RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 NEXNQ0ZGT2 675 aa11.95□□□□□ -0.5
CTSA-208ENST00000485627 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
CTSA-208ENST00000485627 XAGE3Q8WTP9 111 aa11.95□□□□□ -0.5
CTSA-208ENST00000485627 C1orf115Q9H7X2 142 aa11.95□□□□□ -0.5
CTSA-208ENST00000485627 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
CTSA-208ENST00000485627 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
CTSA-208ENST00000485627 GNAI2P04899 355 aa11.94□□□□□ -0.5
CTSA-208ENST00000485627 C1QTNF8P60827 252 aa11.94□□□□□ -0.5
CTSA-208ENST00000485627 PDIA6Q15084 440 aa11.94□□□□□ -0.5
CTSA-208ENST00000485627 COPS6Q7L5N1 327 aa11.94□□□□□ -0.5
CTSA-208ENST00000485627 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
CTSA-208ENST00000485627 MEIS3Q99687 375 aa11.94□□□□□ -0.5
CTSA-208ENST00000485627 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
CTSA-208ENST00000485627 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
CTSA-208ENST00000485627 UTRNP46939 3433 aa11.93□□□□□ -0.5
CTSA-208ENST00000485627 ALDH1L1O75891 902 aa11.93□□□□□ -0.5
CTSA-208ENST00000485627 UBTFL1P0CB47 393 aaPredicted RBP11.93□□□□□ -0.5
CTSA-208ENST00000485627 BEND3Q5T5X7 828 aa11.93□□□□□ -0.5
CTSA-208ENST00000485627 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
CTSA-208ENST00000485627 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
CTSA-208ENST00000485627 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
CTSA-208ENST00000485627 PAPPAQ13219 1627 aa11.93□□□□□ -0.5
CTSA-208ENST00000485627 ADCY9O60503 1353 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 KAT6BQ8WYB5 2073 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 C5P01031 1676 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 HMMRO75330 724 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 A1BGP04217 495 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 PTGER2P43116 358 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 PIP4K2AP48426 406 aaPredicted RBP11.92□□□□□ -0.5
CTSA-208ENST00000485627 DNAJC10Q8IXB1 793 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 GCC1Q96CN9 775 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
CTSA-208ENST00000485627 ATP10DQ9P241 1426 aa11.92□□□□□ -0.5
CTSA-208ENST00000485627 ANKRD44Q8N8A2 993 aa11.91□□□□□ -0.5
CTSA-208ENST00000485627 LINS1Q8NG48 757 aa11.91□□□□□ -0.5
CTSA-208ENST00000485627 FHDC1Q9C0D6 1143 aaPredicted RBP11.91□□□□□ -0.5
CTSA-208ENST00000485627 C9orf78Q9NZ63 289 aaPredicted RBP11.91□□□□□ -0.5
CTSA-208ENST00000485627 CASZ1Q86V15 1759 aa11.91□□□□□ -0.5
CTSA-208ENST00000485627 UBR2Q8IWV8 1755 aa11.91□□□□□ -0.5
CTSA-208ENST00000485627 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
CTSA-208ENST00000485627 ITGB4P16144 1822 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 RGS3P49796 1198 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 CEP85Q6P2H3 762 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 PROM2Q8N271 834 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 PLBD2Q8NHP8 589 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 MYD88Q99836 296 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 METTL22Q9BUU2 404 aaPredicted RBP11.9□□□□□ -0.5
CTSA-208ENST00000485627 USP44Q9H0E7 712 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
CTSA-208ENST00000485627 ZNF330Q9Y3S2 320 aaPredicted RBP11.9□□□□□ -0.5
CTSA-208ENST00000485627 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
CTSA-208ENST00000485627 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
CTSA-208ENST00000485627 NBPF10Q6P3W6 841 aaKnown RBP11.89□□□□□ -0.51
CTSA-208ENST00000485627 KIF6Q6ZMV9 814 aa11.89□□□□□ -0.51
CTSA-208ENST00000485627 LRP10Q7Z4F1 713 aa11.89□□□□□ -0.51
CTSA-208ENST00000485627 SMC5Q8IY18 1101 aa11.89□□□□□ -0.51
CTSA-208ENST00000485627 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
CTSA-208ENST00000485627 ARXQ96QS3 562 aa11.89□□□□□ -0.51
CTSA-208ENST00000485627 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
CTSA-208ENST00000485627 PALLDQ8WX93 1383 aa11.89□□□□□ -0.51
CTSA-208ENST00000485627 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
CTSA-208ENST00000485627 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
CTSA-208ENST00000485627 SIK1P57059 783 aa11.88□□□□□ -0.51
CTSA-208ENST00000485627 CWF19L2Q2TBE0 894 aaKnown RBP11.88□□□□□ -0.51
CTSA-208ENST00000485627 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
CTSA-208ENST00000485627 LRRFIP2Q9Y608 721 aaKnown RBP11.88□□□□□ -0.51
CTSA-208ENST00000485627 CAPN15O75808 1086 aa11.87□□□□□ -0.51
CTSA-208ENST00000485627 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
CTSA-208ENST00000485627 POLA2Q14181 598 aa11.87□□□□□ -0.51
CTSA-208ENST00000485627 ANKRD45Q5TZF3 282 aa11.87□□□□□ -0.51
CTSA-208ENST00000485627 SIRT2Q8IXJ6 389 aa11.87□□□□□ -0.51
CTSA-208ENST00000485627 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
CTSA-208ENST00000485627 GRM8O00222 908 aa11.86□□□□□ -0.51
CTSA-208ENST00000485627 TTLL7Q6ZT98 887 aa11.86□□□□□ -0.51
CTSA-208ENST00000485627 SLC4A9Q96Q91 983 aa11.86□□□□□ -0.51
CTSA-208ENST00000485627 ZBTB3Q9H5J0 574 aa11.86□□□□□ -0.51
CTSA-208ENST00000485627 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
CTSA-208ENST00000485627 IBTKQ9P2D0 1353 aaPredicted RBP11.85□□□□□ -0.51
CTSA-208ENST00000485627 IGKV5-2P06315 115 aa11.85□□□□□ -0.51
CTSA-208ENST00000485627 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
CTSA-208ENST00000485627 IL6STP40189 918 aaPredicted RBP11.85□□□□□ -0.51
CTSA-208ENST00000485627 NUCB1Q02818 461 aa11.85□□□□□ -0.51
CTSA-208ENST00000485627 GCKRQ14397 625 aa11.85□□□□□ -0.51
CTSA-208ENST00000485627 CHD1LQ86WJ1 897 aa11.85□□□□□ -0.51
CTSA-208ENST00000485627 SKAP1Q86WV1 359 aa11.85□□□□□ -0.51
CTSA-208ENST00000485627 CCDC87Q9NVE4 849 aa11.85□□□□□ -0.51
CTSA-208ENST00000485627 ZBTB1Q9Y2K1 713 aa11.85□□□□□ -0.51
CTSA-208ENST00000485627 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
CTSA-208ENST00000485627 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
CTSA-208ENST00000485627 PLSCR1O15162 318 aa11.84□□□□□ -0.51
CTSA-208ENST00000485627 CRKLP46109 303 aaKnown RBP11.84□□□□□ -0.51
CTSA-208ENST00000485627 HSP90AB3PQ58FF7 597 aa11.84□□□□□ -0.51
CTSA-208ENST00000485627 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
CTSA-208ENST00000485627 CWC25Q9NXE8 425 aaPredicted RBP11.84□□□□□ -0.51
CTSA-208ENST00000485627 CEP350Q5VT06 3117 aa11.84□□□□□ -0.51
CTSA-208ENST00000485627 A0A087WZG4 1122 aa11.83□□□□□ -0.52
CTSA-208ENST00000485627 SRGAP3O43295 1099 aa11.83□□□□□ -0.52
CTSA-208ENST00000485627 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
CTSA-208ENST00000485627 CCDC191Q8NCU4 936 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms