RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 DZIP3Q86Y13 1208 aaKnown RBP9.49□□□□□ -0.89
TNFSF4-203ENST00000488053 CYP4X1Q8N118 509 aa9.49□□□□□ -0.89
TNFSF4-203ENST00000488053 SNIP1Q8TAD8 396 aaKnown RBP9.49□□□□□ -0.89
TNFSF4-203ENST00000488053 TIMELESSQ9UNS1 1208 aa9.49□□□□□ -0.89
TNFSF4-203ENST00000488053 MAP4K5Q9Y4K4 846 aa9.49□□□□□ -0.89
TNFSF4-203ENST00000488053 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
TNFSF4-203ENST00000488053 TNFRSF10AO00220 468 aa9.48□□□□□ -0.89
TNFSF4-203ENST00000488053 ZNF772Q68DY9 489 aaPredicted RBP9.48□□□□□ -0.89
TNFSF4-203ENST00000488053 TRIM67Q6ZTA4 783 aa9.48□□□□□ -0.89
TNFSF4-203ENST00000488053 CDK15Q96Q40 435 aa9.48□□□□□ -0.89
TNFSF4-203ENST00000488053 PDZRN3Q9UPQ7 1066 aa9.48□□□□□ -0.89
TNFSF4-203ENST00000488053 NBPF20Q3BBV1 942 aa9.47□□□□□ -0.89
TNFSF4-203ENST00000488053 AFF2P51816 1311 aa9.47□□□□□ -0.89
TNFSF4-203ENST00000488053 PPLO60437 1756 aa9.46□□□□□ -0.9
TNFSF4-203ENST00000488053 TTC24A2A3L6 582 aaPredicted RBP9.46□□□□□ -0.9
TNFSF4-203ENST00000488053 ARID5BQ14865 1188 aa9.46□□□□□ -0.9
TNFSF4-203ENST00000488053 C8orf37Q96NL8 207 aa9.46□□□□□ -0.9
TNFSF4-203ENST00000488053 TLL2Q9Y6L7 1015 aa9.46□□□□□ -0.9
TNFSF4-203ENST00000488053 ROBO2Q9HCK4 1378 aa9.46□□□□□ -0.9
TNFSF4-203ENST00000488053 SETD5Q9C0A6 1442 aa9.46□□□□□ -0.9
TNFSF4-203ENST00000488053 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
TNFSF4-203ENST00000488053 RXRBP28702 533 aa9.45□□□□□ -0.9
TNFSF4-203ENST00000488053 SEMA3FQ13275 785 aa9.45□□□□□ -0.9
TNFSF4-203ENST00000488053 VASH1Q7L8A9 365 aaPredicted RBP9.45□□□□□ -0.9
TNFSF4-203ENST00000488053 LRRC59Q96AG4 307 aaKnown RBP9.45□□□□□ -0.9
TNFSF4-203ENST00000488053 TOR4AQ9NXH8 423 aa9.45□□□□□ -0.9
TNFSF4-203ENST00000488053 PNPLA6Q8IY17 1366 aa9.45□□□□□ -0.9
TNFSF4-203ENST00000488053 HFM1A2PYH4 1435 aa9.45□□□□□ -0.9
TNFSF4-203ENST00000488053 POM121CA8CG34 1229 aa9.44□□□□□ -0.9
TNFSF4-203ENST00000488053 ADAMTS2O95450 1211 aa9.44□□□□□ -0.9
TNFSF4-203ENST00000488053 ADH1CP00326 375 aa9.44□□□□□ -0.9
TNFSF4-203ENST00000488053 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
TNFSF4-203ENST00000488053 C1orf167Q5SNV9 1468 aa9.44□□□□□ -0.9
TNFSF4-203ENST00000488053 PTCH1Q13635 1447 aa9.43□□□□□ -0.9
TNFSF4-203ENST00000488053 LAPTM4AQ15012 233 aa9.43□□□□□ -0.9
TNFSF4-203ENST00000488053 KCTD15Q96SI1 283 aaPredicted RBP9.43□□□□□ -0.9
TNFSF4-203ENST00000488053 ALG2Q9H553 416 aa9.43□□□□□ -0.9
TNFSF4-203ENST00000488053 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
TNFSF4-203ENST00000488053 NR5A1Q13285 461 aa9.42□□□□□ -0.9
TNFSF4-203ENST00000488053 RGL3Q3MIN7 710 aa9.42□□□□□ -0.9
TNFSF4-203ENST00000488053 RPGRIP1LQ68CZ1 1315 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 FSHRP23945 695 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 GRM5P41594 1212 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 RNF20Q5VTR2 975 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 CCDC125Q86Z20 511 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 SEPT12Q8IYM1 358 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 GLMNQ92990 594 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 NGLY1Q96IV0 654 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 QTRT2Q9H974 415 aaKnown RBP9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 STK26Q9P289 416 aa9.41□□□□□ -0.9
TNFSF4-203ENST00000488053 RGS12O14924 1447 aa9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 ADGRF5Q8IZF2 1346 aa9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 ESPNB1AK53 854 aa9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 NRG2O14511 850 aaPredicted RBP9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 GFRA3O60609 400 aa9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 XPCQ01831 940 aaPredicted RBP9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 HDGFL1Q5TGJ6 251 aa9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 LAMC1P11047 1609 aa9.4□□□□□ -0.9
TNFSF4-203ENST00000488053 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
TNFSF4-203ENST00000488053 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
TNFSF4-203ENST00000488053 J3QL48 77 aa9.39□□□□□ -0.91
TNFSF4-203ENST00000488053 SMPD1P17405 629 aa9.39□□□□□ -0.91
TNFSF4-203ENST00000488053 ESCO1Q5FWF5 840 aa9.39□□□□□ -0.91
TNFSF4-203ENST00000488053 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
TNFSF4-203ENST00000488053 CDK12Q9NYV4 1490 aaPredicted RBP9.39□□□□□ -0.91
TNFSF4-203ENST00000488053 IFT172Q9UG01 1749 aa9.39□□□□□ -0.91
TNFSF4-203ENST00000488053 GIGYF1O75420 1035 aaPredicted RBP9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 RBM6P78332 1123 aaKnown RBP9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 SLFNL1Q499Z3 407 aa9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 WAPLQ7Z5K2 1190 aa9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 ADAMTS19Q8TE59 1207 aa9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 MPHOSPH9Q99550 1183 aa9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 USP21Q9UK80 565 aa9.38□□□□□ -0.91
TNFSF4-203ENST00000488053 PLEKHH1Q9ULM0 1364 aa9.37□□□□□ -0.91
TNFSF4-203ENST00000488053 NNTQ13423 1086 aa9.37□□□□□ -0.91
TNFSF4-203ENST00000488053 INTS6LQ5JSJ4 861 aaKnown RBP9.37□□□□□ -0.91
TNFSF4-203ENST00000488053 CCDC116Q8IYX3 515 aa9.37□□□□□ -0.91
TNFSF4-203ENST00000488053 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
TNFSF4-203ENST00000488053 PRAG1Q86YV5 1406 aa9.37□□□□□ -0.91
TNFSF4-203ENST00000488053 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
TNFSF4-203ENST00000488053 COL22A1Q8NFW1 1626 aaPredicted RBP9.36□□□□□ -0.91
TNFSF4-203ENST00000488053 FAM187AA6NFU0 413 aa9.36□□□□□ -0.91
TNFSF4-203ENST00000488053 FOXO3O43524 673 aa9.36□□□□□ -0.91
TNFSF4-203ENST00000488053 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
TNFSF4-203ENST00000488053 NPHP3Q7Z494 1330 aa9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 PXDNQ92626 1479 aa9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 RGPD8O14715 1765 aaPredicted RBP9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 DGAT1O75907 488 aa9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 NR3C2P08235 984 aa9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 KNDC1Q76NI1 1749 aa9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 FMN2Q9NZ56 1722 aa9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 MARF1Q9Y4F3 1742 aaKnown RBP9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 LRPPRCP42704 1394 aaKnown RBP9.35□□□□□ -0.91
TNFSF4-203ENST00000488053 PIK3C2GO75747 1445 aa9.34□□□□□ -0.91
TNFSF4-203ENST00000488053 RAB15P59190 212 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms