RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 ANKRD20A12PQ8NF67 263 aa16.02■□□□□ 0.16
PKD1-219ENST00000486339 ZNF396Q96N95 335 aaPredicted RBP16.02■□□□□ 0.16
PKD1-219ENST00000486339 NIP7Q9Y221 180 aaKnown RBP eCLIP16.02■□□□□ 0.16
PKD1-219ENST00000486339 SHROOM2Q13796 1616 aa16.02■□□□□ 0.16
PKD1-219ENST00000486339 C6orf229H3BNL8 230 aa16.02■□□□□ 0.15
PKD1-219ENST00000486339 TPM1P09493 284 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
PKD1-219ENST00000486339 SETDB2Q96T68 719 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 MINDY4BA8MYZ0 360 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 TPM3P06753 285 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 HOXB7P09629 217 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
PKD1-219ENST00000486339 CDKL5O76039 1030 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 KINO60870 393 aaKnown RBP16.01■□□□□ 0.15
PKD1-219ENST00000486339 G2E3Q7L622 706 aa16.01■□□□□ 0.15
PKD1-219ENST00000486339 CAVIN1Q6NZI2 390 aaKnown RBP16■□□□□ 0.15
PKD1-219ENST00000486339 USP5P45974 858 aa16■□□□□ 0.15
PKD1-219ENST00000486339 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
PKD1-219ENST00000486339 IQGAP3Q86VI3 1631 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 PDE1AP54750 535 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 KRT85P78386 507 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 JMYQ8N9B5 988 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 INSRP06213 1382 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 CEP85Q6P2H3 762 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 KDM5CP41229 1560 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 IL15P40933 162 aaPredicted RBP15.99■□□□□ 0.15
PKD1-219ENST00000486339 SLC52A2Q9HAB3 445 aa15.99■□□□□ 0.15
PKD1-219ENST00000486339 PA2G4Q9UQ80 394 aaKnown RBP15.99■□□□□ 0.15
PKD1-219ENST00000486339 PRR36Q9H6K5 1346 aa15.98■□□□□ 0.15
PKD1-219ENST00000486339 TTF1Q15361 905 aaPredicted RBP15.98■□□□□ 0.15
PKD1-219ENST00000486339 ATP2B3Q16720 1220 aa15.98■□□□□ 0.15
PKD1-219ENST00000486339 DCTPP1Q9H773 170 aa15.98■□□□□ 0.15
PKD1-219ENST00000486339 ANKRD18AQ8IVF6 992 aa15.98■□□□□ 0.15
PKD1-219ENST00000486339 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
PKD1-219ENST00000486339 FAM135BQ49AJ0 1406 aa15.98■□□□□ 0.15
PKD1-219ENST00000486339 ZNF287Q9HBT7 754 aa15.97■□□□□ 0.15
PKD1-219ENST00000486339 RTCBQ9Y3I0 505 aaKnown RBP15.97■□□□□ 0.15
PKD1-219ENST00000486339 POLR3DP05423 398 aaPredicted RBP15.97■□□□□ 0.15
PKD1-219ENST00000486339 SDSP20132 328 aa15.97■□□□□ 0.15
PKD1-219ENST00000486339 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
PKD1-219ENST00000486339 ZNF213O14771 459 aa15.97■□□□□ 0.15
PKD1-219ENST00000486339 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
PKD1-219ENST00000486339 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
PKD1-219ENST00000486339 ATP7BP35670 1465 aa15.97■□□□□ 0.15
PKD1-219ENST00000486339 UQCRFS1P1P0C7P4 283 aa15.96■□□□□ 0.15
PKD1-219ENST00000486339 ST5P78524 1137 aa15.96■□□□□ 0.15
PKD1-219ENST00000486339 CCDC83Q8IWF9 413 aa15.96■□□□□ 0.15
PKD1-219ENST00000486339 RNF214Q8ND24 703 aa15.96■□□□□ 0.15
PKD1-219ENST00000486339 ZMYM4Q5VZL5 1548 aa15.96■□□□□ 0.15
PKD1-219ENST00000486339 BLMP54132 1417 aaPredicted RBP15.96■□□□□ 0.15
PKD1-219ENST00000486339 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.14
PKD1-219ENST00000486339 SOGA3Q5TF21 947 aa15.96■□□□□ 0.14
PKD1-219ENST00000486339 MKNK2Q9HBH9 465 aa15.96■□□□□ 0.14
PKD1-219ENST00000486339 AATKQ6ZMQ8 1374 aa15.96■□□□□ 0.14
PKD1-219ENST00000486339 TXLNAP40222 546 aa15.95■□□□□ 0.14
PKD1-219ENST00000486339 ME1P48163 572 aa15.95■□□□□ 0.14
PKD1-219ENST00000486339 PCMTD1Q96MG8 357 aaPredicted RBP15.95■□□□□ 0.14
PKD1-219ENST00000486339 PDIA4P13667 645 aaKnown RBP15.95■□□□□ 0.14
PKD1-219ENST00000486339 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
PKD1-219ENST00000486339 ZNF496Q96IT1 587 aaPredicted RBP15.95■□□□□ 0.14
PKD1-219ENST00000486339 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
PKD1-219ENST00000486339 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
PKD1-219ENST00000486339 CDC42BPBQ9Y5S2 1711 aa15.95■□□□□ 0.14
PKD1-219ENST00000486339 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
PKD1-219ENST00000486339 TPTE2Q6XPS3 522 aa15.95■□□□□ 0.14
PKD1-219ENST00000486339 USP6P35125 1406 aa15.95■□□□□ 0.14
PKD1-219ENST00000486339 IRS4O14654 1257 aaPredicted RBP15.94■□□□□ 0.14
PKD1-219ENST00000486339 PRIM1P49642 420 aaKnown RBP15.94■□□□□ 0.14
PKD1-219ENST00000486339 NAT10Q9H0A0 1025 aaKnown RBP15.94■□□□□ 0.14
PKD1-219ENST00000486339 FAM98CQ17RN3 349 aaKnown RBP15.94■□□□□ 0.14
PKD1-219ENST00000486339 C16orf71Q8IYS4 520 aaPredicted RBP15.94■□□□□ 0.14
PKD1-219ENST00000486339 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.14
PKD1-219ENST00000486339 SH2B1Q9NRF2 756 aaPredicted RBP15.94■□□□□ 0.14
PKD1-219ENST00000486339 OLFM4Q6UX06 510 aa15.94■□□□□ 0.14
PKD1-219ENST00000486339 SLF2Q8IX21 1173 aa15.94■□□□□ 0.14
PKD1-219ENST00000486339 RNF41Q9H4P4 317 aaPredicted RBP15.94■□□□□ 0.14
PKD1-219ENST00000486339 LDHCP07864 332 aa15.93■□□□□ 0.14
PKD1-219ENST00000486339 RANBP6O60518 1105 aaKnown RBP15.93■□□□□ 0.14
PKD1-219ENST00000486339 ARHGEF25Q86VW2 580 aa15.93■□□□□ 0.14
PKD1-219ENST00000486339 IQCA1Q86XH1 822 aa15.93■□□□□ 0.14
PKD1-219ENST00000486339 A1BGP04217 495 aa15.93■□□□□ 0.14
PKD1-219ENST00000486339 CRACR2BQ8N4Y2 399 aaPredicted RBP15.93■□□□□ 0.14
PKD1-219ENST00000486339 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
PKD1-219ENST00000486339 PLBD2Q8NHP8 589 aa15.93■□□□□ 0.14
PKD1-219ENST00000486339 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
PKD1-219ENST00000486339 FERMT3Q86UX7 667 aa15.93■□□□□ 0.14
PKD1-219ENST00000486339 IPO7O95373 1038 aaKnown RBP15.92■□□□□ 0.14
PKD1-219ENST00000486339 WASF1Q92558 559 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 LIMCH1Q9UPQ0 1083 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 LETM1O95202 739 aaPredicted RBP15.92■□□□□ 0.14
PKD1-219ENST00000486339 NYXQ9GZU5 481 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 UNC13BO14795 1591 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 MRE11P49959 708 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 PIBF1Q8WXW3 757 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 CDK5RAP3Q96JB5 506 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 TBC1D2Q9BYX2 928 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 TFCP2L1Q9NZI6 479 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms