RNA–Protein interactions for RNA: ENST00000486757.1

CTSE-204, Transcript of cathepsin E, humanhuman

TSL 5

Gene CTSE, Length 435 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-204ENST00000486757 MSH6P52701 1360 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 CLTCQ00610 1675 aaKnown RBP9.14□□□□□ -0.95
CTSE-204ENST00000486757 CCDC196A0A1B0GTZ2 297 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 ERICH4A6NGS2 130 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 NRDCO43847 1150 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 SMARCA5O60264 1052 aaPredicted RBP9.14□□□□□ -0.95
CTSE-204ENST00000486757 PDCP20941 246 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 SYT1P21579 422 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 PDE1AP54750 535 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 CCZ1BP86790 482 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 CCZ1P86791 482 aaPredicted RBP9.14□□□□□ -0.95
CTSE-204ENST00000486757 TTC31Q49AM3 519 aaPredicted RBP9.14□□□□□ -0.95
CTSE-204ENST00000486757 GPR161Q8N6U8 529 aaKnown RBP9.14□□□□□ -0.95
CTSE-204ENST00000486757 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
CTSE-204ENST00000486757 DEF6Q9H4E7 631 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 CBX8Q9HC52 389 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 ORC3Q9UBD5 711 aaPredicted RBP9.14□□□□□ -0.95
CTSE-204ENST00000486757 CLIP2Q9UDT6 1046 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 LIMCH1Q9UPQ0 1083 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTSE-204ENST00000486757 LRRFIP2Q9Y608 721 aaKnown RBP9.14□□□□□ -0.95
CTSE-204ENST00000486757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTSE-204ENST00000486757 LRRC7Q96NW7 1537 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 CRYBG1Q9Y4K1 1723 aa9.14□□□□□ -0.95
CTSE-204ENST00000486757 SGSM2O43147 1006 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 CORO7P57737 925 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 KRT85P78386 507 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 SATB1Q01826 763 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 GIMAP6Q6P9H5 292 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 KRBA2Q6ZNG9 492 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 EFCAB13Q8IY85 973 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 STAG1Q8WVM7 1258 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 CARD10Q9BWT7 1032 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 TRIM5Q9C035 493 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 ALDH8A1Q9H2A2 487 aaPredicted RBP9.13□□□□□ -0.95
CTSE-204ENST00000486757 DNAI1Q9UI46 699 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 MTMR6Q9Y217 621 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 CNPY2Q9Y2B0 182 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 NEXMIFQ5QGS0 1516 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 CHD1O14646 1710 aa9.13□□□□□ -0.95
CTSE-204ENST00000486757 ZFYVE16Q7Z3T8 1539 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 TULP4Q9NRJ4 1543 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 GOLGA6L9A6NEM1 432 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 POTEB2H3BUK9 544 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 MAP2K7O14733 419 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 MYO1BO43795 1136 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 TADA3O75528 432 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 SKILP12757 684 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 CHMLP26374 656 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 USP8P40818 1118 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 PSME1Q06323 249 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 LRMPQ12912 555 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 TUBB2AQ13885 445 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 IQCB1Q15051 598 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 BRD3Q15059 726 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 LRRFIP1Q32MZ4 808 aaKnown RBP9.12□□□□□ -0.95
CTSE-204ENST00000486757 MCTP2Q6DN12 878 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 MMS22LQ6ZRQ5 1243 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 REXO1L1PQ8IX06 675 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 SPC24Q8NBT2 197 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 CCDC191Q8NCU4 936 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 BPIFA3Q9BQP9 254 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 TUBB2BQ9BVA1 445 aa9.12□□□□□ -0.95
CTSE-204ENST00000486757 C14orf93Q9H972 538 aaKnown RBP9.12□□□□□ -0.95
CTSE-204ENST00000486757 EVC2Q86UK5 1308 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 CCDC151A5D8V7 595 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 KIF3CO14782 793 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 U2SURPO15042 1029 aaKnown RBP9.11□□□□□ -0.95
CTSE-204ENST00000486757 TBC1D8O95759 1140 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 ZNF165P49910 485 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 ETF1P62495 437 aaKnown RBP9.11□□□□□ -0.95
CTSE-204ENST00000486757 SNW1Q13573 536 aaKnown RBP9.11□□□□□ -0.95
CTSE-204ENST00000486757 SMC1AQ14683 1233 aaKnown RBP9.11□□□□□ -0.95
CTSE-204ENST00000486757 NAA30Q147X3 362 aaPredicted RBP9.11□□□□□ -0.95
CTSE-204ENST00000486757 NFE2L2Q16236 605 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 VPS53Q5VIR6 699 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 ATL3Q6DD88 541 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 UBXN4Q92575 508 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 MPHOSPH8Q99549 860 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 RBM28Q9NW13 759 aaKnown RBP9.11□□□□□ -0.95
CTSE-204ENST00000486757 SMC3Q9UQE7 1217 aa9.11□□□□□ -0.95
CTSE-204ENST00000486757 SOS1Q07889 1333 aaPredicted RBP9.1□□□□□ -0.95
CTSE-204ENST00000486757 ATXN2Q99700 1313 aaKnown RBP9.1□□□□□ -0.95
CTSE-204ENST00000486757 PPLO60437 1756 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 N4BP2Q86UW6 1770 aaPredicted RBP9.1□□□□□ -0.95
CTSE-204ENST00000486757 C21orf2O43822 256 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 DIAPH1O60610 1272 aaKnown RBP9.1□□□□□ -0.95
CTSE-204ENST00000486757 CASTP20810 708 aaKnown RBP9.1□□□□□ -0.95
CTSE-204ENST00000486757 CALRP27797 417 aaKnown RBP9.1□□□□□ -0.95
CTSE-204ENST00000486757 USP5P45974 858 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 ARHGAP29Q52LW3 1261 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 CC2D1AQ6P1N0 951 aaPredicted RBP9.1□□□□□ -0.95
CTSE-204ENST00000486757 LEKR1Q6ZMV7 388 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.1□□□□□ -0.95
CTSE-204ENST00000486757 RABGGTAQ92696 567 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 SMARCE1Q969G3 411 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 DDX11Q96FC9 970 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 TNMDQ9H2S6 317 aa9.1□□□□□ -0.95
CTSE-204ENST00000486757 ZSCAN16Q9H4T2 348 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms