RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	ARHGEF10	O15013	1369 aa		10.38	□□□□□ -0.75
GARNL3-218	ENST00000487565	PARD3	Q8TEW0	1356 aa		10.38	□□□□□ -0.75
GARNL3-218	ENST00000487565	USP54	Q70EL1	1684 aa		10.38	□□□□□ -0.75
GARNL3-218	ENST00000487565	SPTLC1	O15269	473 aa		10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	PRR20E	P86478	221 aa		10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	PRR20C	P86479	221 aa		10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	PRR20D	P86480	221 aa		10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	PRR20B	P86481	221 aa		10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	PRR20A	P86496	221 aa		10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	MED1	Q15648	1581 aa	Predicted RBP	10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	DDX17	Q92841	729 aa	Known RBP	10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	GGNBP2	Q9H3C7	697 aa		10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	ALS2	Q96Q42	1657 aa		10.37	□□□□□ -0.75
GARNL3-218	ENST00000487565	PHLPP1	O60346	1717 aa		10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	SPDYE5	A6NIY4	337 aa		10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	GDF9	O60383	454 aa		10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	MORC1	Q86VD1	984 aa		10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	PRR7	Q8TB68	274 aa		10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	COG3	Q96JB2	828 aa		10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	PCDHB15	Q9Y5E8	787 aa		10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	USP31	Q70CQ4	1352 aa		10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	COL16A1	Q07092	1604 aa	Predicted RBP	10.36	□□□□□ -0.75
GARNL3-218	ENST00000487565	SOS2	Q07890	1332 aa	Predicted RBP	10.35	□□□□□ -0.75
GARNL3-218	ENST00000487565	FYB1	O15117	783 aa		10.35	□□□□□ -0.75
GARNL3-218	ENST00000487565	TRIM32	Q13049	653 aa		10.35	□□□□□ -0.75
GARNL3-218	ENST00000487565	RALBP1	Q15311	655 aa		10.35	□□□□□ -0.75
GARNL3-218	ENST00000487565	CSPP1	Q1MSJ5	1256 aa		10.35	□□□□□ -0.75
GARNL3-218	ENST00000487565	MYSM1	Q5VVJ2	828 aa		10.35	□□□□□ -0.75
GARNL3-218	ENST00000487565	NUDT12	Q9BQG2	462 aa		10.35	□□□□□ -0.75
GARNL3-218	ENST00000487565	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.35	□□□□□ -0.75
GARNL3-218	ENST00000487565	SPATA31A3	Q5VYP0	1347 aa		10.34	□□□□□ -0.75
GARNL3-218	ENST00000487565	SLIT3	O75094	1523 aa		10.34	□□□□□ -0.75
GARNL3-218	ENST00000487565	ABTB2	Q8N961	1025 aa		10.34	□□□□□ -0.75
GARNL3-218	ENST00000487565	ZBTB3	Q9H5J0	574 aa		10.34	□□□□□ -0.75
GARNL3-218	ENST00000487565	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.34	□□□□□ -0.75
GARNL3-218	ENST00000487565	PKD2L1	Q9P0L9	805 aa		10.34	□□□□□ -0.75
GARNL3-218	ENST00000487565	USP19	O94966	1318 aa		10.33	□□□□□ -0.76
GARNL3-218	ENST00000487565	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.33	□□□□□ -0.76
GARNL3-218	ENST00000487565	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.33	□□□□□ -0.76
GARNL3-218	ENST00000487565	NUTM2G	Q5VZR2	741 aa		10.33	□□□□□ -0.76
GARNL3-218	ENST00000487565	TRAF7	Q6Q0C0	670 aa		10.33	□□□□□ -0.76
GARNL3-218	ENST00000487565	KDM4C	Q9H3R0	1056 aa		10.33	□□□□□ -0.76
GARNL3-218	ENST00000487565	MARF1	Q9Y4F3	1742 aa	Known RBP	10.33	□□□□□ -0.76
GARNL3-218	ENST00000487565	TNNT2	P45379	298 aa	Predicted RBP	10.32	□□□□□ -0.76
GARNL3-218	ENST00000487565	NLRP13	Q86W25	1043 aa		10.32	□□□□□ -0.76
GARNL3-218	ENST00000487565	CABLES1	Q8TDN4	633 aa		10.32	□□□□□ -0.76
GARNL3-218	ENST00000487565	LIMD1	Q9UGP4	676 aa		10.32	□□□□□ -0.76
GARNL3-218	ENST00000487565	NFAT5	O94916	1531 aa		10.32	□□□□□ -0.76
GARNL3-218	ENST00000487565	AATK	Q6ZMQ8	1374 aa		10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	PNPLA6	Q8IY17	1366 aa		10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	ABCA3	Q99758	1704 aa		10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	CCNYL3	P0C7X3	344 aa		10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	PTPRN	Q16849	979 aa		10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	PKDCC	Q504Y2	493 aa		10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	PRPF38B	Q5VTL8	546 aa	Known RBP	10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	RSPH6A	Q9H0K4	717 aa		10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	SMG6	Q86US8	1419 aa	Known RBP	10.31	□□□□□ -0.76
GARNL3-218	ENST00000487565	CRYBG1	Q9Y4K1	1723 aa		10.3	□□□□□ -0.76
GARNL3-218	ENST00000487565	FAM187A	A6NFU0	413 aa		10.3	□□□□□ -0.76
GARNL3-218	ENST00000487565	PPP2R1A	P30153	589 aa		10.3	□□□□□ -0.76
GARNL3-218	ENST00000487565	DESI1	Q6ICB0	168 aa		10.3	□□□□□ -0.76
GARNL3-218	ENST00000487565	LRRC59	Q96AG4	307 aa	Known RBP	10.3	□□□□□ -0.76
GARNL3-218	ENST00000487565	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.3	□□□□□ -0.76
GARNL3-218	ENST00000487565	SHPRH	Q149N8	1683 aa		10.29	□□□□□ -0.76
GARNL3-218	ENST00000487565	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.29	□□□□□ -0.76
GARNL3-218	ENST00000487565	NUTM2E	B1AL46	878 aa	Predicted RBP	10.29	□□□□□ -0.76
GARNL3-218	ENST00000487565	LCE2B	O14633	110 aa		10.29	□□□□□ -0.76
GARNL3-218	ENST00000487565	CLK2	P49760	499 aa	Known RBP	10.29	□□□□□ -0.76
GARNL3-218	ENST00000487565	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.29	□□□□□ -0.76
GARNL3-218	ENST00000487565	KCNH5	Q8NCM2	988 aa		10.29	□□□□□ -0.76
GARNL3-218	ENST00000487565	POLR3E	Q9NVU0	708 aa		10.29	□□□□□ -0.76
GARNL3-218	ENST00000487565	RTL1	A6NKG5	1358 aa		10.28	□□□□□ -0.76
GARNL3-218	ENST00000487565	JCAD	Q9P266	1359 aa		10.28	□□□□□ -0.76
GARNL3-218	ENST00000487565	CFAP99	D6REC4	459 aa		10.28	□□□□□ -0.76
GARNL3-218	ENST00000487565	DGAT1	O75907	488 aa		10.28	□□□□□ -0.76
GARNL3-218	ENST00000487565	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.28	□□□□□ -0.76
GARNL3-218	ENST00000487565	CYP4X1	Q8N118	509 aa		10.28	□□□□□ -0.76
GARNL3-218	ENST00000487565	ABCC6	O95255	1503 aa		10.28	□□□□□ -0.76
GARNL3-218	ENST00000487565	CCER2	I3L3R5	266 aa		10.27	□□□□□ -0.77
GARNL3-218	ENST00000487565	WNT7A	O00755	349 aa		10.27	□□□□□ -0.77
GARNL3-218	ENST00000487565	QPCT	Q16769	361 aa		10.27	□□□□□ -0.77
GARNL3-218	ENST00000487565	TUSC1	Q2TAM9	212 aa		10.27	□□□□□ -0.77
GARNL3-218	ENST00000487565	DDRGK1	Q96HY6	314 aa		10.27	□□□□□ -0.77
GARNL3-218	ENST00000487565	CFAP53	Q96M91	514 aa		10.27	□□□□□ -0.77
GARNL3-218	ENST00000487565	FAM117A	Q9C073	453 aa		10.27	□□□□□ -0.77
GARNL3-218	ENST00000487565	FLT4	P35916	1363 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	KIF24	Q5T7B8	1368 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	ZBTB7C	A1YPR0	619 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	GC	P02774	474 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	WNT7B	P56706	349 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	RRS1	Q15050	365 aa	Known RBP	10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	TSC1	Q92574	1164 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	MRS2	Q9HD23	443 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	EVA1B	Q9NVM1	165 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	EMILIN1	Q9Y6C2	1016 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	PEAK1	Q9H792	1746 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	MAP3K19	Q56UN5	1328 aa		10.26	□□□□□ -0.77
GARNL3-218	ENST00000487565	COL3A1	P02461	1466 aa	Predicted RBP	10.25	□□□□□ -0.77
GARNL3-218	ENST00000487565	TTC24	A2A3L6	582 aa	Predicted RBP	10.25	□□□□□ -0.77

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