RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PTGER2P43116 358 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 RALBP1Q15311 655 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 TMC1Q8TDI8 760 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 ARFGEF2Q9Y6D5 1785 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 ERVV-2B6SEH9 535 aa6.91□□□□□ -1.3
CCDC39-205ENST00000485055 PPP1R37O75864 691 aa6.91□□□□□ -1.3
CCDC39-205ENST00000485055 FLAD1Q8NFF5 587 aa6.91□□□□□ -1.3
CCDC39-205ENST00000485055 GIPC2Q8TF65 315 aa6.91□□□□□ -1.3
CCDC39-205ENST00000485055 SMARCC1Q92922 1105 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-205ENST00000485055 USTQ9Y2C2 406 aa6.91□□□□□ -1.3
CCDC39-205ENST00000485055 MTFR1LQ9H019 292 aa6.91□□□□□ -1.3
CCDC39-205ENST00000485055 CSB-PGBD3P0DP91 1061 aa6.9□□□□□ -1.3
CCDC39-205ENST00000485055 GSE1Q14687 1217 aa6.9□□□□□ -1.3
CCDC39-205ENST00000485055 DCAF8Q5TAQ9 597 aa6.9□□□□□ -1.3
CCDC39-205ENST00000485055 PROCA1Q8NCQ7 364 aaPredicted RBP6.9□□□□□ -1.3
CCDC39-205ENST00000485055 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.3
CCDC39-205ENST00000485055 SPON1Q9HCB6 807 aa6.9□□□□□ -1.3
CCDC39-205ENST00000485055 GDPD2Q9HCC8 539 aa6.9□□□□□ -1.3
CCDC39-205ENST00000485055 BCORQ6W2J9 1755 aa6.9□□□□□ -1.3
CCDC39-205ENST00000485055 TATP17735 454 aaPredicted RBP6.9□□□□□ -1.3
CCDC39-205ENST00000485055 AMPHP49418 695 aa6.9□□□□□ -1.3
CCDC39-205ENST00000485055 FOXD4Q12950 439 aaPredicted RBP6.9□□□□□ -1.3
CCDC39-205ENST00000485055 TTLL12Q14166 644 aaPredicted RBP6.9□□□□□ -1.3
CCDC39-205ENST00000485055 AMOTQ4VCS5 1084 aa6.9□□□□□ -1.3
CCDC39-205ENST00000485055 RC3H1Q5TC82 1133 aaKnown RBP6.9□□□□□ -1.3
CCDC39-205ENST00000485055 LAMB4A4D0S4 1761 aa6.9□□□□□ -1.31
CCDC39-205ENST00000485055 HSP90AB1P08238 724 aaKnown RBP6.9□□□□□ -1.31
CCDC39-205ENST00000485055 BCL2L13Q9BXK5 485 aa6.9□□□□□ -1.31
CCDC39-205ENST00000485055 NLRP2Q9NX02 1062 aa6.9□□□□□ -1.31
CCDC39-205ENST00000485055 STK32BQ9NY57 414 aa6.9□□□□□ -1.31
CCDC39-205ENST00000485055 SPG7Q9UQ90 795 aa6.9□□□□□ -1.31
CCDC39-205ENST00000485055 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
CCDC39-205ENST00000485055 AMHR2Q16671 573 aa6.89□□□□□ -1.31
CCDC39-205ENST00000485055 SCN7AQ01118 1682 aa6.89□□□□□ -1.31
CCDC39-205ENST00000485055 KCPQ6ZWJ8 1503 aa6.89□□□□□ -1.31
CCDC39-205ENST00000485055 KIF7Q2M1P5 1343 aa6.89□□□□□ -1.31
CCDC39-205ENST00000485055 REPIN1Q9BWE0 567 aaKnown RBP6.89□□□□□ -1.31
CCDC39-205ENST00000485055 GABBR1Q9UBS5 961 aa6.89□□□□□ -1.31
CCDC39-205ENST00000485055 KDM3BQ7LBC6 1761 aa6.89□□□□□ -1.31
CCDC39-205ENST00000485055 KDM6AO15550 1401 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-205ENST00000485055 MCCP23508 829 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 IL13P35225 146 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 TAGLNQ01995 201 aaKnown RBP6.88□□□□□ -1.31
CCDC39-205ENST00000485055 GGNBP2Q9H3C7 697 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 EP400Q96L91 3159 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 CYP27B1O15528 508 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 PAX3P23760 479 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 EIF4A2Q14240 407 aaKnown RBP6.88□□□□□ -1.31
CCDC39-205ENST00000485055 R3HDM1Q15032 1099 aaKnown RBP6.88□□□□□ -1.31
CCDC39-205ENST00000485055 HSP90AB2PQ58FF8 381 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 EYA1Q99502 592 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 VRTNQ9H8Y1 702 aa6.88□□□□□ -1.31
CCDC39-205ENST00000485055 PNPLA7Q6ZV29 1317 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 PHKG2P15735 406 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 OXER1Q8TDS5 423 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 RAPGEF4Q8WZA2 1011 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 PMM1Q92871 262 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 PANK3Q9H999 370 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 LRRC4BQ9NT99 713 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 CNTNAP4Q9C0A0 1308 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 NUBP1P53384 320 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 LARGE2Q8N3Y3 721 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 PNMA2Q9UL42 364 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 MYH14Q7Z406 1995 aaKnown RBP6.87□□□□□ -1.31
CCDC39-205ENST00000485055 CHRM1P11229 460 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-205ENST00000485055 PTF1AQ7RTS3 328 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 IFNL2Q8IZJ0 200 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 MORC4Q8TE76 937 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 DCAF5Q96JK2 942 aa6.87□□□□□ -1.31
CCDC39-205ENST00000485055 ZBTB47Q9UFB7 747 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-205ENST00000485055 TMEM88BA6NKF7 163 aa6.86□□□□□ -1.31
CCDC39-205ENST00000485055 SSFA2P28290 1259 aa6.86□□□□□ -1.31
CCDC39-205ENST00000485055 FAM182BQ5T319 152 aa6.86□□□□□ -1.31
CCDC39-205ENST00000485055 TBC1D2Q9BYX2 928 aa6.86□□□□□ -1.31
CCDC39-205ENST00000485055 EMILIN1Q9Y6C2 1016 aa6.86□□□□□ -1.31
CCDC39-205ENST00000485055 RRS1Q15050 365 aaKnown RBP6.86□□□□□ -1.31
CCDC39-205ENST00000485055 GIGYF2Q6Y7W6 1299 aaKnown RBP6.86□□□□□ -1.31
CCDC39-205ENST00000485055 DLG5Q8TDM6 1919 aa6.85□□□□□ -1.31
CCDC39-205ENST00000485055 A0A0G2JS52 829 aa6.85□□□□□ -1.31
CCDC39-205ENST00000485055 FECHP22830 423 aa6.85□□□□□ -1.31
CCDC39-205ENST00000485055 ZNF827Q17R98 1081 aa6.85□□□□□ -1.31
CCDC39-205ENST00000485055 RPS6KL1Q9Y6S9 549 aa6.85□□□□□ -1.31
CCDC39-205ENST00000485055 CEMIPQ8WUJ3 1361 aa6.85□□□□□ -1.31
CCDC39-205ENST00000485055 PALLDQ8WX93 1383 aa6.85□□□□□ -1.31
CCDC39-205ENST00000485055 PLEKHO1Q53GL0 409 aaPredicted RBP6.85□□□□□ -1.31
CCDC39-205ENST00000485055 CD2APQ9Y5K6 639 aa6.85□□□□□ -1.31
CCDC39-205ENST00000485055 IRF6O14896 467 aa6.84□□□□□ -1.31
CCDC39-205ENST00000485055 HTATSF1O43719 755 aaKnown RBP6.84□□□□□ -1.31
CCDC39-205ENST00000485055 CREB3O43889 395 aa6.84□□□□□ -1.31
CCDC39-205ENST00000485055 ADAMTS19Q8TE59 1207 aa6.84□□□□□ -1.31
CCDC39-205ENST00000485055 LNPKQ9C0E8 428 aa6.84□□□□□ -1.31
CCDC39-205ENST00000485055 PRIM1P49642 420 aaKnown RBP6.84□□□□□ -1.31
CCDC39-205ENST00000485055 C9orf131Q5VYM1 1079 aa6.84□□□□□ -1.31
CCDC39-205ENST00000485055 LARP6Q9BRS8 491 aaKnown RBP6.84□□□□□ -1.31
CCDC39-205ENST00000485055 MFRPQ9BY79 579 aa6.84□□□□□ -1.31
CCDC39-205ENST00000485055 NAP1L2Q9ULW6 460 aaPredicted RBP6.84□□□□□ -1.31
CCDC39-205ENST00000485055 AFDNP55196 1824 aaKnown RBP6.84□□□□□ -1.31
CCDC39-205ENST00000485055 CCDC194A0A1B0GVG4 234 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 SPDYE2BA6NHP3 402 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 SPDYE5A6NIY4 337 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms