RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 COPS6Q7L5N1 327 aa13.37□□□□□ -0.27
HLA-DMB-261ENST00000487996 LRP10Q7Z4F1 713 aa13.37□□□□□ -0.27
HLA-DMB-261ENST00000487996 ITPRIPQ8IWB1 547 aa13.37□□□□□ -0.27
HLA-DMB-261ENST00000487996 XAGE3Q8WTP9 111 aa13.37□□□□□ -0.27
HLA-DMB-261ENST00000487996 DNAAF4Q8WXU2 420 aa13.37□□□□□ -0.27
HLA-DMB-261ENST00000487996 TAF1LQ8IZX4 1826 aa13.37□□□□□ -0.27
HLA-DMB-261ENST00000487996 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 RLBP1P12271 317 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 INTS3Q68E01 1043 aaKnown RBP13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 KIF6Q6ZMV9 814 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 ANKRD13DQ6ZTN6 518 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 ZBTB1Q9Y2K1 713 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 A0A087WZG4 1122 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 NEXNQ0ZGT2 675 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 INTS5Q6P9B9 1019 aaKnown RBP13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 SLC4A10Q6U841 1118 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 PLBD2Q8NHP8 589 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 ZNF330Q9Y3S2 320 aaPredicted RBP13.36□□□□□ -0.27
HLA-DMB-261ENST00000487996 N4BP2Q86UW6 1770 aaPredicted RBP13.35□□□□□ -0.27
HLA-DMB-261ENST00000487996 MYH14Q7Z406 1995 aaKnown RBP13.35□□□□□ -0.27
HLA-DMB-261ENST00000487996 PIP4K2AP48426 406 aaPredicted RBP13.35□□□□□ -0.27
HLA-DMB-261ENST00000487996 TXNRD1Q16881 649 aa13.35□□□□□ -0.27
HLA-DMB-261ENST00000487996 MAP3K2Q9Y2U5 619 aa13.35□□□□□ -0.27
HLA-DMB-261ENST00000487996 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
HLA-DMB-261ENST00000487996 ADCY9O60503 1353 aa13.34□□□□□ -0.27
HLA-DMB-261ENST00000487996 F6X3S4 739 aa13.34□□□□□ -0.27
HLA-DMB-261ENST00000487996 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
HLA-DMB-261ENST00000487996 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
HLA-DMB-261ENST00000487996 AK7Q96M32 723 aa13.34□□□□□ -0.27
HLA-DMB-261ENST00000487996 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
HLA-DMB-261ENST00000487996 C4BP0C0L5 1744 aa13.34□□□□□ -0.27
HLA-DMB-261ENST00000487996 BAG6P46379 1132 aa13.33□□□□□ -0.27
HLA-DMB-261ENST00000487996 SRCIN1Q9C0H9 1055 aa13.33□□□□□ -0.27
HLA-DMB-261ENST00000487996 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 RPS6KA4O75676 772 aa13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 ALDH1L1O75891 902 aa13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 HSP90AB3PQ58FF7 597 aa13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 LINS1Q8NG48 757 aa13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 EXOC6Q8TAG9 804 aa13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 METTL22Q9BUU2 404 aaPredicted RBP13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 RTCBQ9Y3I0 505 aaKnown RBP13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 ARFGEF2Q9Y6D5 1785 aa13.33□□□□□ -0.28
HLA-DMB-261ENST00000487996 COL15A1P39059 1388 aa13.32□□□□□ -0.28
HLA-DMB-261ENST00000487996 MAP3K15Q6ZN16 1313 aa13.32□□□□□ -0.28
HLA-DMB-261ENST00000487996 ERVV-1B6SEH8 477 aa13.32□□□□□ -0.28
HLA-DMB-261ENST00000487996 RGL2O15211 777 aa13.32□□□□□ -0.28
HLA-DMB-261ENST00000487996 DZIP3Q86Y13 1208 aaKnown RBP13.32□□□□□ -0.28
HLA-DMB-261ENST00000487996 ARXQ96QS3 562 aa13.32□□□□□ -0.28
HLA-DMB-261ENST00000487996 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
HLA-DMB-261ENST00000487996 HDAC5Q9UQL6 1122 aa13.32□□□□□ -0.28
HLA-DMB-261ENST00000487996 GNPATO15228 680 aa13.31□□□□□ -0.28
HLA-DMB-261ENST00000487996 KCNQ4P56696 695 aa13.31□□□□□ -0.28
HLA-DMB-261ENST00000487996 BEND3Q5T5X7 828 aa13.31□□□□□ -0.28
HLA-DMB-261ENST00000487996 TTLL7Q6ZT98 887 aa13.31□□□□□ -0.28
HLA-DMB-261ENST00000487996 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
HLA-DMB-261ENST00000487996 NUP188Q5SRE5 1749 aa13.31□□□□□ -0.28
HLA-DMB-261ENST00000487996 GNAI3P08754 354 aa13.3□□□□□ -0.28
HLA-DMB-261ENST00000487996 PPP4R2Q9NY27 417 aa13.3□□□□□ -0.28
HLA-DMB-261ENST00000487996 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
HLA-DMB-261ENST00000487996 ZBTB3Q9H5J0 574 aa13.3□□□□□ -0.28
HLA-DMB-261ENST00000487996 ZBTB7BO15156 539 aaPredicted RBP13.29□□□□□ -0.28
HLA-DMB-261ENST00000487996 SSFA2P28290 1259 aa13.29□□□□□ -0.28
HLA-DMB-261ENST00000487996 PROM2Q8N271 834 aa13.29□□□□□ -0.28
HLA-DMB-261ENST00000487996 MYD88Q99836 296 aa13.29□□□□□ -0.28
HLA-DMB-261ENST00000487996 TCIRG1Q13488 830 aa13.28□□□□□ -0.28
HLA-DMB-261ENST00000487996 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
HLA-DMB-261ENST00000487996 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
HLA-DMB-261ENST00000487996 CAMKK2Q96RR4 588 aa13.28□□□□□ -0.28
HLA-DMB-261ENST00000487996 ZBTB40Q9NUA8 1239 aa13.28□□□□□ -0.28
HLA-DMB-261ENST00000487996 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
HLA-DMB-261ENST00000487996 ZPR1O75312 459 aa13.27□□□□□ -0.28
HLA-DMB-261ENST00000487996 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.28
HLA-DMB-261ENST00000487996 CCDC191Q8NCU4 936 aa13.27□□□□□ -0.28
HLA-DMB-261ENST00000487996 FLAD1Q8NFF5 587 aa13.27□□□□□ -0.28
HLA-DMB-261ENST00000487996 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.28
HLA-DMB-261ENST00000487996 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.28
HLA-DMB-261ENST00000487996 NUP98P52948 1817 aa13.27□□□□□ -0.28
HLA-DMB-261ENST00000487996 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.28
HLA-DMB-261ENST00000487996 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.29
HLA-DMB-261ENST00000487996 BCORQ6W2J9 1755 aa13.27□□□□□ -0.29
HLA-DMB-261ENST00000487996 NEURL1BA8MQ27 555 aa13.27□□□□□ -0.29
HLA-DMB-261ENST00000487996 UBTFL1P0CB47 393 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-261ENST00000487996 RFC4P35249 363 aa13.27□□□□□ -0.29
HLA-DMB-261ENST00000487996 EN1Q05925 392 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-261ENST00000487996 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
HLA-DMB-261ENST00000487996 SCN7AQ01118 1682 aa13.26□□□□□ -0.29
HLA-DMB-261ENST00000487996 GRM8O00222 908 aa13.26□□□□□ -0.29
HLA-DMB-261ENST00000487996 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
HLA-DMB-261ENST00000487996 IGKV5-2P06315 115 aa13.26□□□□□ -0.29
HLA-DMB-261ENST00000487996 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
HLA-DMB-261ENST00000487996 CWC25Q9NXE8 425 aaPredicted RBP13.26□□□□□ -0.29
HLA-DMB-261ENST00000487996 TFCP2L1Q9NZI6 479 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms