RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TM4SF1P30408 202 aa22.15■■□□□ 1.14
SHROOM1-205ENST00000488072 NLGN1Q8N2Q7 840 aa22.15■■□□□ 1.14
SHROOM1-205ENST00000488072 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
SHROOM1-205ENST00000488072 SRCAPQ6ZRS2 3230 aa22.14■■□□□ 1.14
SHROOM1-205ENST00000488072 ERBB4Q15303 1308 aa22.14■■□□□ 1.14
SHROOM1-205ENST00000488072 POLD1P28340 1107 aa22.14■■□□□ 1.13
SHROOM1-205ENST00000488072 LRP5O75197 1615 aa22.13■■□□□ 1.13
SHROOM1-205ENST00000488072 PPP1R1BQ9UD71 204 aaPredicted RBP22.13■■□□□ 1.13
SHROOM1-205ENST00000488072 COL24A1Q17RW2 1714 aa22.12■■□□□ 1.13
SHROOM1-205ENST00000488072 NPM2Q86SE8 214 aaKnown RBP22.12■■□□□ 1.13
SHROOM1-205ENST00000488072 FHDC1Q9C0D6 1143 aaPredicted RBP22.12■■□□□ 1.13
SHROOM1-205ENST00000488072 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
SHROOM1-205ENST00000488072 MAP3K15Q6ZN16 1313 aa22.11■■□□□ 1.13
SHROOM1-205ENST00000488072 POLRMTO00411 1230 aaKnown RBP22.11■■□□□ 1.13
SHROOM1-205ENST00000488072 CCDC30Q5VVM6 783 aa22.11■■□□□ 1.13
SHROOM1-205ENST00000488072 YTHDC1Q96MU7 727 aaKnown RBP22.11■■□□□ 1.13
SHROOM1-205ENST00000488072 FAM177BA6PVY3 158 aa22.1■■□□□ 1.13
SHROOM1-205ENST00000488072 GPTP24298 496 aa22.1■■□□□ 1.13
SHROOM1-205ENST00000488072 SLC4A2P04920 1241 aa22.09■■□□□ 1.13
SHROOM1-205ENST00000488072 KIF6Q6ZMV9 814 aa22.09■■□□□ 1.13
SHROOM1-205ENST00000488072 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
SHROOM1-205ENST00000488072 SCN7AQ01118 1682 aa22.09■■□□□ 1.13
SHROOM1-205ENST00000488072 HYPKQ9NX55 129 aa22.08■■□□□ 1.13
SHROOM1-205ENST00000488072 PARP3Q9Y6F1 533 aa22.08■■□□□ 1.13
SHROOM1-205ENST00000488072 ZBED9Q6R2W3 1325 aa22.07■■□□□ 1.12
SHROOM1-205ENST00000488072 SERPINB2P05120 415 aa22.07■■□□□ 1.12
SHROOM1-205ENST00000488072 BCL2L13Q9BXK5 485 aa22.07■■□□□ 1.12
SHROOM1-205ENST00000488072 WWC3Q9ULE0 1092 aa22.07■■□□□ 1.12
SHROOM1-205ENST00000488072 BCORQ6W2J9 1755 aa22.07■■□□□ 1.12
SHROOM1-205ENST00000488072 SYT17Q9BSW7 474 aa22.06■■□□□ 1.12
SHROOM1-205ENST00000488072 NIP7Q9Y221 180 aaKnown RBP eCLIP22.06■■□□□ 1.12
SHROOM1-205ENST00000488072 CARMIL3Q8ND23 1372 aa22.06■■□□□ 1.12
SHROOM1-205ENST00000488072 UBN2Q6ZU65 1347 aa22.06■■□□□ 1.12
SHROOM1-205ENST00000488072 ERVV-1B6SEH8 477 aa22.05■■□□□ 1.12
SHROOM1-205ENST00000488072 GIGYF2Q6Y7W6 1299 aaKnown RBP22.04■■□□□ 1.12
SHROOM1-205ENST00000488072 ANKRD13DQ6ZTN6 518 aa22.04■■□□□ 1.12
SHROOM1-205ENST00000488072 SSH1Q8WYL5 1049 aa22.04■■□□□ 1.12
SHROOM1-205ENST00000488072 STK31Q9BXU1 1019 aa22.04■■□□□ 1.12
SHROOM1-205ENST00000488072 ATP5J2-PTCD1G3V325 749 aa22.03■■□□□ 1.12
SHROOM1-205ENST00000488072 ZNF34Q8IZ26 560 aa22.03■■□□□ 1.12
SHROOM1-205ENST00000488072 SETDB2Q96T68 719 aa22.03■■□□□ 1.12
SHROOM1-205ENST00000488072 SUSD4Q5VX71 490 aa22.02■■□□□ 1.12
SHROOM1-205ENST00000488072 PRR5LQ6MZQ0 368 aa22.02■■□□□ 1.12
SHROOM1-205ENST00000488072 CLEC4GQ6UXB4 293 aa22.02■■□□□ 1.12
SHROOM1-205ENST00000488072 MRPL50Q8N5N7 158 aaKnown RBP22.02■■□□□ 1.12
SHROOM1-205ENST00000488072 PLBD2Q8NHP8 589 aa22.02■■□□□ 1.12
SHROOM1-205ENST00000488072 FLIIQ13045 1269 aa22.01■■□□□ 1.11
SHROOM1-205ENST00000488072 RIC3Q7Z5B4 369 aa22.01■■□□□ 1.11
SHROOM1-205ENST00000488072 NUTM1Q86Y26 1132 aa22.01■■□□□ 1.11
SHROOM1-205ENST00000488072 SYNE4Q8N205 404 aa22.01■■□□□ 1.11
SHROOM1-205ENST00000488072 ZNF652Q9Y2D9 606 aa22.01■■□□□ 1.11
SHROOM1-205ENST00000488072 ADCY9O60503 1353 aa22■■□□□ 1.11
SHROOM1-205ENST00000488072 PI4KAP2A4QPH2 592 aa22■■□□□ 1.11
SHROOM1-205ENST00000488072 F6X3S4 739 aa22■■□□□ 1.11
SHROOM1-205ENST00000488072 PI4KAP1Q8N8J0 262 aa22■■□□□ 1.11
SHROOM1-205ENST00000488072 MAP3K2Q9Y2U5 619 aa22■■□□□ 1.11
SHROOM1-205ENST00000488072 C10orf71Q711Q0 1435 aa21.99■■□□□ 1.11
SHROOM1-205ENST00000488072 CHRNA5P30532 468 aa21.99■■□□□ 1.11
SHROOM1-205ENST00000488072 TCIRG1Q13488 830 aa21.99■■□□□ 1.11
SHROOM1-205ENST00000488072 JARID2Q92833 1246 aaPredicted RBP21.99■■□□□ 1.11
SHROOM1-205ENST00000488072 MYD88Q99836 296 aa21.99■■□□□ 1.11
SHROOM1-205ENST00000488072 A0A0G2JLW4 131 aa21.98■■□□□ 1.11
SHROOM1-205ENST00000488072 NBPF5PQ86XG9 351 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-205ENST00000488072 NUP98P52948 1817 aa21.98■■□□□ 1.11
SHROOM1-205ENST00000488072 AFDNP55196 1824 aaKnown RBP21.98■■□□□ 1.11
SHROOM1-205ENST00000488072 ATP10DQ9P241 1426 aa21.97■■□□□ 1.11
SHROOM1-205ENST00000488072 DPEP1P16444 411 aa21.97■■□□□ 1.11
SHROOM1-205ENST00000488072 ERFEQ4G0M1 354 aa21.97■■□□□ 1.11
SHROOM1-205ENST00000488072 NLRP10Q86W26 655 aa21.97■■□□□ 1.11
SHROOM1-205ENST00000488072 ISCA1Q9BUE6 129 aa21.97■■□□□ 1.11
SHROOM1-205ENST00000488072 ABCC12Q96J65 1359 aa21.97■■□□□ 1.11
SHROOM1-205ENST00000488072 FKBP5Q13451 457 aaPredicted RBP21.96■■□□□ 1.11
SHROOM1-205ENST00000488072 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
SHROOM1-205ENST00000488072 KSR2Q6VAB6 950 aa21.96■■□□□ 1.11
SHROOM1-205ENST00000488072 CNBD1Q8NA66 436 aa21.96■■□□□ 1.11
SHROOM1-205ENST00000488072 CD2APQ9Y5K6 639 aa21.96■■□□□ 1.11
SHROOM1-205ENST00000488072 NTSR2O95665 410 aa21.95■■□□□ 1.1
SHROOM1-205ENST00000488072 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
SHROOM1-205ENST00000488072 C3orf67Q6ZVT6 689 aa21.95■■□□□ 1.1
SHROOM1-205ENST00000488072 METTL22Q9BUU2 404 aaPredicted RBP21.95■■□□□ 1.1
SHROOM1-205ENST00000488072 NRXN2Q9P2S2 1712 aa21.94■■□□□ 1.1
SHROOM1-205ENST00000488072 BCAR3O75815 825 aa21.94■■□□□ 1.1
SHROOM1-205ENST00000488072 IGKV5-2P06315 115 aa21.94■■□□□ 1.1
SHROOM1-205ENST00000488072 KCNA3P22001 575 aa21.94■■□□□ 1.1
SHROOM1-205ENST00000488072 CWF19L2Q2TBE0 894 aaKnown RBP21.94■■□□□ 1.1
SHROOM1-205ENST00000488072 SMC4Q9NTJ3 1288 aa21.94■■□□□ 1.1
SHROOM1-205ENST00000488072 TNNQ9UQP3 1299 aa21.94■■□□□ 1.1
SHROOM1-205ENST00000488072 PXDNLA1KZ92 1463 aa21.94■■□□□ 1.1
SHROOM1-205ENST00000488072 RGL2O15211 777 aa21.93■■□□□ 1.1
SHROOM1-205ENST00000488072 ARFGEF2Q9Y6D5 1785 aa21.92■■□□□ 1.1
SHROOM1-205ENST00000488072 NPHP1O15259 732 aa21.92■■□□□ 1.1
SHROOM1-205ENST00000488072 DDX58O95786 925 aaKnown RBP21.92■■□□□ 1.1
SHROOM1-205ENST00000488072 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
SHROOM1-205ENST00000488072 KIAA1551Q9HCM1 1747 aa21.92■■□□□ 1.1
SHROOM1-205ENST00000488072 HCLS1P14317 486 aaPredicted RBP21.91■■□□□ 1.1
SHROOM1-205ENST00000488072 HSP90AB3PQ58FF7 597 aa21.91■■□□□ 1.1
SHROOM1-205ENST00000488072 TPTE2Q6XPS3 522 aa21.91■■□□□ 1.1
SHROOM1-205ENST00000488072 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
SHROOM1-205ENST00000488072 DNAAF4Q8WXU2 420 aa21.91■■□□□ 1.1
SHROOM1-205ENST00000488072 UTP14AQ9BVJ6 771 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms