RNA–Protein interactions for RNA: ENST00000485499.1

PTPRT-208, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 3

Gene PTPRT, Length 208 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-208ENST00000485499 KNDC1Q76NI1 1749 aa9.31□□□□□ -0.92
PTPRT-208ENST00000485499 PTPRNQ16849 979 aa9.31□□□□□ -0.92
PTPRT-208ENST00000485499 ZNF784Q8NCA9 323 aaPredicted RBP9.31□□□□□ -0.92
PTPRT-208ENST00000485499 PPP1R1BQ9UD71 204 aaPredicted RBP9.31□□□□□ -0.92
PTPRT-208ENST00000485499 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
PTPRT-208ENST00000485499 FAM181BA6NEQ2 426 aa9.3□□□□□ -0.92
PTPRT-208ENST00000485499 CFAP99D6REC4 459 aa9.3□□□□□ -0.92
PTPRT-208ENST00000485499 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
PTPRT-208ENST00000485499 ANKRD50Q9ULJ7 1429 aa9.3□□□□□ -0.92
PTPRT-208ENST00000485499 ROBO2Q9HCK4 1378 aa9.29□□□□□ -0.92
PTPRT-208ENST00000485499 C1QTNF8P60827 252 aa9.29□□□□□ -0.92
PTPRT-208ENST00000485499 VPS72Q15906 364 aa9.29□□□□□ -0.92
PTPRT-208ENST00000485499 EZH2Q15910 746 aaKnown RBP9.29□□□□□ -0.92
PTPRT-208ENST00000485499 RTL5Q5HYW3 569 aaPredicted RBP9.29□□□□□ -0.92
PTPRT-208ENST00000485499 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
PTPRT-208ENST00000485499 RPIAP49247 311 aa9.28□□□□□ -0.92
PTPRT-208ENST00000485499 FOXC1Q12948 553 aa9.28□□□□□ -0.92
PTPRT-208ENST00000485499 FAM182BQ5T319 152 aa9.28□□□□□ -0.92
PTPRT-208ENST00000485499 LYPD8Q6UX82 237 aa9.28□□□□□ -0.92
PTPRT-208ENST00000485499 NUDT12Q9BQG2 462 aa9.28□□□□□ -0.92
PTPRT-208ENST00000485499 ALS2Q96Q42 1657 aa9.27□□□□□ -0.93
PTPRT-208ENST00000485499 CCNYL3P0C7X3 344 aa9.27□□□□□ -0.93
PTPRT-208ENST00000485499 ESCO1Q5FWF5 840 aa9.27□□□□□ -0.93
PTPRT-208ENST00000485499 AKAP12Q02952 1782 aa9.27□□□□□ -0.93
PTPRT-208ENST00000485499 LRPPRCP42704 1394 aaKnown RBP9.26□□□□□ -0.93
PTPRT-208ENST00000485499 HFM1A2PYH4 1435 aa9.26□□□□□ -0.93
PTPRT-208ENST00000485499 CCDC144AA2RUR9 1427 aa9.26□□□□□ -0.93
PTPRT-208ENST00000485499 PRAG1Q86YV5 1406 aa9.26□□□□□ -0.93
PTPRT-208ENST00000485499 VPS8Q8N3P4 1428 aa9.26□□□□□ -0.93
PTPRT-208ENST00000485499 ZBTB24O43167 697 aaPredicted RBP9.26□□□□□ -0.93
PTPRT-208ENST00000485499 FOXO3O43524 673 aa9.26□□□□□ -0.93
PTPRT-208ENST00000485499 KANK4Q5T7N3 995 aaPredicted RBP9.26□□□□□ -0.93
PTPRT-208ENST00000485499 EVA1BQ9NVM1 165 aa9.26□□□□□ -0.93
PTPRT-208ENST00000485499 PARD3Q8TEW0 1356 aa9.25□□□□□ -0.93
PTPRT-208ENST00000485499 TNS3Q68CZ2 1445 aa9.25□□□□□ -0.93
PTPRT-208ENST00000485499 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
PTPRT-208ENST00000485499 ZNF326Q5BKZ1 582 aaKnown RBP9.25□□□□□ -0.93
PTPRT-208ENST00000485499 SHANK3Q9BYB0 1731 aa9.25□□□□□ -0.93
PTPRT-208ENST00000485499 WNK3Q9BYP7 1800 aa9.24□□□□□ -0.93
PTPRT-208ENST00000485499 PHRF1Q9P1Y6 1649 aaKnown RBP9.24□□□□□ -0.93
PTPRT-208ENST00000485499 CD2BP2O95400 341 aaKnown RBP9.24□□□□□ -0.93
PTPRT-208ENST00000485499 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
PTPRT-208ENST00000485499 CCDC24Q8N4L8 307 aa9.24□□□□□ -0.93
PTPRT-208ENST00000485499 TSC1Q92574 1164 aa9.24□□□□□ -0.93
PTPRT-208ENST00000485499 SPON1Q9HCB6 807 aa9.24□□□□□ -0.93
PTPRT-208ENST00000485499 SPATA31A3Q5VYP0 1347 aa9.24□□□□□ -0.93
PTPRT-208ENST00000485499 NAIPQ13075 1403 aa9.23□□□□□ -0.93
PTPRT-208ENST00000485499 DLC1Q96QB1 1528 aa9.23□□□□□ -0.93
PTPRT-208ENST00000485499 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
PTPRT-208ENST00000485499 RFC5P40937 340 aa9.23□□□□□ -0.93
PTPRT-208ENST00000485499 TMEM132AQ24JP5 1023 aa9.23□□□□□ -0.93
PTPRT-208ENST00000485499 CYP4X1Q8N118 509 aa9.23□□□□□ -0.93
PTPRT-208ENST00000485499 PARP4Q9UKK3 1724 aaKnown RBP9.22□□□□□ -0.93
PTPRT-208ENST00000485499 TRIM37O94972 964 aa9.22□□□□□ -0.93
PTPRT-208ENST00000485499 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
PTPRT-208ENST00000485499 KCNH2Q12809 1159 aa9.22□□□□□ -0.93
PTPRT-208ENST00000485499 CAMKK2Q96RR4 588 aa9.22□□□□□ -0.93
PTPRT-208ENST00000485499 KCNQ2O43526 872 aa9.21□□□□□ -0.94
PTPRT-208ENST00000485499 TRIM47Q96LD4 638 aa9.21□□□□□ -0.94
PTPRT-208ENST00000485499 GOLGB1Q14789 3259 aaKnown RBP9.21□□□□□ -0.94
PTPRT-208ENST00000485499 PER1O15534 1290 aaPredicted RBP9.2□□□□□ -0.94
PTPRT-208ENST00000485499 APBA3O96018 575 aa9.2□□□□□ -0.94
PTPRT-208ENST00000485499 F12P00748 615 aaPredicted RBP9.2□□□□□ -0.94
PTPRT-208ENST00000485499 CTDSPL2Q05D32 466 aa9.2□□□□□ -0.94
PTPRT-208ENST00000485499 TRIM32Q13049 653 aa9.2□□□□□ -0.94
PTPRT-208ENST00000485499 SENP2Q9HC62 589 aa9.2□□□□□ -0.94
PTPRT-208ENST00000485499 ATP13A2Q9NQ11 1180 aa9.2□□□□□ -0.94
PTPRT-208ENST00000485499 TOPAZ1Q8N9V7 1692 aa9.2□□□□□ -0.94
PTPRT-208ENST00000485499 PEAK1Q9H792 1746 aa9.19□□□□□ -0.94
PTPRT-208ENST00000485499 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
PTPRT-208ENST00000485499 AP1G2O75843 785 aa9.19□□□□□ -0.94
PTPRT-208ENST00000485499 CTHP32929 405 aa9.19□□□□□ -0.94
PTPRT-208ENST00000485499 NBPF8Q3BBV2 869 aa9.19□□□□□ -0.94
PTPRT-208ENST00000485499 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
PTPRT-208ENST00000485499 RRBP1Q9P2E9 1410 aaKnown RBP9.19□□□□□ -0.94
PTPRT-208ENST00000485499 ITSN1Q15811 1721 aa9.18□□□□□ -0.94
PTPRT-208ENST00000485499 BANK1Q8NDB2 785 aa9.18□□□□□ -0.94
PTPRT-208ENST00000485499 UNC93B1Q9H1C4 597 aa9.18□□□□□ -0.94
PTPRT-208ENST00000485499 LRRC37A3O60309 1634 aa9.17□□□□□ -0.94
PTPRT-208ENST00000485499 ARHGEF10O15013 1369 aa9.17□□□□□ -0.94
PTPRT-208ENST00000485499 WNT7BP56706 349 aa9.17□□□□□ -0.94
PTPRT-208ENST00000485499 PTCRAQ6ISU1 281 aaPredicted RBP9.17□□□□□ -0.94
PTPRT-208ENST00000485499 ZSCAN1Q8NBB4 408 aa9.17□□□□□ -0.94
PTPRT-208ENST00000485499 BTG4Q9NY30 223 aa9.17□□□□□ -0.94
PTPRT-208ENST00000485499 NRXN1Q9ULB1 1477 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 KAT6BQ8WYB5 2073 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 SPATA31A5Q5VU36 1347 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 SPATA31A7Q8IWB4 1347 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 FAM83GA6ND36 823 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 FAM196AQ6ZSG2 479 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 KRT28Q7Z3Y7 464 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 ARMC2Q8NEN0 867 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 TUBGCP6Q96RT7 1819 aa9.16□□□□□ -0.94
PTPRT-208ENST00000485499 NUP155O75694 1391 aa9.15□□□□□ -0.94
PTPRT-208ENST00000485499 USP17L8P0C7I0 530 aa9.15□□□□□ -0.94
PTPRT-208ENST00000485499 MAP10Q9P2G4 905 aa9.15□□□□□ -0.94
PTPRT-208ENST00000485499 SBNO1A3KN83 1393 aa9.14□□□□□ -0.95
PTPRT-208ENST00000485499 SLC16A10Q8TF71 515 aa9.14□□□□□ -0.95
PTPRT-208ENST00000485499 LRRN4Q8WUT4 740 aa9.14□□□□□ -0.95
PTPRT-208ENST00000485499 KIFC2Q96AC6 838 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms