RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 TNS4Q8IZW8 715 aa15.96■□□□□ 0.15
LDLRAP1-206ENST00000485476 C7orf43Q8WVR3 580 aa15.96■□□□□ 0.15
LDLRAP1-206ENST00000485476 RTF1Q92541 710 aaKnown RBP15.96■□□□□ 0.15
LDLRAP1-206ENST00000485476 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
LDLRAP1-206ENST00000485476 ZNF330Q9Y3S2 320 aaPredicted RBP15.96■□□□□ 0.15
LDLRAP1-206ENST00000485476 NPR1P16066 1061 aa15.95■□□□□ 0.14
LDLRAP1-206ENST00000485476 NBPF5PQ86XG9 351 aaPredicted RBP15.95■□□□□ 0.14
LDLRAP1-206ENST00000485476 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
LDLRAP1-206ENST00000485476 SCN7AQ01118 1682 aa15.95■□□□□ 0.14
LDLRAP1-206ENST00000485476 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
LDLRAP1-206ENST00000485476 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
LDLRAP1-206ENST00000485476 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
LDLRAP1-206ENST00000485476 CCDC93Q567U6 631 aa15.94■□□□□ 0.14
LDLRAP1-206ENST00000485476 RTKN2Q8IZC4 609 aa15.94■□□□□ 0.14
LDLRAP1-206ENST00000485476 USP16Q9Y5T5 823 aa15.94■□□□□ 0.14
LDLRAP1-206ENST00000485476 PCNTO95613 3336 aa15.94■□□□□ 0.14
LDLRAP1-206ENST00000485476 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
LDLRAP1-206ENST00000485476 LDHDQ86WU2 507 aa15.93■□□□□ 0.14
LDLRAP1-206ENST00000485476 SIPA1L3O60292 1781 aaPredicted RBP15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 KCNQ3O43525 872 aa15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 ALDH1B1P30837 517 aa15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 GRIPAP1Q4V328 841 aa15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 FER1L6Q2WGJ9 1857 aa15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 ANKRD31Q8N7Z5 1873 aa15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 DICER1Q9UPY3 1922 aaKnown RBP15.92■□□□□ 0.14
LDLRAP1-206ENST00000485476 TIAM2Q8IVF5 1701 aa15.91■□□□□ 0.14
LDLRAP1-206ENST00000485476 DDNO94850 711 aaPredicted RBP15.91■□□□□ 0.14
LDLRAP1-206ENST00000485476 CC2D2BQ6DHV5 1058 aa15.91■□□□□ 0.14
LDLRAP1-206ENST00000485476 TAF7Q15545 349 aaPredicted RBP15.9■□□□□ 0.14
LDLRAP1-206ENST00000485476 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
LDLRAP1-206ENST00000485476 PNISRQ8TF01 805 aaKnown RBP15.9■□□□□ 0.14
LDLRAP1-206ENST00000485476 TAF1DQ9H5J8 278 aaPredicted RBP15.9■□□□□ 0.14
LDLRAP1-206ENST00000485476 PASKQ96RG2 1323 aa15.9■□□□□ 0.14
LDLRAP1-206ENST00000485476 ERVV-1B6SEH8 477 aa15.89■□□□□ 0.13
LDLRAP1-206ENST00000485476 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
LDLRAP1-206ENST00000485476 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
LDLRAP1-206ENST00000485476 PNMA8AQ86V59 439 aaPredicted RBP15.89■□□□□ 0.13
LDLRAP1-206ENST00000485476 NYXQ9GZU5 481 aa15.89■□□□□ 0.13
LDLRAP1-206ENST00000485476 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
LDLRAP1-206ENST00000485476 PSMD1Q99460 953 aa15.88■□□□□ 0.13
LDLRAP1-206ENST00000485476 CCDC88AQ3V6T2 1871 aa15.88■□□□□ 0.13
LDLRAP1-206ENST00000485476 CNTNAP1P78357 1384 aa15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 NBPF26B4DH59 902 aa15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 FZD9O00144 591 aa15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 NBPF10Q6P3W6 841 aaKnown RBP15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 MCM10Q7L590 875 aa15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 NBPF15Q8N660 670 aa15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 PRDM10Q9NQV6 1147 aa15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 SLX4Q8IY92 1834 aa15.87■□□□□ 0.13
LDLRAP1-206ENST00000485476 COL11A2P13942 1736 aaPredicted RBP15.86■□□□□ 0.13
LDLRAP1-206ENST00000485476 BCORQ6W2J9 1755 aa15.86■□□□□ 0.13
LDLRAP1-206ENST00000485476 ARFGEF2Q9Y6D5 1785 aa15.86■□□□□ 0.13
LDLRAP1-206ENST00000485476 TMEM88BA6NKF7 163 aa15.86■□□□□ 0.13
LDLRAP1-206ENST00000485476 ITGBL1O95965 494 aaPredicted RBP15.86■□□□□ 0.13
LDLRAP1-206ENST00000485476 NEFMP07197 916 aa15.86■□□□□ 0.13
LDLRAP1-206ENST00000485476 PPP2R1AP30153 589 aa15.86■□□□□ 0.13
LDLRAP1-206ENST00000485476 CRY2Q49AN0 593 aa15.86■□□□□ 0.13
LDLRAP1-206ENST00000485476 SCN4AP35499 1836 aa15.85■□□□□ 0.13
LDLRAP1-206ENST00000485476 PRAMEF22A3QJZ6 481 aa15.85■□□□□ 0.13
LDLRAP1-206ENST00000485476 GTF2E1P29083 439 aaPredicted RBP15.85■□□□□ 0.13
LDLRAP1-206ENST00000485476 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
LDLRAP1-206ENST00000485476 IARSP41252 1262 aaKnown RBP15.85■□□□□ 0.13
LDLRAP1-206ENST00000485476 GPC2Q8N158 579 aa15.85■□□□□ 0.13
LDLRAP1-206ENST00000485476 IBTKQ9P2D0 1353 aaPredicted RBP15.85■□□□□ 0.13
LDLRAP1-206ENST00000485476 POTEIP0CG38 1075 aa15.84■□□□□ 0.13
LDLRAP1-206ENST00000485476 POTEJP0CG39 1038 aa15.84■□□□□ 0.13
LDLRAP1-206ENST00000485476 SYNE4Q8N205 404 aa15.84■□□□□ 0.13
LDLRAP1-206ENST00000485476 JDP2Q8WYK2 163 aa15.84■□□□□ 0.13
LDLRAP1-206ENST00000485476 ZNF277Q9NRM2 450 aaPredicted RBP15.84■□□□□ 0.13
LDLRAP1-206ENST00000485476 MKRN1Q9UHC7 482 aaKnown RBP15.84■□□□□ 0.13
LDLRAP1-206ENST00000485476 RIC1Q4ADV7 1423 aa15.84■□□□□ 0.13
LDLRAP1-206ENST00000485476 EPHX2P34913 555 aa15.83■□□□□ 0.12
LDLRAP1-206ENST00000485476 CTCFP49711 727 aaPredicted RBP15.83■□□□□ 0.12
LDLRAP1-206ENST00000485476 VPS33BQ9H267 617 aa15.83■□□□□ 0.12
LDLRAP1-206ENST00000485476 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
LDLRAP1-206ENST00000485476 PIP4K2AP48426 406 aaPredicted RBP15.82■□□□□ 0.12
LDLRAP1-206ENST00000485476 HLFQ16534 295 aa15.82■□□□□ 0.12
LDLRAP1-206ENST00000485476 AIDAQ96BJ3 306 aa15.82■□□□□ 0.12
LDLRAP1-206ENST00000485476 ERBB4Q15303 1308 aa15.82■□□□□ 0.12
LDLRAP1-206ENST00000485476 MAP3K15Q6ZN16 1313 aa15.82■□□□□ 0.12
LDLRAP1-206ENST00000485476 RASSF10A6NK89 507 aa15.81■□□□□ 0.12
LDLRAP1-206ENST00000485476 CRAMP1Q96RY5 1269 aa15.81■□□□□ 0.12
LDLRAP1-206ENST00000485476 ZNF541Q9H0D2 1346 aa15.81■□□□□ 0.12
LDLRAP1-206ENST00000485476 SNED1Q8TER0 1413 aa15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 VEGFBP49765 207 aa15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 EIF6P56537 245 aaKnown RBP15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 DCTN1Q14203 1278 aa15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 EAPPQ56P03 285 aaPredicted RBP15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 KIF6Q6ZMV9 814 aa15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 CNTROBQ8N137 903 aa15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 WBP1LQ9NX94 342 aa15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
LDLRAP1-206ENST00000485476 FOXN1O15353 648 aa15.79■□□□□ 0.12
LDLRAP1-206ENST00000485476 CAPN15O75808 1086 aa15.79■□□□□ 0.12
LDLRAP1-206ENST00000485476 EIF4A1P60842 406 aaKnown RBP15.79■□□□□ 0.12
LDLRAP1-206ENST00000485476 DEFB115Q30KQ5 88 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms