RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ZC3H13Q5T200 1668 aaKnown RBP14.01□□□□□ -0.17
TRA2B-214ENST00000487615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.01□□□□□ -0.17
TRA2B-214ENST00000487615 RASSF8Q8NHQ8 419 aa14.01□□□□□ -0.17
TRA2B-214ENST00000487615 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
TRA2B-214ENST00000487615 JARID2Q92833 1246 aaPredicted RBP14.01□□□□□ -0.17
TRA2B-214ENST00000487615 DCAF5Q96JK2 942 aa14.01□□□□□ -0.17
TRA2B-214ENST00000487615 SDF4Q9BRK5 362 aa14.01□□□□□ -0.17
TRA2B-214ENST00000487615 EIF4A1P60842 406 aaKnown RBP14.01□□□□□ -0.17
TRA2B-214ENST00000487615 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
TRA2B-214ENST00000487615 PIK3C2BO00750 1634 aa14.01□□□□□ -0.17
TRA2B-214ENST00000487615 SART3Q15020 963 aaKnown RBP14□□□□□ -0.17
TRA2B-214ENST00000487615 METTL24Q5JXM2 366 aa14□□□□□ -0.17
TRA2B-214ENST00000487615 LARP6Q9BRS8 491 aaKnown RBP14□□□□□ -0.17
TRA2B-214ENST00000487615 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
TRA2B-214ENST00000487615 ESPNB1AK53 854 aa14□□□□□ -0.17
TRA2B-214ENST00000487615 KINO60870 393 aaKnown RBP14□□□□□ -0.17
TRA2B-214ENST00000487615 IFIT5Q13325 482 aaKnown RBP14□□□□□ -0.17
TRA2B-214ENST00000487615 FERMT3Q86UX7 667 aa14□□□□□ -0.17
TRA2B-214ENST00000487615 NOL10Q9BSC4 688 aaKnown RBP14□□□□□ -0.17
TRA2B-214ENST00000487615 CCDC192P0DO97 292 aa14□□□□□ -0.17
TRA2B-214ENST00000487615 CEBPZQ03701 1054 aaKnown RBP14□□□□□ -0.17
TRA2B-214ENST00000487615 AMOTL1Q8IY63 956 aa13.99□□□□□ -0.17
TRA2B-214ENST00000487615 SPATA32Q96LK8 384 aa13.99□□□□□ -0.17
TRA2B-214ENST00000487615 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
TRA2B-214ENST00000487615 ZNF790Q6PG37 636 aa13.99□□□□□ -0.17
TRA2B-214ENST00000487615 GSPT1P15170 499 aaKnown RBP13.99□□□□□ -0.17
TRA2B-214ENST00000487615 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 LRRC7Q96NW7 1537 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 PTCH1Q13635 1447 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 MROH2AA6NES4 1674 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
TRA2B-214ENST00000487615 G3V3G9 751 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 STX6O43752 255 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 NBPF7P0C2Y1 421 aaPredicted RBP13.98□□□□□ -0.17
TRA2B-214ENST00000487615 IMMTQ16891 758 aaKnown RBP13.98□□□□□ -0.17
TRA2B-214ENST00000487615 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 TNMDQ9H2S6 317 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 CFAP45Q9UL16 551 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 USP44Q9H0E7 712 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 HMG20BQ9P0W2 317 aa13.98□□□□□ -0.17
TRA2B-214ENST00000487615 AOX1Q06278 1338 aa13.97□□□□□ -0.17
TRA2B-214ENST00000487615 IDH1O75874 414 aaKnown RBP13.97□□□□□ -0.17
TRA2B-214ENST00000487615 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
TRA2B-214ENST00000487615 STK38Q15208 465 aa13.97□□□□□ -0.17
TRA2B-214ENST00000487615 DDX11Q96FC9 970 aa13.97□□□□□ -0.17
TRA2B-214ENST00000487615 HOOK1Q9UJC3 728 aaKnown RBP13.97□□□□□ -0.17
TRA2B-214ENST00000487615 CLTCQ00610 1675 aaKnown RBP13.97□□□□□ -0.17
TRA2B-214ENST00000487615 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
TRA2B-214ENST00000487615 AGLP35573 1532 aa13.97□□□□□ -0.17
TRA2B-214ENST00000487615 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
TRA2B-214ENST00000487615 NUTM2BA6NNL0 878 aaPredicted RBP13.97□□□□□ -0.17
TRA2B-214ENST00000487615 NUTM2EB1AL46 878 aaPredicted RBP13.97□□□□□ -0.17
TRA2B-214ENST00000487615 GOLIM4O00461 696 aa13.97□□□□□ -0.17
TRA2B-214ENST00000487615 NUTM2AQ8IVF1 878 aaPredicted RBP13.97□□□□□ -0.17
TRA2B-214ENST00000487615 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.17
TRA2B-214ENST00000487615 FBXW7Q969H0 707 aa13.96□□□□□ -0.17
TRA2B-214ENST00000487615 NACAP1Q9BZK3 213 aa13.96□□□□□ -0.17
TRA2B-214ENST00000487615 GDPD2Q9HCC8 539 aa13.96□□□□□ -0.17
TRA2B-214ENST00000487615 GNL3LQ9NVN8 582 aaKnown RBP13.96□□□□□ -0.17
TRA2B-214ENST00000487615 RBM8AQ9Y5S9 174 aaKnown RBP13.96□□□□□ -0.17
TRA2B-214ENST00000487615 RRP12Q5JTH9 1297 aaKnown RBP13.96□□□□□ -0.17
TRA2B-214ENST00000487615 ZGPATQ8N5A5 531 aaKnown RBP13.96□□□□□ -0.17
TRA2B-214ENST00000487615 NAT10Q9H0A0 1025 aaKnown RBP13.96□□□□□ -0.17
TRA2B-214ENST00000487615 BICC1Q9H694 974 aaKnown RBP13.96□□□□□ -0.17
TRA2B-214ENST00000487615 PPLO60437 1756 aa13.96□□□□□ -0.17
TRA2B-214ENST00000487615 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.17
TRA2B-214ENST00000487615 GJB2P29033 226 aa13.96□□□□□ -0.17
TRA2B-214ENST00000487615 NUP62CLQ9H1M0 184 aa13.96□□□□□ -0.17
TRA2B-214ENST00000487615 TRIM5Q9C035 493 aa13.96□□□□□ -0.18
TRA2B-214ENST00000487615 TPM3P06753 285 aa13.95□□□□□ -0.18
TRA2B-214ENST00000487615 ME1P48163 572 aa13.95□□□□□ -0.18
TRA2B-214ENST00000487615 SCAND2PQ9GZW5 306 aaPredicted RBP13.95□□□□□ -0.18
TRA2B-214ENST00000487615 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
TRA2B-214ENST00000487615 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
TRA2B-214ENST00000487615 EXOC5O00471 708 aa13.95□□□□□ -0.18
TRA2B-214ENST00000487615 SIRT2Q8IXJ6 389 aa13.95□□□□□ -0.18
TRA2B-214ENST00000487615 GPTP24298 496 aa13.95□□□□□ -0.18
TRA2B-214ENST00000487615 HSP90AA2PQ14568 343 aaPredicted RBP13.95□□□□□ -0.18
TRA2B-214ENST00000487615 CCDC183Q5T5S1 534 aa13.95□□□□□ -0.18
TRA2B-214ENST00000487615 DDX46Q7L014 1031 aaKnown RBP13.95□□□□□ -0.18
TRA2B-214ENST00000487615 KAT6BQ8WYB5 2073 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 IL2RBP14784 551 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 SSH3Q8TE77 659 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 INTS4Q96HW7 963 aaKnown RBP13.94□□□□□ -0.18
TRA2B-214ENST00000487615 ARID3AQ99856 593 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 XRCC6P12956 609 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRA2B-214ENST00000487615 XBP1P17861 261 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 HSPA2P54652 639 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 IQSEC2Q5JU85 1478 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 PREX1Q8TCU6 1659 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 SLC52A2Q9HAB3 445 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 ANKRD18BA2A2Z9 1011 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 KCNQ3O43525 872 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 IGHMBP2P38935 993 aaKnown RBP13.94□□□□□ -0.18
TRA2B-214ENST00000487615 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
TRA2B-214ENST00000487615 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
TRA2B-214ENST00000487615 ANKARQ7Z5J8 1434 aa13.93□□□□□ -0.18
TRA2B-214ENST00000487615 KDM4AO75164 1064 aa13.93□□□□□ -0.18
TRA2B-214ENST00000487615 NMIQ13287 307 aaPredicted RBP13.93□□□□□ -0.18
TRA2B-214ENST00000487615 LDHAL6AQ6ZMR3 332 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms