RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 HCN4Q9Y3Q4 1203 aa5.99□□□□□ -1.45
SGIP1-211ENST00000484988 KHNYNO15037 678 aaKnown RBP5.98□□□□□ -1.45
SGIP1-211ENST00000484988 EFSO43281 561 aa5.98□□□□□ -1.45
SGIP1-211ENST00000484988 OIP5O43482 229 aa5.98□□□□□ -1.45
SGIP1-211ENST00000484988 BMP4P12644 408 aa5.98□□□□□ -1.45
SGIP1-211ENST00000484988 C1orf229Q6ZS94 237 aaPredicted RBP5.98□□□□□ -1.45
SGIP1-211ENST00000484988 PHACTR1Q9C0D0 580 aa5.98□□□□□ -1.45
SGIP1-211ENST00000484988 ENAMQ9NRM1 1142 aa5.98□□□□□ -1.45
SGIP1-211ENST00000484988 CHMP3Q9Y3E7 222 aa5.98□□□□□ -1.45
SGIP1-211ENST00000484988 GJA3Q9Y6H8 435 aa5.98□□□□□ -1.45
SGIP1-211ENST00000484988 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 DCDC2BA2VCK2 349 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 IGFBP4P22692 258 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 LAMC2Q13753 1193 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 LRRC69Q6ZNQ3 347 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 FAM200AQ8TCP9 573 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 RHPN1Q8TCX5 695 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 STRN4Q9NRL3 753 aa5.97□□□□□ -1.45
SGIP1-211ENST00000484988 GDF2Q9UK05 429 aaPredicted RBP5.97□□□□□ -1.45
SGIP1-211ENST00000484988 LGR5O75473 907 aa5.96□□□□□ -1.46
SGIP1-211ENST00000484988 ARAFP10398 606 aa5.96□□□□□ -1.46
SGIP1-211ENST00000484988 CD33P20138 364 aa5.96□□□□□ -1.46
SGIP1-211ENST00000484988 WEE1P30291 646 aa5.96□□□□□ -1.46
SGIP1-211ENST00000484988 MARSP56192 900 aaKnown RBP5.96□□□□□ -1.46
SGIP1-211ENST00000484988 ELOAQ14241 798 aaKnown RBP5.96□□□□□ -1.46
SGIP1-211ENST00000484988 ALDH16A1Q8IZ83 802 aa5.96□□□□□ -1.46
SGIP1-211ENST00000484988 GOLGA6L1Q8N7Z2 621 aa5.96□□□□□ -1.46
SGIP1-211ENST00000484988 SLCO4C1Q6ZQN7 724 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 GALNT6Q8NCL4 622 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 CHMP7Q8WUX9 453 aaPredicted RBP5.95□□□□□ -1.46
SGIP1-211ENST00000484988 EDARADDQ8WWZ3 215 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 SUSD3Q96L08 255 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 NEUROD4Q9HD90 331 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 AVENQ9NQS1 362 aaPredicted RBP5.95□□□□□ -1.46
SGIP1-211ENST00000484988 MARK1Q9P0L2 795 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 ANKIB1Q9P2G1 1089 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 KLF15Q9UIH9 416 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 GGA1Q9UJY5 639 aa5.95□□□□□ -1.46
SGIP1-211ENST00000484988 NOVA2Q9UNW9 492 aaKnown RBP5.95□□□□□ -1.46
SGIP1-211ENST00000484988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.94□□□□□ -1.46
SGIP1-211ENST00000484988 SHISA8B8ZZ34 492 aa5.94□□□□□ -1.46
SGIP1-211ENST00000484988 ATG7O95352 703 aa5.94□□□□□ -1.46
SGIP1-211ENST00000484988 FAM69CQ0P6D2 419 aa5.94□□□□□ -1.46
SGIP1-211ENST00000484988 ZNF280CQ8ND82 737 aa5.94□□□□□ -1.46
SGIP1-211ENST00000484988 NEDD1Q8NHV4 660 aa5.94□□□□□ -1.46
SGIP1-211ENST00000484988 SCARF2Q96GP6 870 aaPredicted RBP5.94□□□□□ -1.46
SGIP1-211ENST00000484988 HSH2DQ96JZ2 352 aa5.94□□□□□ -1.46
SGIP1-211ENST00000484988 SERPINA10Q9UK55 444 aa5.94□□□□□ -1.46
SGIP1-211ENST00000484988 ZMIZ1Q9ULJ6 1067 aa5.94□□□□□ -1.46
SGIP1-211ENST00000484988 ARID3CA6NKF2 412 aa5.93□□□□□ -1.46
SGIP1-211ENST00000484988 RNF225M0QZC1 329 aaPredicted RBP5.93□□□□□ -1.46
SGIP1-211ENST00000484988 FOXO3O43524 673 aa5.93□□□□□ -1.46
SGIP1-211ENST00000484988 KCNQ4P56696 695 aa5.93□□□□□ -1.46
SGIP1-211ENST00000484988 RASSF7Q02833 373 aa5.93□□□□□ -1.46
SGIP1-211ENST00000484988 SFSWAPQ12872 951 aaKnown RBP5.93□□□□□ -1.46
SGIP1-211ENST00000484988 RTN1Q16799 776 aa5.93□□□□□ -1.46
SGIP1-211ENST00000484988 DNMT3AQ9Y6K1 912 aaPredicted RBP5.93□□□□□ -1.46
SGIP1-211ENST00000484988 ACIN1Q9UKV3 1341 aaKnown RBP5.93□□□□□ -1.46
SGIP1-211ENST00000484988 NEURL1BA8MQ27 555 aa5.92□□□□□ -1.46
SGIP1-211ENST00000484988 EPXP11678 715 aa5.92□□□□□ -1.46
SGIP1-211ENST00000484988 HOXB4P17483 251 aaPredicted RBP5.92□□□□□ -1.46
SGIP1-211ENST00000484988 TYRO3Q06418 890 aa5.92□□□□□ -1.46
SGIP1-211ENST00000484988 GRIN2CQ14957 1233 aa5.92□□□□□ -1.46
SGIP1-211ENST00000484988 SWI5Q1ZZU3 235 aa5.92□□□□□ -1.46
SGIP1-211ENST00000484988 ZNF468Q5VIY5 522 aaPredicted RBP5.92□□□□□ -1.46
SGIP1-211ENST00000484988 CCDC97Q96F63 343 aaPredicted RBP5.92□□□□□ -1.46
SGIP1-211ENST00000484988 NGLY1Q96IV0 654 aa5.92□□□□□ -1.46
SGIP1-211ENST00000484988 CEP63Q96MT8 703 aa5.92□□□□□ -1.46
SGIP1-211ENST00000484988 CNTNAP5Q8WYK1 1306 aa5.92□□□□□ -1.46
SGIP1-211ENST00000484988 ADH6P28332 368 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 IRS1P35568 1242 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 SNRPNP63162 240 aaKnown RBP5.91□□□□□ -1.46
SGIP1-211ENST00000484988 HIF1AQ16665 826 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 IER5Q5VY09 327 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 KANK3Q6NY19 840 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 FCHSD1Q86WN1 690 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 BEND7Q8N7W2 519 aaPredicted RBP5.91□□□□□ -1.46
SGIP1-211ENST00000484988 STK32AQ8WU08 396 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 PBXIP1Q96AQ6 731 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 BTBD6Q96KE9 485 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 BRD7Q9NPI1 651 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 DMGDHQ9UI17 866 aaKnown RBP5.91□□□□□ -1.46
SGIP1-211ENST00000484988 PRR12Q9ULL5 1215 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 BCS1LQ9Y276 419 aa5.91□□□□□ -1.46
SGIP1-211ENST00000484988 PCBP4P57723 403 aaKnown RBP5.9□□□□□ -1.46
SGIP1-211ENST00000484988 OCLNQ16625 522 aa5.9□□□□□ -1.46
SGIP1-211ENST00000484988 BTLAQ7Z6A9 289 aa5.9□□□□□ -1.46
SGIP1-211ENST00000484988 TMEM151AQ8N4L1 468 aa5.9□□□□□ -1.46
SGIP1-211ENST00000484988 MYO19Q96H55 970 aa5.9□□□□□ -1.46
SGIP1-211ENST00000484988 SLC30A3Q99726 388 aa5.9□□□□□ -1.46
SGIP1-211ENST00000484988 MDFIQ99750 246 aa5.9□□□□□ -1.46
SGIP1-211ENST00000484988 QTRT2Q9H974 415 aaKnown RBP5.9□□□□□ -1.46
SGIP1-211ENST00000484988 PHF20L1A8MW92 1017 aa5.89□□□□□ -1.47
SGIP1-211ENST00000484988 TGFBR3LH3BV60 316 aa5.89□□□□□ -1.47
SGIP1-211ENST00000484988 SIN3BO75182 1162 aa5.89□□□□□ -1.47
SGIP1-211ENST00000484988 GDF11O95390 407 aa5.89□□□□□ -1.47
SGIP1-211ENST00000484988 FKBP5Q13451 457 aaPredicted RBP5.89□□□□□ -1.47
SGIP1-211ENST00000484988 LINC00114Q6XXX2 140 aa5.89□□□□□ -1.47
SGIP1-211ENST00000484988 PRIMPOLQ96LW4 560 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms