RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 ARTNQ5T4W7 220 aa7.07□□□□□ -1.28
VPS50-216ENST00000484954 TNS4Q8IZW8 715 aa7.07□□□□□ -1.28
VPS50-216ENST00000484954 OGFOD1Q8N543 542 aa7.07□□□□□ -1.28
VPS50-216ENST00000484954 ZNF594Q96JF6 807 aaPredicted RBP7.07□□□□□ -1.28
VPS50-216ENST00000484954 PPP1R12CQ9BZL4 782 aa7.07□□□□□ -1.28
VPS50-216ENST00000484954 TPSG1Q9NRR2 321 aa7.07□□□□□ -1.28
VPS50-216ENST00000484954 PARP3Q9Y6F1 533 aa7.07□□□□□ -1.28
VPS50-216ENST00000484954 CDK2AP1O14519 115 aa7.06□□□□□ -1.28
VPS50-216ENST00000484954 DKK1O94907 266 aa7.06□□□□□ -1.28
VPS50-216ENST00000484954 NKAPLQ5M9Q1 402 aa7.06□□□□□ -1.28
VPS50-216ENST00000484954 CCDC102BQ68D86 513 aa7.06□□□□□ -1.28
VPS50-216ENST00000484954 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
VPS50-216ENST00000484954 ZDHHC1Q8WTX9 485 aa7.06□□□□□ -1.28
VPS50-216ENST00000484954 SCHIP1Q9P0W5 487 aaPredicted RBP7.06□□□□□ -1.28
VPS50-216ENST00000484954 KLF15Q9UIH9 416 aa7.06□□□□□ -1.28
VPS50-216ENST00000484954 DYRK3O43781 588 aa7.05□□□□□ -1.28
VPS50-216ENST00000484954 SPATA31C1P0DKV0 1188 aa7.05□□□□□ -1.28
VPS50-216ENST00000484954 FCHSD1Q86WN1 690 aa7.05□□□□□ -1.28
VPS50-216ENST00000484954 AIDAQ96BJ3 306 aa7.05□□□□□ -1.28
VPS50-216ENST00000484954 NIFKQ9BYG3 293 aaKnown RBP7.05□□□□□ -1.28
VPS50-216ENST00000484954 ZCCHC2Q9C0B9 1178 aaKnown RBP7.05□□□□□ -1.28
VPS50-216ENST00000484954 DNAAF2Q9NVR5 837 aaKnown RBP7.05□□□□□ -1.28
VPS50-216ENST00000484954 DCDC2BA2VCK2 349 aa7.04□□□□□ -1.28
VPS50-216ENST00000484954 SFI1A8K8P3 1242 aa7.04□□□□□ -1.28
VPS50-216ENST00000484954 CD33P20138 364 aa7.04□□□□□ -1.28
VPS50-216ENST00000484954 ADH6P28332 368 aa7.04□□□□□ -1.28
VPS50-216ENST00000484954 SH3PXD2AQ5TCZ1 1133 aa7.04□□□□□ -1.28
VPS50-216ENST00000484954 SLC9A9Q8IVB4 645 aa7.04□□□□□ -1.28
VPS50-216ENST00000484954 KRTAP17-1Q9BYP8 105 aa7.04□□□□□ -1.28
VPS50-216ENST00000484954 CABP1Q9NZU7 370 aa7.04□□□□□ -1.28
VPS50-216ENST00000484954 BACH1O14867 736 aa7.03□□□□□ -1.28
VPS50-216ENST00000484954 TXLNAP40222 546 aa7.03□□□□□ -1.28
VPS50-216ENST00000484954 ATP1A2P50993 1020 aa7.03□□□□□ -1.28
VPS50-216ENST00000484954 PCBP4P57723 403 aaKnown RBP7.03□□□□□ -1.28
VPS50-216ENST00000484954 CRTC2Q53ET0 693 aaPredicted RBP7.03□□□□□ -1.28
VPS50-216ENST00000484954 CFAP70Q5T0N1 1121 aa7.03□□□□□ -1.28
VPS50-216ENST00000484954 KANK4Q5T7N3 995 aaPredicted RBP7.03□□□□□ -1.28
VPS50-216ENST00000484954 LARGE2Q8N3Y3 721 aa7.03□□□□□ -1.28
VPS50-216ENST00000484954 TSEN2Q8NCE0 465 aaKnown RBP7.03□□□□□ -1.28
VPS50-216ENST00000484954 CRISPLD1Q9H336 500 aa7.03□□□□□ -1.28
VPS50-216ENST00000484954 HCN2Q9UL51 889 aa7.03□□□□□ -1.28
VPS50-216ENST00000484954 PCDHGC4Q9Y5F7 938 aa7.03□□□□□ -1.28
VPS50-216ENST00000484954 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
VPS50-216ENST00000484954 LGR5O75473 907 aa7.02□□□□□ -1.29
VPS50-216ENST00000484954 RASA1P20936 1047 aa7.02□□□□□ -1.29
VPS50-216ENST00000484954 LMOD1P29536 600 aaPredicted RBP7.02□□□□□ -1.29
VPS50-216ENST00000484954 PRSS36Q5K4E3 855 aa7.02□□□□□ -1.29
VPS50-216ENST00000484954 FIGNL1Q6PIW4 674 aa7.02□□□□□ -1.29
VPS50-216ENST00000484954 SIX5Q8N196 739 aa7.02□□□□□ -1.29
VPS50-216ENST00000484954 TSPAN10Q9H1Z9 355 aaPredicted RBP7.02□□□□□ -1.29
VPS50-216ENST00000484954 KHNYNO15037 678 aaKnown RBP7.01□□□□□ -1.29
VPS50-216ENST00000484954 ATXN7O15265 892 aaPredicted RBP7.01□□□□□ -1.29
VPS50-216ENST00000484954 APBA3O96018 575 aa7.01□□□□□ -1.29
VPS50-216ENST00000484954 MAPTP10636 758 aaKnown RBP7.01□□□□□ -1.29
VPS50-216ENST00000484954 GAS2L2Q8NHY3 880 aa7.01□□□□□ -1.29
VPS50-216ENST00000484954 L3MBTL2Q969R5 705 aa7.01□□□□□ -1.29
VPS50-216ENST00000484954 A0A1W2PNR3 127 aa7□□□□□ -1.29
VPS50-216ENST00000484954 PTK7Q13308 1070 aa7□□□□□ -1.29
VPS50-216ENST00000484954 ZIC5Q96T25 663 aa7□□□□□ -1.29
VPS50-216ENST00000484954 GTF3C3Q9Y5Q9 886 aa7□□□□□ -1.29
VPS50-216ENST00000484954 EML1O00423 815 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 C21orf2O43822 256 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 NOS2P35228 1153 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 TNP2Q05952 138 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 DPYDQ12882 1025 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 TEAD4Q15561 434 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 CDCA8Q53HL2 280 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 PRRT3Q5FWE3 981 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 ARSJQ5FYB0 599 aaPredicted RBP6.99□□□□□ -1.29
VPS50-216ENST00000484954 C7orf43Q8WVR3 580 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 ZDHHC3Q9NYG2 299 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 PRR12Q9ULL5 1215 aa6.99□□□□□ -1.29
VPS50-216ENST00000484954 USP17L15C9J2P7 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L10C9JJH3 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L13C9JLJ4 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L11C9JVI0 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L21D6R901 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L18D6R9N7 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L22D6RA61 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L17D6RBQ6 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L19D6RCP7 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L20D6RJB6 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 RFX1P22670 979 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 USP17L24Q0WX57 530 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 NBPF1Q3BBV0 1214 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 C1orf216Q8TAB5 229 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 ZMYND15Q9H091 742 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 ZNF232Q9UNY5 417 aa6.98□□□□□ -1.29
VPS50-216ENST00000484954 M0R2N6 131 aa6.97□□□□□ -1.29
VPS50-216ENST00000484954 ARXQ96QS3 562 aa6.97□□□□□ -1.29
VPS50-216ENST00000484954 SERTM1A2A2V5 107 aa6.96□□□□□ -1.3
VPS50-216ENST00000484954 TATP17735 454 aaPredicted RBP6.96□□□□□ -1.3
VPS50-216ENST00000484954 SEC13P55735 322 aa6.96□□□□□ -1.3
VPS50-216ENST00000484954 LARP1Q6PKG0 1096 aaKnown RBP6.96□□□□□ -1.3
VPS50-216ENST00000484954 NLRP8Q86W28 1048 aa6.96□□□□□ -1.3
VPS50-216ENST00000484954 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
VPS50-216ENST00000484954 AVENQ9NQS1 362 aaPredicted RBP6.96□□□□□ -1.3
VPS50-216ENST00000484954 HCN4Q9Y3Q4 1203 aa6.96□□□□□ -1.3
VPS50-216ENST00000484954 ARID3CA6NKF2 412 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms