
SNU13-208ENST00000488571 OLFM4Q6UX06 510 aa15.17■□□□□ 0.02
SNU13-208ENST00000488571 NUDCQ9Y266 331 aa15.17■□□□□ 0.02
SNU13-208ENST00000488571 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
SNU13-208ENST00000488571 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
SNU13-208ENST00000488571 ADAMTSL1Q8N6G6 1762 aa15.16■□□□□ 0.02
SNU13-208ENST00000488571 RTF1Q92541 710 aaKnown RBP15.16■□□□□ 0.02
SNU13-208ENST00000488571 MKRN1Q9UHC7 482 aaKnown RBP15.16■□□□□ 0.02
SNU13-208ENST00000488571 NIP7Q9Y221 180 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNU13-208ENST00000488571 ZNF541Q9H0D2 1346 aa15.16■□□□□ 0.02
SNU13-208ENST00000488571 HTATSF1O43719 755 aaKnown RBP15.15■□□□□ 0.02
SNU13-208ENST00000488571 FKBP4Q02790 459 aaKnown RBP eCLIP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms