RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 ZNF853P0CG23 659 aa20.22■□□□□ 0.83
TRAK1-209ENST00000487159 GCKP35557 465 aa20.22■□□□□ 0.83
TRAK1-209ENST00000487159 MAP3K9P80192 1104 aa20.22■□□□□ 0.83
TRAK1-209ENST00000487159 HDXQ7Z353 690 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 STMN2Q93045 179 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 PPP2R1AP30153 589 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 MTHFSP49914 203 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 CCDC77Q9BR77 488 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 GRIPAP1Q4V328 841 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 CCDC18Q5T9S5 1454 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 GOLIM4O00461 696 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 GIMAP6Q6P9H5 292 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 DZIP1Q86YF9 867 aaKnown RBP20.21■□□□□ 0.83
TRAK1-209ENST00000487159 MRVI1Q9Y6F6 885 aa20.21■□□□□ 0.83
TRAK1-209ENST00000487159 DCAF8L1A6NGE4 600 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 ATP6V1AP38606 617 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 PSME1Q06323 249 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 GBP7Q8N8V2 638 aaPredicted RBP20.2■□□□□ 0.82
TRAK1-209ENST00000487159 C8orf76Q96K31 380 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 CTAGE9A4FU28 777 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 ATF3P18847 181 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 IFI16Q16666 785 aaKnown RBP20.2■□□□□ 0.82
TRAK1-209ENST00000487159 IFT74Q96LB3 600 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 LIMCH1Q9UPQ0 1083 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
TRAK1-209ENST00000487159 CTCFLQ8NI51 663 aaPredicted RBP20.2■□□□□ 0.82
TRAK1-209ENST00000487159 MYO1BO43795 1136 aa20.19■□□□□ 0.82
TRAK1-209ENST00000487159 ZSCAN25Q6NSZ9 544 aa20.19■□□□□ 0.82
TRAK1-209ENST00000487159 AACSQ86V21 672 aa20.19■□□□□ 0.82
TRAK1-209ENST00000487159 RAB3IL1Q8TBN0 382 aa20.19■□□□□ 0.82
TRAK1-209ENST00000487159 FAM200AQ8TCP9 573 aa20.19■□□□□ 0.82
TRAK1-209ENST00000487159 VGFO15240 615 aaPredicted RBP20.19■□□□□ 0.82
TRAK1-209ENST00000487159 TSNARE1Q96NA8 513 aa20.19■□□□□ 0.82
TRAK1-209ENST00000487159 PHAXQ9H814 394 aaKnown RBP20.19■□□□□ 0.82
TRAK1-209ENST00000487159 UBASH3AP57075 661 aa20.19■□□□□ 0.82
TRAK1-209ENST00000487159 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
TRAK1-209ENST00000487159 SREK1Q8WXA9 508 aaKnown RBP20.19■□□□□ 0.82
TRAK1-209ENST00000487159 VCXQ9H320 206 aa20.19■□□□□ 0.82
TRAK1-209ENST00000487159 STX6O43752 255 aa20.18■□□□□ 0.82
TRAK1-209ENST00000487159 AKR1B10O60218 316 aa20.18■□□□□ 0.82
TRAK1-209ENST00000487159 WHAMMP3Q1A5X7 153 aa20.18■□□□□ 0.82
TRAK1-209ENST00000487159 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
TRAK1-209ENST00000487159 TFIP11Q9UBB9 837 aaKnown RBP20.18■□□□□ 0.82
TRAK1-209ENST00000487159 TPD52P55327 224 aaPredicted RBP20.18■□□□□ 0.82
TRAK1-209ENST00000487159 TSNAXIP1Q2TAA8 658 aa20.18■□□□□ 0.82
TRAK1-209ENST00000487159 CCDC110Q8TBZ0 833 aa20.18■□□□□ 0.82
TRAK1-209ENST00000487159 FAM177BA6PVY3 158 aa20.17■□□□□ 0.82
TRAK1-209ENST00000487159 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
TRAK1-209ENST00000487159 AFAP1L1Q8TED9 768 aa20.17■□□□□ 0.82
TRAK1-209ENST00000487159 VCX3BQ9H321 246 aa20.17■□□□□ 0.82
TRAK1-209ENST00000487159 GGNBP2Q9H3C7 697 aa20.17■□□□□ 0.82
TRAK1-209ENST00000487159 NDUFAB1O14561 156 aa20.17■□□□□ 0.82
TRAK1-209ENST00000487159 PDE1CQ14123 709 aaPredicted RBP20.17■□□□□ 0.82
TRAK1-209ENST00000487159 CFAP58Q5T655 872 aa20.17■□□□□ 0.82
TRAK1-209ENST00000487159 RPAINQ86UA6 219 aa20.17■□□□□ 0.82
TRAK1-209ENST00000487159 CASQ2O14958 399 aaPredicted RBP20.17■□□□□ 0.82
TRAK1-209ENST00000487159 CYLC1P35663 651 aaPredicted RBP20.17■□□□□ 0.82
TRAK1-209ENST00000487159 ATP2B2Q01814 1243 aa20.16■□□□□ 0.82
TRAK1-209ENST00000487159 IL1RAPL2Q9NP60 686 aa20.16■□□□□ 0.82
TRAK1-209ENST00000487159 SKAP1Q86WV1 359 aa20.16■□□□□ 0.82
TRAK1-209ENST00000487159 RASAL2Q9UJF2 1139 aa20.16■□□□□ 0.82
TRAK1-209ENST00000487159 GUCY1B3Q02153 619 aa20.16■□□□□ 0.82
TRAK1-209ENST00000487159 TRIM7Q9C029 511 aa20.16■□□□□ 0.82
TRAK1-209ENST00000487159 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
TRAK1-209ENST00000487159 N4BP3O15049 544 aa20.15■□□□□ 0.82
TRAK1-209ENST00000487159 ZBTB9Q96C00 473 aa20.15■□□□□ 0.82
TRAK1-209ENST00000487159 ERO1AQ96HE7 468 aa20.15■□□□□ 0.82
TRAK1-209ENST00000487159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.15■□□□□ 0.823e-7■■□□□ 13.2
TRAK1-209ENST00000487159 FAM160A1Q05DH4 1040 aa20.15■□□□□ 0.82
TRAK1-209ENST00000487159 CCDC38Q502W7 563 aa20.15■□□□□ 0.82
TRAK1-209ENST00000487159 ANO6Q4KMQ2 910 aa20.15■□□□□ 0.82
TRAK1-209ENST00000487159 GBP1P32455 592 aa20.14■□□□□ 0.82
TRAK1-209ENST00000487159 TMEM57Q8N5G2 664 aa20.14■□□□□ 0.82
TRAK1-209ENST00000487159 SELENOOQ9BVL4 669 aa20.14■□□□□ 0.82
TRAK1-209ENST00000487159 RHOXF2BP0C7M4 288 aa20.14■□□□□ 0.81
TRAK1-209ENST00000487159 PRKAR2BP31323 418 aa20.14■□□□□ 0.81
TRAK1-209ENST00000487159 RHOXF2Q9BQY4 288 aa20.14■□□□□ 0.81
TRAK1-209ENST00000487159 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
TRAK1-209ENST00000487159 ARHGAP25P42331 645 aa20.14■□□□□ 0.81
TRAK1-209ENST00000487159 PSMC4P43686 418 aa20.14■□□□□ 0.81
TRAK1-209ENST00000487159 INTS8Q75QN2 995 aaKnown RBP20.14■□□□□ 0.81
TRAK1-209ENST00000487159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.14■□□□□ 0.81
TRAK1-209ENST00000487159 COMMD10Q9Y6G5 202 aa20.14■□□□□ 0.81
TRAK1-209ENST00000487159 SEPT14Q6ZU15 432 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 RABGAP1Q9Y3P9 1069 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 RAB11FIP3O75154 756 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 VAV2P52735 878 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 NEDD9Q14511 834 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 RRAGDQ9NQL2 400 aaPredicted RBP20.13■□□□□ 0.81
TRAK1-209ENST00000487159 GNL3LQ9NVN8 582 aaKnown RBP20.13■□□□□ 0.81
TRAK1-209ENST00000487159 SYT10Q6XYQ8 523 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 SRGAP3O43295 1099 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 CIB2O75838 187 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 SYT1P21579 422 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 MAP7D1Q3KQU3 841 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 MICAL1Q8TDZ2 1067 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 CNNM1Q9NRU3 951 aa20.13■□□□□ 0.81
TRAK1-209ENST00000487159 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRAK1-209ENST00000487159 PUF60Q9UHX1 559 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms