RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 CD2APQ9Y5K6 639 aa9.64□□□□□ -0.87
APH1A-207ENST00000486308 PARP3Q9Y6F1 533 aa9.64□□□□□ -0.87
APH1A-207ENST00000486308 MAP3K15Q6ZN16 1313 aa9.63□□□□□ -0.87
APH1A-207ENST00000486308 NRXN2Q9P2S2 1712 aa9.63□□□□□ -0.87
APH1A-207ENST00000486308 HLFQ16534 295 aa9.63□□□□□ -0.87
APH1A-207ENST00000486308 CLEC4GQ6UXB4 293 aa9.63□□□□□ -0.87
APH1A-207ENST00000486308 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
APH1A-207ENST00000486308 KIF13BQ9NQT8 1826 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 ERVV-1B6SEH8 477 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 BICDL1Q6ZP65 573 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 MYH16Q9H6N6 1097 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 DBF4Q9UBU7 674 aaPredicted RBP9.62□□□□□ -0.87
APH1A-207ENST00000486308 ZNF652Q9Y2D9 606 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 ATP10DQ9P241 1426 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 KIAA1551Q9HCM1 1747 aa9.62□□□□□ -0.87
APH1A-207ENST00000486308 PXDNLA1KZ92 1463 aa9.61□□□□□ -0.87
APH1A-207ENST00000486308 SERPINB2P05120 415 aa9.61□□□□□ -0.87
APH1A-207ENST00000486308 EXOSC9Q06265 439 aaKnown RBP9.61□□□□□ -0.87
APH1A-207ENST00000486308 GOLGA2Q08379 1002 aa9.61□□□□□ -0.87
APH1A-207ENST00000486308 TWISTNBQ3B726 338 aaPredicted RBP9.61□□□□□ -0.87
APH1A-207ENST00000486308 COPS6Q7L5N1 327 aa9.61□□□□□ -0.87
APH1A-207ENST00000486308 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
APH1A-207ENST00000486308 HYPKQ9NX55 129 aa9.61□□□□□ -0.87
APH1A-207ENST00000486308 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
APH1A-207ENST00000486308 AIMP1Q12904 312 aaKnown RBP9.6□□□□□ -0.87
APH1A-207ENST00000486308 CCDC30Q5VVM6 783 aa9.6□□□□□ -0.87
APH1A-207ENST00000486308 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
APH1A-207ENST00000486308 SETDB2Q96T68 719 aa9.6□□□□□ -0.87
APH1A-207ENST00000486308 NIP7Q9Y221 180 aaKnown RBP eCLIP9.6□□□□□ -0.87
APH1A-207ENST00000486308 UBN2Q6ZU65 1347 aa9.59□□□□□ -0.87
APH1A-207ENST00000486308 E9PSI1 815 aa9.59□□□□□ -0.87
APH1A-207ENST00000486308 VAMP4O75379 141 aa9.59□□□□□ -0.87
APH1A-207ENST00000486308 TGFB2P61812 414 aa9.59□□□□□ -0.87
APH1A-207ENST00000486308 SLFN5Q08AF3 891 aa9.59□□□□□ -0.87
APH1A-207ENST00000486308 PRR5LQ6MZQ0 368 aa9.59□□□□□ -0.87
APH1A-207ENST00000486308 CDCA7LQ96GN5 454 aa9.59□□□□□ -0.87
APH1A-207ENST00000486308 CHMP4AQ9BY43 222 aa9.59□□□□□ -0.87
APH1A-207ENST00000486308 PHAXQ9H814 394 aaKnown RBP9.59□□□□□ -0.87
APH1A-207ENST00000486308 NUP98P52948 1817 aa9.59□□□□□ -0.88
APH1A-207ENST00000486308 ZNF34Q8IZ26 560 aa9.58□□□□□ -0.88
APH1A-207ENST00000486308 TRMT2AQ8IZ69 625 aaKnown RBP9.58□□□□□ -0.88
APH1A-207ENST00000486308 CNBD1Q8NA66 436 aa9.58□□□□□ -0.88
APH1A-207ENST00000486308 PLBD2Q8NHP8 589 aa9.58□□□□□ -0.88
APH1A-207ENST00000486308 IBTKQ9P2D0 1353 aaPredicted RBP9.58□□□□□ -0.88
APH1A-207ENST00000486308 A0A0G2JLW4 131 aa9.57□□□□□ -0.88
APH1A-207ENST00000486308 TCERG1O14776 1098 aaKnown RBP9.57□□□□□ -0.88
APH1A-207ENST00000486308 DPEP1P16444 411 aa9.57□□□□□ -0.88
APH1A-207ENST00000486308 KCNA3P22001 575 aa9.57□□□□□ -0.88
APH1A-207ENST00000486308 GPTP24298 496 aa9.57□□□□□ -0.88
APH1A-207ENST00000486308 HNRNPUQ00839 825 aaKnown RBP eCLIP9.57□□□□□ -0.88
APH1A-207ENST00000486308 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
APH1A-207ENST00000486308 NBPF5PQ86XG9 351 aaPredicted RBP9.57□□□□□ -0.88
APH1A-207ENST00000486308 CCDC24Q8N4L8 307 aa9.57□□□□□ -0.88
APH1A-207ENST00000486308 STK31Q9BXU1 1019 aa9.57□□□□□ -0.88
APH1A-207ENST00000486308 N4BP2Q86UW6 1770 aaPredicted RBP9.57□□□□□ -0.88
APH1A-207ENST00000486308 ANKRD31Q8N7Z5 1873 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 ANKRD36CQ5JPF3 1778 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 ARFGEF2Q9Y6D5 1785 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 ABCC12Q96J65 1359 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 FAM177BA6PVY3 158 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 NTSR2O95665 410 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 SLC4A2P04920 1241 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 YBX3P16989 372 aaKnown RBP eCLIP9.56□□□□□ -0.881e-9■■□□□ 11.9
APH1A-207ENST00000486308 CHRNA5P30532 468 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 ST5P78524 1137 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 TCIRG1Q13488 830 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 HSP90AB3PQ58FF7 597 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 SUSD4Q5VX71 490 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 G2E3Q7L622 706 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 BRIP1Q9BX63 1249 aa9.56□□□□□ -0.88
APH1A-207ENST00000486308 ADCY9O60503 1353 aa9.55□□□□□ -0.88
APH1A-207ENST00000486308 PARP10Q53GL7 1025 aa9.55□□□□□ -0.88
APH1A-207ENST00000486308 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
APH1A-207ENST00000486308 NLRP10Q86W26 655 aa9.55□□□□□ -0.88
APH1A-207ENST00000486308 PELP1Q8IZL8 1130 aaKnown RBP9.55□□□□□ -0.88
APH1A-207ENST00000486308 ISCA1Q9BUE6 129 aa9.55□□□□□ -0.88
APH1A-207ENST00000486308 NYXQ9GZU5 481 aa9.55□□□□□ -0.88
APH1A-207ENST00000486308 WWC3Q9ULE0 1092 aa9.55□□□□□ -0.88
APH1A-207ENST00000486308 COL11A2P13942 1736 aaPredicted RBP9.55□□□□□ -0.88
APH1A-207ENST00000486308 BRCA1P38398 1863 aaKnown RBP9.55□□□□□ -0.88
APH1A-207ENST00000486308 RIC1Q4ADV7 1423 aa9.55□□□□□ -0.88
APH1A-207ENST00000486308 KLRG2A4D1S0 409 aaPredicted RBP9.54□□□□□ -0.88
APH1A-207ENST00000486308 DCAF8L1A6NGE4 600 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 NPHP1O15259 732 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 DDX58O95786 925 aaKnown RBP9.54□□□□□ -0.88
APH1A-207ENST00000486308 PDE6BP35913 854 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 FLIIQ13045 1269 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 GPR162Q16538 588 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 ERFEQ4G0M1 354 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 RIC3Q7Z5B4 369 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 NUTM1Q86Y26 1132 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 C2CD5Q86YS7 1000 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 DLEC1Q9Y238 1755 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 TNRC6CQ9HCJ0 1690 aaKnown RBP9.54□□□□□ -0.88
APH1A-207ENST00000486308 RNF123Q5XPI4 1314 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 ZBED9Q6R2W3 1325 aa9.54□□□□□ -0.88
APH1A-207ENST00000486308 PI4KAP2A4QPH2 592 aa9.53□□□□□ -0.88
APH1A-207ENST00000486308 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms