RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
UBR3-211ENST00000487689 PSME1Q06323 249 aa8.59□□□□□ -1.03
UBR3-211ENST00000487689 LAMC2Q13753 1193 aa8.59□□□□□ -1.03
UBR3-211ENST00000487689 ZDHHC3Q9NYG2 299 aa8.59□□□□□ -1.03
UBR3-211ENST00000487689 NOD1Q9Y239 953 aa8.59□□□□□ -1.03
UBR3-211ENST00000487689 COG6Q9Y2V7 657 aa8.59□□□□□ -1.03
UBR3-211ENST00000487689 HYAL3O43820 417 aaPredicted RBP8.58□□□□□ -1.04
UBR3-211ENST00000487689 SKIP12755 728 aa8.58□□□□□ -1.04
UBR3-211ENST00000487689 SAMD5Q5TGI4 173 aa8.58□□□□□ -1.04
UBR3-211ENST00000487689 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
UBR3-211ENST00000487689 ZNF295-AS1Q8N0V1 137 aa8.58□□□□□ -1.04
UBR3-211ENST00000487689 GOLGA2P5Q9HBQ8 144 aa8.58□□□□□ -1.04
UBR3-211ENST00000487689 SERTAD1Q9UHV2 236 aa8.58□□□□□ -1.04
UBR3-211ENST00000487689 CHIC2Q9UKJ5 165 aa8.58□□□□□ -1.04
UBR3-211ENST00000487689 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
UBR3-211ENST00000487689 BACH1O14867 736 aa8.57□□□□□ -1.04
UBR3-211ENST00000487689 H2AFB1P0C5Y9 115 aa8.57□□□□□ -1.04
UBR3-211ENST00000487689 H2AFB2P0C5Z0 115 aa8.57□□□□□ -1.04
UBR3-211ENST00000487689 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
UBR3-211ENST00000487689 PRDM6Q9NQX0 595 aa8.57□□□□□ -1.04
UBR3-211ENST00000487689 STARD13Q9Y3M8 1113 aa8.57□□□□□ -1.04
UBR3-211ENST00000487689 ADARB2-AS1A8MUL3 147 aa8.56□□□□□ -1.04
UBR3-211ENST00000487689 SIN3BO75182 1162 aa8.56□□□□□ -1.04
UBR3-211ENST00000487689 ALBP02768 609 aa8.56□□□□□ -1.04
UBR3-211ENST00000487689 MICALL1Q8N3F8 863 aa8.56□□□□□ -1.04
UBR3-211ENST00000487689 USP3Q9Y6I4 520 aa8.56□□□□□ -1.04
UBR3-211ENST00000487689 NFATC2IPQ8NCF5 419 aa8.55□□□□□ -1.04
UBR3-211ENST00000487689 CABP1Q9NZU7 370 aa8.55□□□□□ -1.04
UBR3-211ENST00000487689 IQSEC3Q9UPP2 1182 aaPredicted RBP8.55□□□□□ -1.04
UBR3-211ENST00000487689 C9orf172C9J069 976 aa8.54□□□□□ -1.04
UBR3-211ENST00000487689 CDK2AP1O14519 115 aa8.54□□□□□ -1.04
UBR3-211ENST00000487689 NID1P14543 1247 aa8.54□□□□□ -1.04
UBR3-211ENST00000487689 GTF2IP78347 998 aa8.53□□□□□ -1.04
UBR3-211ENST00000487689 ADGRE1Q14246 886 aa8.53□□□□□ -1.04
UBR3-211ENST00000487689 TRIM50Q86XT4 487 aa8.53□□□□□ -1.04
UBR3-211ENST00000487689 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
UBR3-211ENST00000487689 PARP3Q9Y6F1 533 aa8.53□□□□□ -1.04
UBR3-211ENST00000487689 A6NJY4 79 aa8.52□□□□□ -1.05
UBR3-211ENST00000487689 MBTPS1Q14703 1052 aa8.52□□□□□ -1.05
UBR3-211ENST00000487689 MTFR1Q15390 333 aa8.52□□□□□ -1.05
UBR3-211ENST00000487689 TNFRSF25Q93038 417 aa8.52□□□□□ -1.05
UBR3-211ENST00000487689 SLC4A9Q96Q91 983 aa8.52□□□□□ -1.05
UBR3-211ENST00000487689 TMEM229AB2RXF0 380 aa8.51□□□□□ -1.05
UBR3-211ENST00000487689 TXLNAP40222 546 aa8.51□□□□□ -1.05
UBR3-211ENST00000487689 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
UBR3-211ENST00000487689 SLC30A3Q99726 388 aa8.51□□□□□ -1.05
UBR3-211ENST00000487689 ALG2Q9H553 416 aa8.51□□□□□ -1.05
UBR3-211ENST00000487689 NEUROD4Q9HD90 331 aa8.51□□□□□ -1.05
UBR3-211ENST00000487689 PIK3CDO00329 1044 aa8.5□□□□□ -1.05
UBR3-211ENST00000487689 SELPP16109 830 aa8.5□□□□□ -1.05
UBR3-211ENST00000487689 ADH7P40394 386 aa8.5□□□□□ -1.05
UBR3-211ENST00000487689 ATP1A2P50993 1020 aa8.5□□□□□ -1.05
UBR3-211ENST00000487689 NCOA4Q13772 614 aa8.5□□□□□ -1.05
UBR3-211ENST00000487689 LRRC69Q6ZNQ3 347 aa8.5□□□□□ -1.05
UBR3-211ENST00000487689 TXNRD3Q86VQ6 643 aa8.5□□□□□ -1.05
UBR3-211ENST00000487689 CHMP3Q9Y3E7 222 aa8.5□□□□□ -1.05
UBR3-211ENST00000487689 USP17L5A8MUK1 530 aa8.49□□□□□ -1.05
UBR3-211ENST00000487689 SFSWAPQ12872 951 aaKnown RBP8.49□□□□□ -1.05
UBR3-211ENST00000487689 TP53INP1Q96A56 240 aa8.49□□□□□ -1.05
UBR3-211ENST00000487689 POM121Q96HA1 1249 aa8.49□□□□□ -1.05
UBR3-211ENST00000487689 C20orf204Q6ZNR8 217 aa8.48□□□□□ -1.05
UBR3-211ENST00000487689 ZNF232Q9UNY5 417 aa8.48□□□□□ -1.05
UBR3-211ENST00000487689 PCDHGA11Q9Y5H2 935 aa8.48□□□□□ -1.05
UBR3-211ENST00000487689 ELNP15502 786 aa8.47□□□□□ -1.05
UBR3-211ENST00000487689 SHISA2Q6UWI4 295 aa8.47□□□□□ -1.05
UBR3-211ENST00000487689 RAB44Q7Z6P3 723 aaPredicted RBP8.47□□□□□ -1.05
UBR3-211ENST00000487689 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
UBR3-211ENST00000487689 A0A0A0MRY4 1105 aa8.46□□□□□ -1.06
UBR3-211ENST00000487689 SPEM2Q0P670 501 aa8.46□□□□□ -1.06
UBR3-211ENST00000487689 MCTP1Q6DN14 999 aa8.46□□□□□ -1.06
UBR3-211ENST00000487689 ZDHHC1Q8WTX9 485 aa8.46□□□□□ -1.06
UBR3-211ENST00000487689 LENG1Q96BZ8 264 aaPredicted RBP8.46□□□□□ -1.06
UBR3-211ENST00000487689 LILRB5O75023 590 aa8.45□□□□□ -1.06
UBR3-211ENST00000487689 NRG1Q02297 640 aaPredicted RBP8.45□□□□□ -1.06
UBR3-211ENST00000487689 HDGFL1Q5TGJ6 251 aa8.45□□□□□ -1.06
UBR3-211ENST00000487689 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
UBR3-211ENST00000487689 ZNF358Q9NW07 568 aa8.45□□□□□ -1.06
UBR3-211ENST00000487689 RAC1P63000 192 aa8.44□□□□□ -1.06
UBR3-211ENST00000487689 NEUROD1Q13562 356 aa8.44□□□□□ -1.06
UBR3-211ENST00000487689 L3MBTL2Q969R5 705 aa8.44□□□□□ -1.06
UBR3-211ENST00000487689 SCHIP1Q9P0W5 487 aaPredicted RBP8.44□□□□□ -1.06
UBR3-211ENST00000487689 USP17L3A6NCW0 530 aa8.43□□□□□ -1.06
UBR3-211ENST00000487689 USP17L4A6NCW7 530 aa8.43□□□□□ -1.06
UBR3-211ENST00000487689 EML1O00423 815 aa8.43□□□□□ -1.06
UBR3-211ENST00000487689 TMEM132AQ24JP5 1023 aa8.43□□□□□ -1.06
UBR3-211ENST00000487689 USP17L2Q6R6M4 530 aa8.43□□□□□ -1.06
UBR3-211ENST00000487689 USP17L1Q7RTZ2 530 aa8.43□□□□□ -1.06
UBR3-211ENST00000487689 PLEKHM2Q8IWE5 1019 aa8.43□□□□□ -1.06
UBR3-211ENST00000487689 TPCN2Q8NHX9 752 aa8.43□□□□□ -1.06
UBR3-211ENST00000487689 ATP9BO43861 1147 aa8.42□□□□□ -1.06
UBR3-211ENST00000487689 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
UBR3-211ENST00000487689 SSBP4Q9BWG4 385 aaPredicted RBP8.42□□□□□ -1.06
UBR3-211ENST00000487689 USP21Q9UK80 565 aa8.42□□□□□ -1.06
UBR3-211ENST00000487689 SERTM1A2A2V5 107 aa8.41□□□□□ -1.06
UBR3-211ENST00000487689 PALM3A6NDB9 673 aaPredicted RBP8.41□□□□□ -1.06
UBR3-211ENST00000487689 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
UBR3-211ENST00000487689 NOS2P35228 1153 aa8.41□□□□□ -1.06
UBR3-211ENST00000487689 TEAD4Q15561 434 aa8.41□□□□□ -1.06
UBR3-211ENST00000487689 SLC9A9Q8IVB4 645 aa8.41□□□□□ -1.06
UBR3-211ENST00000487689 C7orf43Q8WVR3 580 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms