RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ARXQ96QS3 562 aa25.56■■□□□ 1.68
COL6A2-208ENST00000485591 SLC4A2P04920 1241 aa25.55■■□□□ 1.68
COL6A2-208ENST00000485591 BCL2L12Q9HB09 334 aa25.55■■□□□ 1.68
COL6A2-208ENST00000485591 MAP3K15Q6ZN16 1313 aa25.55■■□□□ 1.68
COL6A2-208ENST00000485591 ERVV-1B6SEH8 477 aa25.54■■□□□ 1.68
COL6A2-208ENST00000485591 PHAXQ9H814 394 aaKnown RBP25.54■■□□□ 1.68
COL6A2-208ENST00000485591 LRP5O75197 1615 aa25.54■■□□□ 1.68
COL6A2-208ENST00000485591 AIMP1Q12904 312 aaKnown RBP25.53■■□□□ 1.68
COL6A2-208ENST00000485591 ALDH1L2Q3SY69 923 aa25.53■■□□□ 1.68
COL6A2-208ENST00000485591 NLGN1Q8N2Q7 840 aa25.53■■□□□ 1.68
COL6A2-208ENST00000485591 FKBP8Q14318 412 aa25.52■■□□□ 1.68
COL6A2-208ENST00000485591 MSL1Q68DK7 614 aa25.52■■□□□ 1.68
COL6A2-208ENST00000485591 ZNF652Q9Y2D9 606 aa25.52■■□□□ 1.68
COL6A2-208ENST00000485591 CLEC4GQ6UXB4 293 aa25.51■■□□□ 1.67
COL6A2-208ENST00000485591 SSH1Q8WYL5 1049 aa25.51■■□□□ 1.67
COL6A2-208ENST00000485591 ZBTB3Q9H5J0 574 aa25.51■■□□□ 1.67
COL6A2-208ENST00000485591 G2E3Q7L622 706 aa25.5■■□□□ 1.67
COL6A2-208ENST00000485591 PLBD2Q8NHP8 589 aa25.5■■□□□ 1.67
COL6A2-208ENST00000485591 SPON1Q9HCB6 807 aa25.5■■□□□ 1.67
COL6A2-208ENST00000485591 ATP10DQ9P241 1426 aa25.5■■□□□ 1.67
COL6A2-208ENST00000485591 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
COL6A2-208ENST00000485591 FLIIQ13045 1269 aa25.49■■□□□ 1.67
COL6A2-208ENST00000485591 HLFQ16534 295 aa25.49■■□□□ 1.67
COL6A2-208ENST00000485591 MRPL50Q8N5N7 158 aaKnown RBP25.49■■□□□ 1.67
COL6A2-208ENST00000485591 AFDNP55196 1824 aaKnown RBP25.49■■□□□ 1.67
COL6A2-208ENST00000485591 NRXN2Q9P2S2 1712 aa25.49■■□□□ 1.67
COL6A2-208ENST00000485591 DDX58O95786 925 aaKnown RBP25.48■■□□□ 1.67
COL6A2-208ENST00000485591 RARSP54136 660 aaKnown RBP25.48■■□□□ 1.67
COL6A2-208ENST00000485591 GIGYF2Q6Y7W6 1299 aaKnown RBP25.48■■□□□ 1.67
COL6A2-208ENST00000485591 ANKRD13DQ6ZTN6 518 aa25.48■■□□□ 1.67
COL6A2-208ENST00000485591 SGIP1Q9BQI5 828 aa25.48■■□□□ 1.67
COL6A2-208ENST00000485591 PTGER2P43116 358 aa25.47■■□□□ 1.67
COL6A2-208ENST00000485591 SMC4Q9NTJ3 1288 aa25.47■■□□□ 1.67
COL6A2-208ENST00000485591 TM4SF1P30408 202 aa25.46■■□□□ 1.67
COL6A2-208ENST00000485591 NFIXQ14938 502 aa25.46■■□□□ 1.67
COL6A2-208ENST00000485591 TBC1D9BQ66K14 1250 aa25.46■■□□□ 1.67
COL6A2-208ENST00000485591 BCL2L13Q9BXK5 485 aa25.46■■□□□ 1.67
COL6A2-208ENST00000485591 MMP10P09238 476 aa25.45■■□□□ 1.66
COL6A2-208ENST00000485591 POLD1P28340 1107 aa25.45■■□□□ 1.66
COL6A2-208ENST00000485591 BRPF1P55201 1214 aaPredicted RBP25.45■■□□□ 1.66
COL6A2-208ENST00000485591 ADCY9O60503 1353 aa25.44■■□□□ 1.66
COL6A2-208ENST00000485591 FKBP5Q13451 457 aaPredicted RBP25.44■■□□□ 1.66
COL6A2-208ENST00000485591 HSP90AB3PQ58FF7 597 aa25.44■■□□□ 1.66
COL6A2-208ENST00000485591 KSR2Q6VAB6 950 aa25.44■■□□□ 1.66
COL6A2-208ENST00000485591 RIC3Q7Z5B4 369 aa25.44■■□□□ 1.66
COL6A2-208ENST00000485591 CARMIL3Q8ND23 1372 aa25.44■■□□□ 1.66
COL6A2-208ENST00000485591 DDR1Q08345 913 aa25.43■■□□□ 1.66
COL6A2-208ENST00000485591 PTPRCP08575 1304 aa25.42■■□□□ 1.66
COL6A2-208ENST00000485591 N4BP2Q86UW6 1770 aaPredicted RBP25.42■■□□□ 1.66
COL6A2-208ENST00000485591 PI4KAP2A4QPH2 592 aa25.42■■□□□ 1.66
COL6A2-208ENST00000485591 PI4KAP1Q8N8J0 262 aa25.42■■□□□ 1.66
COL6A2-208ENST00000485591 KIF13BQ9NQT8 1826 aa25.42■■□□□ 1.66
COL6A2-208ENST00000485591 POLRMTO00411 1230 aaKnown RBP25.41■■□□□ 1.66
COL6A2-208ENST00000485591 TCIRG1Q13488 830 aa25.41■■□□□ 1.66
COL6A2-208ENST00000485591 BICDL1Q6ZP65 573 aa25.41■■□□□ 1.66
COL6A2-208ENST00000485591 ZNF34Q8IZ26 560 aa25.41■■□□□ 1.66
COL6A2-208ENST00000485591 SETDB2Q96T68 719 aa25.41■■□□□ 1.66
COL6A2-208ENST00000485591 NIP7Q9Y221 180 aaKnown RBP eCLIP25.41■■□□□ 1.66
COL6A2-208ENST00000485591 MAP3K2Q9Y2U5 619 aa25.41■■□□□ 1.66
COL6A2-208ENST00000485591 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
COL6A2-208ENST00000485591 KIF16BQ96L93 1317 aa25.4■■□□□ 1.66
COL6A2-208ENST00000485591 METTL22Q9BUU2 404 aaPredicted RBP25.39■■□□□ 1.66
COL6A2-208ENST00000485591 UBN2Q6ZU65 1347 aa25.38■■□□□ 1.65
COL6A2-208ENST00000485591 IBTKQ9P2D0 1353 aaPredicted RBP25.38■■□□□ 1.65
COL6A2-208ENST00000485591 BCAR3O75815 825 aa25.37■■□□□ 1.65
COL6A2-208ENST00000485591 GPTP24298 496 aa25.37■■□□□ 1.65
COL6A2-208ENST00000485591 PARP10Q53GL7 1025 aa25.37■■□□□ 1.65
COL6A2-208ENST00000485591 DNAAF4Q8WXU2 420 aa25.37■■□□□ 1.65
COL6A2-208ENST00000485591 ISCA1Q9BUE6 129 aa25.37■■□□□ 1.65
COL6A2-208ENST00000485591 PXDNLA1KZ92 1463 aa25.36■■□□□ 1.65
COL6A2-208ENST00000485591 SERPINB2P05120 415 aa25.36■■□□□ 1.65
COL6A2-208ENST00000485591 MYD88Q99836 296 aa25.36■■□□□ 1.65
COL6A2-208ENST00000485591 ANKRD31Q8N7Z5 1873 aa25.35■■□□□ 1.65
COL6A2-208ENST00000485591 TRIM28Q13263 835 aaKnown RBP25.35■■□□□ 1.65
COL6A2-208ENST00000485591 RCAN3Q9UKA8 241 aa25.35■■□□□ 1.65
COL6A2-208ENST00000485591 NOB1Q9ULX3 412 aaKnown RBP25.35■■□□□ 1.65
COL6A2-208ENST00000485591 C10orf71Q711Q0 1435 aa25.35■■□□□ 1.65
COL6A2-208ENST00000485591 F6X3S4 739 aa25.34■■□□□ 1.65
COL6A2-208ENST00000485591 NEXNQ0ZGT2 675 aa25.34■■□□□ 1.65
COL6A2-208ENST00000485591 NLRP10Q86W26 655 aa25.34■■□□□ 1.65
COL6A2-208ENST00000485591 ARHGAP45Q92619 1136 aa25.34■■□□□ 1.65
COL6A2-208ENST00000485591 ATP5J2-PTCD1G3V325 749 aa25.33■■□□□ 1.65
COL6A2-208ENST00000485591 NBPF5PQ86XG9 351 aaPredicted RBP25.33■■□□□ 1.65
COL6A2-208ENST00000485591 LAMB2P55268 1798 aa25.33■■□□□ 1.65
COL6A2-208ENST00000485591 SUSD4Q5VX71 490 aa25.32■■□□□ 1.64
COL6A2-208ENST00000485591 PPP1R42Q7Z4L9 355 aa25.32■■□□□ 1.64
COL6A2-208ENST00000485591 CNBD1Q8NA66 436 aa25.32■■□□□ 1.64
COL6A2-208ENST00000485591 API5Q9BZZ5 524 aaKnown RBP25.32■■□□□ 1.64
COL6A2-208ENST00000485591 NYXQ9GZU5 481 aa25.32■■□□□ 1.64
COL6A2-208ENST00000485591 PPP1R1BQ9UD71 204 aaPredicted RBP25.32■■□□□ 1.64
COL6A2-208ENST00000485591 KIAA1551Q9HCM1 1747 aa25.32■■□□□ 1.64
COL6A2-208ENST00000485591 IPO8O15397 1037 aaKnown RBP25.31■■□□□ 1.64
COL6A2-208ENST00000485591 NTSR2O95665 410 aa25.31■■□□□ 1.64
COL6A2-208ENST00000485591 IGKV5-2P06315 115 aa25.31■■□□□ 1.64
COL6A2-208ENST00000485591 PRR5LQ6MZQ0 368 aa25.31■■□□□ 1.64
COL6A2-208ENST00000485591 TPTE2Q6XPS3 522 aa25.31■■□□□ 1.64
COL6A2-208ENST00000485591 CCDC191Q8NCU4 936 aa25.31■■□□□ 1.64
COL6A2-208ENST00000485591 LINS1Q8NG48 757 aa25.31■■□□□ 1.64
COL6A2-208ENST00000485591 RNF123Q5XPI4 1314 aa25.31■■□□□ 1.64
COL6A2-208ENST00000485591 DDX60Q8IY21 1712 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms