RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
SSR4-210ENST00000485612 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
SSR4-210ENST00000485612 A0A087WZG4 1122 aa16.66■□□□□ 0.26
SSR4-210ENST00000485612 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
SSR4-210ENST00000485612 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
SSR4-210ENST00000485612 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
SSR4-210ENST00000485612 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
SSR4-210ENST00000485612 LGR6Q9HBX8 967 aa16.65■□□□□ 0.26
SSR4-210ENST00000485612 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
SSR4-210ENST00000485612 NPHP1O15259 732 aa16.64■□□□□ 0.25
SSR4-210ENST00000485612 SRGNP10124 158 aa16.64■□□□□ 0.25
SSR4-210ENST00000485612 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
SSR4-210ENST00000485612 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
SSR4-210ENST00000485612 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
SSR4-210ENST00000485612 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
SSR4-210ENST00000485612 AKAP4Q5JQC9 854 aa16.63■□□□□ 0.25
SSR4-210ENST00000485612 ZNF277Q9NRM2 450 aaPredicted RBP16.63■□□□□ 0.25
SSR4-210ENST00000485612 ADAMTSL1Q8N6G6 1762 aa16.63■□□□□ 0.25
SSR4-210ENST00000485612 SLX4Q8IY92 1834 aa16.63■□□□□ 0.25
SSR4-210ENST00000485612 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
SSR4-210ENST00000485612 ST5P78524 1137 aa16.62■□□□□ 0.25
SSR4-210ENST00000485612 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSR4-210ENST00000485612 SULT6B1Q6IMI4 303 aa16.62■□□□□ 0.25
SSR4-210ENST00000485612 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
SSR4-210ENST00000485612 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
SSR4-210ENST00000485612 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
SSR4-210ENST00000485612 STARD3NLO95772 234 aa16.61■□□□□ 0.25
SSR4-210ENST00000485612 MAP2K2P36507 400 aa16.61■□□□□ 0.25
SSR4-210ENST00000485612 FMR1Q06787 632 aaKnown RBP eCLIP16.61■□□□□ 0.25
SSR4-210ENST00000485612 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
SSR4-210ENST00000485612 TNRC18O15417 2968 aaPredicted RBP16.6■□□□□ 0.25
SSR4-210ENST00000485612 FZD9O00144 591 aa16.6■□□□□ 0.25
SSR4-210ENST00000485612 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
SSR4-210ENST00000485612 CA12O43570 354 aa16.6■□□□□ 0.25
SSR4-210ENST00000485612 AOC2O75106 756 aa16.6■□□□□ 0.25
SSR4-210ENST00000485612 DGKZQ13574 1117 aa16.6■□□□□ 0.25
SSR4-210ENST00000485612 GPC2Q8N158 579 aa16.6■□□□□ 0.25
SSR4-210ENST00000485612 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
SSR4-210ENST00000485612 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
SSR4-210ENST00000485612 CST9Q5W186 159 aa16.59■□□□□ 0.25
SSR4-210ENST00000485612 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
SSR4-210ENST00000485612 TLL2Q9Y6L7 1015 aa16.59■□□□□ 0.25
SSR4-210ENST00000485612 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
SSR4-210ENST00000485612 IARSP41252 1262 aaKnown RBP16.57■□□□□ 0.24
SSR4-210ENST00000485612 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
SSR4-210ENST00000485612 NPR1P16066 1061 aa16.56■□□□□ 0.24
SSR4-210ENST00000485612 LMOD1P29536 600 aaPredicted RBP16.56■□□□□ 0.24
SSR4-210ENST00000485612 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
SSR4-210ENST00000485612 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
SSR4-210ENST00000485612 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
SSR4-210ENST00000485612 TRAF5O00463 557 aa16.55■□□□□ 0.24
SSR4-210ENST00000485612 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
SSR4-210ENST00000485612 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
SSR4-210ENST00000485612 TTC5Q8N0Z6 440 aa16.55■□□□□ 0.24
SSR4-210ENST00000485612 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
SSR4-210ENST00000485612 JDP2Q8WYK2 163 aa16.55■□□□□ 0.24
SSR4-210ENST00000485612 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
SSR4-210ENST00000485612 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
SSR4-210ENST00000485612 IL13P35225 146 aa16.54■□□□□ 0.24
SSR4-210ENST00000485612 EIF6P56537 245 aaKnown RBP16.54■□□□□ 0.24
SSR4-210ENST00000485612 MRC1P22897 1456 aa16.54■□□□□ 0.24
SSR4-210ENST00000485612 ARFGEF2Q9Y6D5 1785 aa16.54■□□□□ 0.24
SSR4-210ENST00000485612 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
SSR4-210ENST00000485612 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
SSR4-210ENST00000485612 EPS15P42566 896 aa16.53■□□□□ 0.24
SSR4-210ENST00000485612 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
SSR4-210ENST00000485612 PRPF38BQ5VTL8 546 aaKnown RBP16.53■□□□□ 0.24
SSR4-210ENST00000485612 NBPF5PQ86XG9 351 aaPredicted RBP16.53■□□□□ 0.24
SSR4-210ENST00000485612 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
SSR4-210ENST00000485612 SOX10P56693 466 aa16.52■□□□□ 0.24
SSR4-210ENST00000485612 AMER1Q5JTC6 1135 aaPredicted RBP16.52■□□□□ 0.24
SSR4-210ENST00000485612 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
SSR4-210ENST00000485612 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
SSR4-210ENST00000485612 KNSTRNQ9Y448 316 aa16.52■□□□□ 0.24
SSR4-210ENST00000485612 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
SSR4-210ENST00000485612 KIF7Q2M1P5 1343 aa16.51■□□□□ 0.23
SSR4-210ENST00000485612 SCN7AQ01118 1682 aa16.51■□□□□ 0.23
SSR4-210ENST00000485612 KLRG2A4D1S0 409 aaPredicted RBP16.51■□□□□ 0.23
SSR4-210ENST00000485612 SCNN1DP51172 638 aa16.51■□□□□ 0.23
SSR4-210ENST00000485612 A1BGP04217 495 aa16.5■□□□□ 0.23
SSR4-210ENST00000485612 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
SSR4-210ENST00000485612 CIAPIN1Q6FI81 312 aa16.5■□□□□ 0.23
SSR4-210ENST00000485612 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
SSR4-210ENST00000485612 HHIPL1Q96JK4 782 aa16.5■□□□□ 0.23
SSR4-210ENST00000485612 CELF2O95319 508 aaKnown RBP16.49■□□□□ 0.23
SSR4-210ENST00000485612 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
SSR4-210ENST00000485612 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
SSR4-210ENST00000485612 PSMD1Q99460 953 aa16.49■□□□□ 0.23
SSR4-210ENST00000485612 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
SSR4-210ENST00000485612 HMOX1P09601 288 aa16.48■□□□□ 0.23
SSR4-210ENST00000485612 TPTE2Q6XPS3 522 aa16.48■□□□□ 0.23
SSR4-210ENST00000485612 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
SSR4-210ENST00000485612 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
SSR4-210ENST00000485612 TRPM7Q96QT4 1865 aa16.47■□□□□ 0.23
SSR4-210ENST00000485612 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
SSR4-210ENST00000485612 PDE4DIPQ5VU43 2346 aa16.46■□□□□ 0.23
SSR4-210ENST00000485612 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
SSR4-210ENST00000485612 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
SSR4-210ENST00000485612 PER1O15534 1290 aaPredicted RBP16.44■□□□□ 0.22
SSR4-210ENST00000485612 NOGQ13253 232 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms