RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 OLFM4Q6UX06 510 aa13.54□□□□□ -0.24
SND1-213ENST00000486037 PAXIP1Q6ZW49 1069 aaPredicted RBP13.54□□□□□ -0.24
SND1-213ENST00000486037 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
SND1-213ENST00000486037 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
SND1-213ENST00000486037 DDX21Q9NR30 783 aaKnown RBP eCLIP13.54□□□□□ -0.243e-11■■□□□ 13.7
SND1-213ENST00000486037 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
SND1-213ENST00000486037 TNNT2P45379 298 aaPredicted RBP13.53□□□□□ -0.24
SND1-213ENST00000486037 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
SND1-213ENST00000486037 C7orf43Q8WVR3 580 aa13.53□□□□□ -0.24
SND1-213ENST00000486037 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
SND1-213ENST00000486037 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.25
SND1-213ENST00000486037 PDE6BP35913 854 aa13.52□□□□□ -0.25
SND1-213ENST00000486037 CST9Q5W186 159 aa13.52□□□□□ -0.25
SND1-213ENST00000486037 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
SND1-213ENST00000486037 SCN7AQ01118 1682 aa13.51□□□□□ -0.25
SND1-213ENST00000486037 TRAF5O00463 557 aa13.51□□□□□ -0.25
SND1-213ENST00000486037 SRGNP10124 158 aa13.51□□□□□ -0.25
SND1-213ENST00000486037 SOX10P56693 466 aa13.51□□□□□ -0.25
SND1-213ENST00000486037 DGKZQ13574 1117 aa13.51□□□□□ -0.25
SND1-213ENST00000486037 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
SND1-213ENST00000486037 C1orf141Q5JVX7 400 aa13.51□□□□□ -0.25
SND1-213ENST00000486037 BEGAINQ9BUH8 593 aa13.51□□□□□ -0.25
SND1-213ENST00000486037 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
SND1-213ENST00000486037 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
SND1-213ENST00000486037 CNKSR1Q969H4 720 aa13.5□□□□□ -0.25
SND1-213ENST00000486037 SLC52A2Q9HAB3 445 aa13.5□□□□□ -0.25
SND1-213ENST00000486037 COL4A5P29400 1685 aa13.5□□□□□ -0.25
SND1-213ENST00000486037 PNMA8AQ86V59 439 aaPredicted RBP13.49□□□□□ -0.25
SND1-213ENST00000486037 PDZRN3Q9UPQ7 1066 aa13.49□□□□□ -0.25
SND1-213ENST00000486037 MRC1P22897 1456 aa13.48□□□□□ -0.25
SND1-213ENST00000486037 FZD9O00144 591 aa13.48□□□□□ -0.25
SND1-213ENST00000486037 ECE1P42892 770 aa13.48□□□□□ -0.25
SND1-213ENST00000486037 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■■■□ 23.5
SND1-213ENST00000486037 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
SND1-213ENST00000486037 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
SND1-213ENST00000486037 TLL2Q9Y6L7 1015 aa13.48□□□□□ -0.25
SND1-213ENST00000486037 TRPM7Q96QT4 1865 aa13.48□□□□□ -0.25
SND1-213ENST00000486037 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
SND1-213ENST00000486037 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
SND1-213ENST00000486037 EPS15P42566 896 aa13.46□□□□□ -0.25
SND1-213ENST00000486037 SOGA3Q5TF21 947 aa13.46□□□□□ -0.25
SND1-213ENST00000486037 PRPF38BQ5VTL8 546 aaKnown RBP13.46□□□□□ -0.25
SND1-213ENST00000486037 CNBD1Q8NA66 436 aa13.46□□□□□ -0.25
SND1-213ENST00000486037 ZIC5Q96T25 663 aa13.46□□□□□ -0.25
SND1-213ENST00000486037 UBR2Q8IWV8 1755 aa13.45□□□□□ -0.26
SND1-213ENST00000486037 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
SND1-213ENST00000486037 MAP2K2P36507 400 aa13.45□□□□□ -0.26
SND1-213ENST00000486037 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
SND1-213ENST00000486037 SLC51AQ86UW1 340 aa13.45□□□□□ -0.26
SND1-213ENST00000486037 GPC2Q8N158 579 aa13.45□□□□□ -0.26
SND1-213ENST00000486037 SNED1Q8TER0 1413 aa13.45□□□□□ -0.26
SND1-213ENST00000486037 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
SND1-213ENST00000486037 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
SND1-213ENST00000486037 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
SND1-213ENST00000486037 SCNN1DP51172 638 aa13.44□□□□□ -0.26
SND1-213ENST00000486037 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
SND1-213ENST00000486037 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
SND1-213ENST00000486037 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
SND1-213ENST00000486037 SAPCD2Q86UD0 394 aa13.43□□□□□ -0.26
SND1-213ENST00000486037 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
SND1-213ENST00000486037 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
SND1-213ENST00000486037 GJA3Q9Y6H8 435 aa13.43□□□□□ -0.26
SND1-213ENST00000486037 BCORQ6W2J9 1755 aa13.43□□□□□ -0.26
SND1-213ENST00000486037 A0A087WZG4 1122 aa13.42□□□□□ -0.26
SND1-213ENST00000486037 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
SND1-213ENST00000486037 ST5P78524 1137 aa13.42□□□□□ -0.26
SND1-213ENST00000486037 SETDB2Q96T68 719 aa13.42□□□□□ -0.26
SND1-213ENST00000486037 NPHP1O15259 732 aa13.41□□□□□ -0.26
SND1-213ENST00000486037 CA12O43570 354 aa13.41□□□□□ -0.26
SND1-213ENST00000486037 CELF2O95319 508 aaKnown RBP13.4□□□□□ -0.26
SND1-213ENST00000486037 NPR1P16066 1061 aa13.4□□□□□ -0.26
SND1-213ENST00000486037 KLRG2A4D1S0 409 aaPredicted RBP13.39□□□□□ -0.27
SND1-213ENST00000486037 STARD3NLO95772 234 aa13.39□□□□□ -0.27
SND1-213ENST00000486037 A1BGP04217 495 aa13.39□□□□□ -0.27
SND1-213ENST00000486037 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
SND1-213ENST00000486037 CDCA8Q53HL2 280 aa13.39□□□□□ -0.27
SND1-213ENST00000486037 RTKN2Q8IZC4 609 aa13.39□□□□□ -0.27
SND1-213ENST00000486037 ZNF496Q96IT1 587 aaPredicted RBP13.39□□□□□ -0.27
SND1-213ENST00000486037 GLIS2Q9BZE0 524 aaPredicted RBP13.39□□□□□ -0.27
SND1-213ENST00000486037 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
SND1-213ENST00000486037 IL13P35225 146 aa13.38□□□□□ -0.27
SND1-213ENST00000486037 HEG1Q9ULI3 1381 aa13.37□□□□□ -0.27
SND1-213ENST00000486037 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
SND1-213ENST00000486037 EIF6P56537 245 aaKnown RBP13.37□□□□□ -0.27
SND1-213ENST00000486037 DLK2Q6UY11 383 aa13.37□□□□□ -0.27
SND1-213ENST00000486037 USP50Q70EL3 339 aaPredicted RBP13.37□□□□□ -0.27
SND1-213ENST00000486037 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
SND1-213ENST00000486037 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
SND1-213ENST00000486037 MTHFSDQ2M296 383 aaKnown RBP13.36□□□□□ -0.27
SND1-213ENST00000486037 HHIPL1Q96JK4 782 aa13.36□□□□□ -0.27
SND1-213ENST00000486037 PSMD1Q99460 953 aa13.36□□□□□ -0.27
SND1-213ENST00000486037 ZNF408Q9H9D4 720 aa13.36□□□□□ -0.27
SND1-213ENST00000486037 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
SND1-213ENST00000486037 FAM177BA6PVY3 158 aa13.35□□□□□ -0.27
SND1-213ENST00000486037 DZIP3Q86Y13 1208 aaKnown RBP13.35□□□□□ -0.27
SND1-213ENST00000486037 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
SND1-213ENST00000486037 HMOX1P09601 288 aa13.34□□□□□ -0.27
SND1-213ENST00000486037 TTC5Q8N0Z6 440 aa13.34□□□□□ -0.27
SND1-213ENST00000486037 FAM155AB1AL88 458 aaPredicted RBP13.33□□□□□ -0.28
SND1-213ENST00000486037 KCNQ3O43525 872 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms