RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 LAMB4A4D0S4 1761 aa15.92■□□□□ 0.14
COL1A2-210ENST00000488298 MAPK8IP3Q9UPT6 1336 aa15.92■□□□□ 0.14
COL1A2-210ENST00000488298 ZC3H4Q9UPT8 1303 aaKnown RBP15.92■□□□□ 0.14
COL1A2-210ENST00000488298 BTBD11A6QL63 1104 aa15.91■□□□□ 0.14
COL1A2-210ENST00000488298 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL1A2-210ENST00000488298 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
COL1A2-210ENST00000488298 KLRG1Q96E93 195 aa15.91■□□□□ 0.14
COL1A2-210ENST00000488298 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
COL1A2-210ENST00000488298 PRELPP51888 382 aa15.9■□□□□ 0.14
COL1A2-210ENST00000488298 RIPK4P57078 832 aa15.9■□□□□ 0.14
COL1A2-210ENST00000488298 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
COL1A2-210ENST00000488298 NPM2Q86SE8 214 aaKnown RBP15.9■□□□□ 0.14
COL1A2-210ENST00000488298 SMC1BQ8NDV3 1235 aa15.9■□□□□ 0.14
COL1A2-210ENST00000488298 ZNF622Q969S3 477 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL1A2-210ENST00000488298 ZNF330Q9Y3S2 320 aaPredicted RBP15.9■□□□□ 0.14
COL1A2-210ENST00000488298 ANP32CO43423 234 aa15.89■□□□□ 0.13
COL1A2-210ENST00000488298 ABCB7O75027 752 aa15.89■□□□□ 0.13
COL1A2-210ENST00000488298 NEFMP07197 916 aa15.89■□□□□ 0.13
COL1A2-210ENST00000488298 VEGFAP15692 232 aaPredicted RBP15.89■□□□□ 0.13
COL1A2-210ENST00000488298 PDZRN3Q9UPQ7 1066 aa15.89■□□□□ 0.13
COL1A2-210ENST00000488298 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
COL1A2-210ENST00000488298 AFDNP55196 1824 aaKnown RBP15.89■□□□□ 0.13
COL1A2-210ENST00000488298 SBF1O95248 1867 aa15.88■□□□□ 0.13
COL1A2-210ENST00000488298 PRAMEF22A3QJZ6 481 aa15.88■□□□□ 0.13
COL1A2-210ENST00000488298 PDE6BP35913 854 aa15.88■□□□□ 0.13
COL1A2-210ENST00000488298 IL6STP40189 918 aaPredicted RBP15.88■□□□□ 0.13
COL1A2-210ENST00000488298 FMNL2Q96PY5 1086 aa15.88■□□□□ 0.13
COL1A2-210ENST00000488298 BRIP1Q9BX63 1249 aa15.88■□□□□ 0.13
COL1A2-210ENST00000488298 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
COL1A2-210ENST00000488298 RRP7AQ9Y3A4 280 aaKnown RBP15.88■□□□□ 0.13
COL1A2-210ENST00000488298 NRXN2Q9P2S2 1712 aa15.88■□□□□ 0.13
COL1A2-210ENST00000488298 CARMIL3Q8ND23 1372 aa15.87■□□□□ 0.13
COL1A2-210ENST00000488298 NFKBIEO00221 500 aa15.87■□□□□ 0.13
COL1A2-210ENST00000488298 A1BGP04217 495 aa15.87■□□□□ 0.13
COL1A2-210ENST00000488298 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
COL1A2-210ENST00000488298 USP16Q9Y5T5 823 aa15.87■□□□□ 0.13
COL1A2-210ENST00000488298 PRR5LQ6MZQ0 368 aa15.86■□□□□ 0.13
COL1A2-210ENST00000488298 DPY19L2Q6NUT2 758 aa15.86■□□□□ 0.13
COL1A2-210ENST00000488298 CCDC24Q8N4L8 307 aa15.86■□□□□ 0.13
COL1A2-210ENST00000488298 SETDB2Q96T68 719 aa15.86■□□□□ 0.13
COL1A2-210ENST00000488298 SCN7AQ01118 1682 aa15.86■□□□□ 0.13
COL1A2-210ENST00000488298 WDR90Q96KV7 1748 aa15.85■□□□□ 0.13
COL1A2-210ENST00000488298 BCORQ6W2J9 1755 aa15.85■□□□□ 0.13
COL1A2-210ENST00000488298 NPHP1O15259 732 aa15.85■□□□□ 0.13
COL1A2-210ENST00000488298 C21orf2O43822 256 aa15.85■□□□□ 0.13
COL1A2-210ENST00000488298 EIF4A1P60842 406 aaKnown RBP15.85■□□□□ 0.13
COL1A2-210ENST00000488298 BABAM1Q9NWV8 329 aa15.85■□□□□ 0.13
COL1A2-210ENST00000488298 TNRC6CQ9HCJ0 1690 aaKnown RBP15.84■□□□□ 0.13
COL1A2-210ENST00000488298 APAF1O14727 1248 aa15.84■□□□□ 0.13
COL1A2-210ENST00000488298 CHL1O00533 1208 aa15.83■□□□□ 0.12
COL1A2-210ENST00000488298 CAMTA2O94983 1202 aa15.83■□□□□ 0.12
COL1A2-210ENST00000488298 SNRPA1P09661 255 aaKnown RBP15.83■□□□□ 0.12
COL1A2-210ENST00000488298 LMOD3Q0VAK6 560 aa15.83■□□□□ 0.12
COL1A2-210ENST00000488298 ERFEQ4G0M1 354 aa15.83■□□□□ 0.12
COL1A2-210ENST00000488298 CNBD1Q8NA66 436 aa15.83■□□□□ 0.12
COL1A2-210ENST00000488298 CNKSR1Q969H4 720 aa15.83■□□□□ 0.12
COL1A2-210ENST00000488298 MRS2Q9HD23 443 aa15.83■□□□□ 0.12
COL1A2-210ENST00000488298 POTECB2RU33 542 aa15.82■□□□□ 0.12
COL1A2-210ENST00000488298 NBPF26B4DH59 902 aa15.82■□□□□ 0.12
COL1A2-210ENST00000488298 ZNF853P0CG23 659 aa15.82■□□□□ 0.12
COL1A2-210ENST00000488298 ST5P78524 1137 aa15.82■□□□□ 0.12
COL1A2-210ENST00000488298 NEUROD2Q15784 382 aa15.82■□□□□ 0.12
COL1A2-210ENST00000488298 NBPF10Q6P3W6 841 aaKnown RBP15.82■□□□□ 0.12
COL1A2-210ENST00000488298 DZIP3Q86Y13 1208 aaKnown RBP15.82■□□□□ 0.12
COL1A2-210ENST00000488298 NBPF15Q8N660 670 aa15.82■□□□□ 0.12
COL1A2-210ENST00000488298 DLEC1Q9Y238 1755 aa15.81■□□□□ 0.12
COL1A2-210ENST00000488298 COL13A1Q5TAT6 717 aaPredicted RBP15.8■□□□□ 0.12
COL1A2-210ENST00000488298 STYK1Q6J9G0 422 aa15.8■□□□□ 0.12
COL1A2-210ENST00000488298 MASTLQ96GX5 879 aa15.8■□□□□ 0.12
COL1A2-210ENST00000488298 TAOK3Q9H2K8 898 aa15.8■□□□□ 0.12
COL1A2-210ENST00000488298 LTBP3Q9NS15 1303 aa15.79■□□□□ 0.12
COL1A2-210ENST00000488298 SRGNP10124 158 aa15.79■□□□□ 0.12
COL1A2-210ENST00000488298 PIP4K2AP48426 406 aaPredicted RBP15.79■□□□□ 0.12
COL1A2-210ENST00000488298 SOGA3Q5TF21 947 aa15.79■□□□□ 0.12
COL1A2-210ENST00000488298 CLEC4GQ6UXB4 293 aa15.79■□□□□ 0.12
COL1A2-210ENST00000488298 CCDC88AQ3V6T2 1871 aa15.78■□□□□ 0.12
COL1A2-210ENST00000488298 POLA2Q14181 598 aa15.78■□□□□ 0.12
COL1A2-210ENST00000488298 CCDC27Q2M243 656 aa15.78■□□□□ 0.12
COL1A2-210ENST00000488298 PRPF40BQ6NWY9 871 aaKnown RBP15.78■□□□□ 0.12
COL1A2-210ENST00000488298 LRP10Q7Z4F1 713 aa15.78■□□□□ 0.12
COL1A2-210ENST00000488298 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
COL1A2-210ENST00000488298 TSPYL4Q9UJ04 414 aa15.78■□□□□ 0.12
COL1A2-210ENST00000488298 ZNF652Q9Y2D9 606 aa15.78■□□□□ 0.12
COL1A2-210ENST00000488298 NUP98P52948 1817 aa15.78■□□□□ 0.12
COL1A2-210ENST00000488298 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
COL1A2-210ENST00000488298 ANKRD31Q8N7Z5 1873 aa15.77■□□□□ 0.11
COL1A2-210ENST00000488298 DDNO94850 711 aaPredicted RBP15.76■□□□□ 0.11
COL1A2-210ENST00000488298 PDIA6Q15084 440 aa15.76■□□□□ 0.11
COL1A2-210ENST00000488298 KRT24Q2M2I5 525 aa15.75■□□□□ 0.11
COL1A2-210ENST00000488298 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
COL1A2-210ENST00000488298 TIAM2Q8IVF5 1701 aa15.74■□□□□ 0.11
COL1A2-210ENST00000488298 HSPA1AP0DMV8 641 aaKnown RBP15.74■□□□□ 0.11
COL1A2-210ENST00000488298 HSPA1BP0DMV9 641 aaKnown RBP15.74■□□□□ 0.11
COL1A2-210ENST00000488298 NPR1P16066 1061 aa15.74■□□□□ 0.11
COL1A2-210ENST00000488298 CCDC93Q567U6 631 aa15.74■□□□□ 0.11
COL1A2-210ENST00000488298 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
COL1A2-210ENST00000488298 WWC1Q8IX03 1113 aa15.74■□□□□ 0.11
COL1A2-210ENST00000488298 C7orf43Q8WVR3 580 aa15.74■□□□□ 0.11
COL1A2-210ENST00000488298 MBIPQ9NS73 344 aa15.74■□□□□ 0.11
COL1A2-210ENST00000488298 NIP7Q9Y221 180 aaKnown RBP eCLIP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms