RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 PLBD2Q8NHP8 589 aa18.14■□□□□ 0.49
COL9A1-207ENST00000486080 METTL22Q9BUU2 404 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-207ENST00000486080 ZNF831Q5JPB2 1677 aa18.13■□□□□ 0.49
COL9A1-207ENST00000486080 IGKV5-2P06315 115 aa18.13■□□□□ 0.49
COL9A1-207ENST00000486080 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
COL9A1-207ENST00000486080 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
COL9A1-207ENST00000486080 MYD88Q99836 296 aa18.13■□□□□ 0.49
COL9A1-207ENST00000486080 AFDNP55196 1824 aaKnown RBP18.13■□□□□ 0.49
COL9A1-207ENST00000486080 ALDH1L1O75891 902 aa18.12■□□□□ 0.49
COL9A1-207ENST00000486080 GNAI3P08754 354 aa18.12■□□□□ 0.49
COL9A1-207ENST00000486080 INTS5Q6P9B9 1019 aaKnown RBP18.12■□□□□ 0.49
COL9A1-207ENST00000486080 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
COL9A1-207ENST00000486080 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
COL9A1-207ENST00000486080 CRKLP46109 303 aaKnown RBP18.12■□□□□ 0.49
COL9A1-207ENST00000486080 LY75O60449 1722 aa18.11■□□□□ 0.49
COL9A1-207ENST00000486080 RREB1Q92766 1687 aa18.11■□□□□ 0.49
COL9A1-207ENST00000486080 GNAI2P04899 355 aa18.11■□□□□ 0.49
COL9A1-207ENST00000486080 NBPF7P0C2Y1 421 aaPredicted RBP18.11■□□□□ 0.49
COL9A1-207ENST00000486080 CCDC87Q9NVE4 849 aa18.11■□□□□ 0.49
COL9A1-207ENST00000486080 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
COL9A1-207ENST00000486080 NEXNQ0ZGT2 675 aa18.1■□□□□ 0.49
COL9A1-207ENST00000486080 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
COL9A1-207ENST00000486080 LINC00116Q8NCU8 138 aa18.1■□□□□ 0.49
COL9A1-207ENST00000486080 NEURL1BA8MQ27 555 aa18.09■□□□□ 0.49
COL9A1-207ENST00000486080 ATP5J2-PTCD1G3V325 749 aa18.09■□□□□ 0.49
COL9A1-207ENST00000486080 ANKRD44Q8N8A2 993 aa18.09■□□□□ 0.49
COL9A1-207ENST00000486080 ARXQ96QS3 562 aa18.09■□□□□ 0.49
COL9A1-207ENST00000486080 LRRFIP2Q9Y608 721 aaKnown RBP18.09■□□□□ 0.49
COL9A1-207ENST00000486080 TRIM37O94972 964 aa18.09■□□□□ 0.49
COL9A1-207ENST00000486080 IL6STP40189 918 aaPredicted RBP18.08■□□□□ 0.48
COL9A1-207ENST00000486080 C9orf78Q9NZ63 289 aaPredicted RBP18.08■□□□□ 0.48
COL9A1-207ENST00000486080 TAF1LQ8IZX4 1826 aa18.07■□□□□ 0.48
COL9A1-207ENST00000486080 KIF6Q6ZMV9 814 aa18.07■□□□□ 0.48
COL9A1-207ENST00000486080 RPAP2Q8IXW5 612 aaPredicted RBP18.07■□□□□ 0.48
COL9A1-207ENST00000486080 CCNL1Q9UK58 526 aaPredicted RBP18.07■□□□□ 0.48
COL9A1-207ENST00000486080 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
COL9A1-207ENST00000486080 GCKRQ14397 625 aa18.07■□□□□ 0.48
COL9A1-207ENST00000486080 GRM8O00222 908 aa18.06■□□□□ 0.48
COL9A1-207ENST00000486080 SMC5Q8IY18 1101 aa18.06■□□□□ 0.48
COL9A1-207ENST00000486080 TBC1D2BQ9UPU7 963 aa18.06■□□□□ 0.48
COL9A1-207ENST00000486080 MAP3K15Q6ZN16 1313 aa18.06■□□□□ 0.48
COL9A1-207ENST00000486080 NUP98P52948 1817 aa18.05■□□□□ 0.48
COL9A1-207ENST00000486080 HLFQ16534 295 aa18.05■□□□□ 0.48
COL9A1-207ENST00000486080 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
COL9A1-207ENST00000486080 JARID2Q92833 1246 aaPredicted RBP18.05■□□□□ 0.48
COL9A1-207ENST00000486080 UTYO14607 1347 aa18.05■□□□□ 0.48
COL9A1-207ENST00000486080 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
COL9A1-207ENST00000486080 PDZRN3Q9UPQ7 1066 aa18.05■□□□□ 0.48
COL9A1-207ENST00000486080 PNMA6EA0A0J9YXQ4 647 aa18.04■□□□□ 0.48
COL9A1-207ENST00000486080 IBTKQ9P2D0 1353 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-207ENST00000486080 ATP8B2P98198 1209 aa18.03■□□□□ 0.48
COL9A1-207ENST00000486080 TCIRG1Q13488 830 aa18.03■□□□□ 0.48
COL9A1-207ENST00000486080 ILDR2Q71H61 639 aa18.03■□□□□ 0.48
COL9A1-207ENST00000486080 NPM2Q86SE8 214 aaKnown RBP18.03■□□□□ 0.48
COL9A1-207ENST00000486080 CNTNAP4Q9C0A0 1308 aa18.03■□□□□ 0.48
COL9A1-207ENST00000486080 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
COL9A1-207ENST00000486080 SMIM5Q71RC9 77 aa18.02■□□□□ 0.48
COL9A1-207ENST00000486080 KAZALD1Q96I82 304 aa18.02■□□□□ 0.48
COL9A1-207ENST00000486080 SUCLG2Q96I99 432 aa18.02■□□□□ 0.48
COL9A1-207ENST00000486080 LRRC4BQ9NT99 713 aa18.02■□□□□ 0.48
COL9A1-207ENST00000486080 ANKRD36CQ5JPF3 1778 aa18.02■□□□□ 0.48
COL9A1-207ENST00000486080 ISCA1Q9BUE6 129 aa18.02■□□□□ 0.47
COL9A1-207ENST00000486080 CWC25Q9NXE8 425 aaPredicted RBP18.02■□□□□ 0.47
COL9A1-207ENST00000486080 A0A087WZG4 1122 aa18.01■□□□□ 0.47
COL9A1-207ENST00000486080 RGS3P49796 1198 aa18.01■□□□□ 0.47
COL9A1-207ENST00000486080 UBE3BQ7Z3V4 1068 aa18.01■□□□□ 0.47
COL9A1-207ENST00000486080 PPP1R42Q7Z4L9 355 aa18.01■□□□□ 0.47
COL9A1-207ENST00000486080 GCC1Q96CN9 775 aa18.01■□□□□ 0.47
COL9A1-207ENST00000486080 DCTPP1Q9H773 170 aa18.01■□□□□ 0.47
COL9A1-207ENST00000486080 COL15A1P39059 1388 aa18.01■□□□□ 0.47
COL9A1-207ENST00000486080 ERVV-1B6SEH8 477 aa18■□□□□ 0.47
COL9A1-207ENST00000486080 HMMRO75330 724 aa18■□□□□ 0.47
COL9A1-207ENST00000486080 RC3H1Q5TC82 1133 aaKnown RBP18■□□□□ 0.47
COL9A1-207ENST00000486080 CCDC191Q8NCU4 936 aa18■□□□□ 0.47
COL9A1-207ENST00000486080 C4BP0C0L5 1744 aa18■□□□□ 0.47
COL9A1-207ENST00000486080 H7C1W4 665 aa17.99■□□□□ 0.47
COL9A1-207ENST00000486080 CAMTA2O94983 1202 aa17.99■□□□□ 0.47
COL9A1-207ENST00000486080 GPTP24298 496 aa17.99■□□□□ 0.47
COL9A1-207ENST00000486080 CASP7P55210 303 aa17.99■□□□□ 0.47
COL9A1-207ENST00000486080 NUCB1Q02818 461 aa17.99■□□□□ 0.47
COL9A1-207ENST00000486080 RTL5Q5HYW3 569 aaPredicted RBP17.99■□□□□ 0.47
COL9A1-207ENST00000486080 BICC1Q9H694 974 aaKnown RBP17.99■□□□□ 0.47
COL9A1-207ENST00000486080 GNPATO15228 680 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 SRGAP3O43295 1099 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
COL9A1-207ENST00000486080 EPHA10Q5JZY3 1008 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 ANKRD45Q5TZF3 282 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 SSH3Q8TE77 659 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 RPS6KA4O75676 772 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 POLA2Q14181 598 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 BCORQ6W2J9 1755 aa17.98■□□□□ 0.47
COL9A1-207ENST00000486080 HSP90AB3PQ58FF7 597 aa17.97■□□□□ 0.47
COL9A1-207ENST00000486080 PROM2Q8N271 834 aa17.97■□□□□ 0.47
COL9A1-207ENST00000486080 TNS1Q9HBL0 1735 aaKnown RBP17.96■□□□□ 0.47
COL9A1-207ENST00000486080 APBB1O00213 710 aa17.96■□□□□ 0.47
COL9A1-207ENST00000486080 APBA3O96018 575 aa17.96■□□□□ 0.47
COL9A1-207ENST00000486080 PDE4AP27815 886 aa17.96■□□□□ 0.47
COL9A1-207ENST00000486080 MTX1Q13505 466 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms