RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 A1BGP04217 495 aa16.47■□□□□ 0.23
TTC3-221ENST00000488522 SOGA3Q5TF21 947 aa16.47■□□□□ 0.23
TTC3-221ENST00000488522 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
TTC3-221ENST00000488522 CNKSR1Q969H4 720 aa16.47■□□□□ 0.23
TTC3-221ENST00000488522 ZNF622Q969S3 477 aaKnown RBP eCLIP16.47■□□□□ 0.23
TTC3-221ENST00000488522 PHACTR3Q96KR7 559 aa16.47■□□□□ 0.23
TTC3-221ENST00000488522 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
TTC3-221ENST00000488522 ERFEQ4G0M1 354 aa16.46■□□□□ 0.23
TTC3-221ENST00000488522 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
TTC3-221ENST00000488522 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.23
TTC3-221ENST00000488522 SCN4AP35499 1836 aa16.45■□□□□ 0.22
TTC3-221ENST00000488522 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
TTC3-221ENST00000488522 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
TTC3-221ENST00000488522 KCNQ3O43525 872 aa16.45■□□□□ 0.22
TTC3-221ENST00000488522 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
TTC3-221ENST00000488522 ST5P78524 1137 aa16.45■□□□□ 0.22
TTC3-221ENST00000488522 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
TTC3-221ENST00000488522 C7orf43Q8WVR3 580 aa16.45■□□□□ 0.22
TTC3-221ENST00000488522 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
TTC3-221ENST00000488522 LAMB4A4D0S4 1761 aa16.44■□□□□ 0.22
TTC3-221ENST00000488522 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
TTC3-221ENST00000488522 NPM2Q86SE8 214 aaKnown RBP16.43■□□□□ 0.22
TTC3-221ENST00000488522 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
TTC3-221ENST00000488522 L3MBTL3Q96JM7 780 aaPredicted RBP16.43■□□□□ 0.22
TTC3-221ENST00000488522 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
TTC3-221ENST00000488522 CHADLQ6NUI6 762 aa16.42■□□□□ 0.22
TTC3-221ENST00000488522 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
TTC3-221ENST00000488522 CREBZFQ9NS37 354 aa16.42■□□□□ 0.22
TTC3-221ENST00000488522 SNED1Q8TER0 1413 aa16.42■□□□□ 0.22
TTC3-221ENST00000488522 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
TTC3-221ENST00000488522 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
TTC3-221ENST00000488522 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
TTC3-221ENST00000488522 HSPA1AP0DMV8 641 aaKnown RBP16.41■□□□□ 0.22
TTC3-221ENST00000488522 HSPA1BP0DMV9 641 aaKnown RBP16.41■□□□□ 0.22
TTC3-221ENST00000488522 ZNF652Q9Y2D9 606 aa16.41■□□□□ 0.22
TTC3-221ENST00000488522 NPR1P16066 1061 aa16.4■□□□□ 0.22
TTC3-221ENST00000488522 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
TTC3-221ENST00000488522 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
TTC3-221ENST00000488522 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
TTC3-221ENST00000488522 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
TTC3-221ENST00000488522 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
TTC3-221ENST00000488522 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.21
TTC3-221ENST00000488522 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
TTC3-221ENST00000488522 DDNO94850 711 aaPredicted RBP16.39■□□□□ 0.21
TTC3-221ENST00000488522 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
TTC3-221ENST00000488522 NBPF5PQ86XG9 351 aaPredicted RBP16.39■□□□□ 0.21
TTC3-221ENST00000488522 TNS4Q8IZW8 715 aa16.39■□□□□ 0.21
TTC3-221ENST00000488522 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
TTC3-221ENST00000488522 KDM3BQ7LBC6 1761 aa16.38■□□□□ 0.21
TTC3-221ENST00000488522 RIC1Q4ADV7 1423 aa16.38■□□□□ 0.21
TTC3-221ENST00000488522 NPHP1O15259 732 aa16.38■□□□□ 0.21
TTC3-221ENST00000488522 POTEIP0CG38 1075 aa16.38■□□□□ 0.21
TTC3-221ENST00000488522 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
TTC3-221ENST00000488522 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
TTC3-221ENST00000488522 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
TTC3-221ENST00000488522 PIP4K2AP48426 406 aaPredicted RBP16.37■□□□□ 0.21
TTC3-221ENST00000488522 TPTE2Q6XPS3 522 aa16.37■□□□□ 0.21
TTC3-221ENST00000488522 MCM10Q7L590 875 aa16.37■□□□□ 0.21
TTC3-221ENST00000488522 LDHDQ86WU2 507 aa16.37■□□□□ 0.21
TTC3-221ENST00000488522 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
TTC3-221ENST00000488522 TAF1DQ9H5J8 278 aaPredicted RBP16.36■□□□□ 0.21
TTC3-221ENST00000488522 CNTNAP1P78357 1384 aa16.36■□□□□ 0.21
TTC3-221ENST00000488522 IBTKQ9P2D0 1353 aaPredicted RBP16.36■□□□□ 0.21
TTC3-221ENST00000488522 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
TTC3-221ENST00000488522 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
TTC3-221ENST00000488522 CRY2Q49AN0 593 aa16.35■□□□□ 0.21
TTC3-221ENST00000488522 NIP7Q9Y221 180 aaKnown RBP eCLIP16.35■□□□□ 0.21
TTC3-221ENST00000488522 DLG5Q8TDM6 1919 aa16.35■□□□□ 0.21
TTC3-221ENST00000488522 NUP98P52948 1817 aa16.34■□□□□ 0.21
TTC3-221ENST00000488522 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
TTC3-221ENST00000488522 RTKN2Q8IZC4 609 aa16.34■□□□□ 0.21
TTC3-221ENST00000488522 ZNF541Q9H0D2 1346 aa16.34■□□□□ 0.21
TTC3-221ENST00000488522 FZD9O00144 591 aa16.33■□□□□ 0.2
TTC3-221ENST00000488522 ITGBL1O95965 494 aaPredicted RBP16.33■□□□□ 0.2
TTC3-221ENST00000488522 PSMD1Q99460 953 aa16.33■□□□□ 0.2
TTC3-221ENST00000488522 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
TTC3-221ENST00000488522 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
TTC3-221ENST00000488522 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
TTC3-221ENST00000488522 HLFQ16534 295 aa16.32■□□□□ 0.2
TTC3-221ENST00000488522 ABCC12Q96J65 1359 aa16.32■□□□□ 0.2
TTC3-221ENST00000488522 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
TTC3-221ENST00000488522 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
TTC3-221ENST00000488522 ZNF277Q9NRM2 450 aaPredicted RBP16.31■□□□□ 0.2
TTC3-221ENST00000488522 MKRN1Q9UHC7 482 aaKnown RBP16.31■□□□□ 0.2
TTC3-221ENST00000488522 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
TTC3-221ENST00000488522 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
TTC3-221ENST00000488522 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
TTC3-221ENST00000488522 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
TTC3-221ENST00000488522 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
TTC3-221ENST00000488522 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
TTC3-221ENST00000488522 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
TTC3-221ENST00000488522 COL4A5P29400 1685 aa16.3■□□□□ 0.2
TTC3-221ENST00000488522 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
TTC3-221ENST00000488522 EPHX2P34913 555 aa16.29■□□□□ 0.2
TTC3-221ENST00000488522 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
TTC3-221ENST00000488522 GPC2Q8N158 579 aa16.29■□□□□ 0.2
TTC3-221ENST00000488522 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
TTC3-221ENST00000488522 THSD7BQ9C0I4 1608 aa16.29■□□□□ 0.2
TTC3-221ENST00000488522 ERBB4Q15303 1308 aa16.28■□□□□ 0.2
TTC3-221ENST00000488522 GRIPAP1Q4V328 841 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms