RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 NBPF15Q8N660 670 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 C16orf71Q8IYS4 520 aaPredicted RBP15.19■□□□□ 0.02
SCFD1-206ENST00000484733 CNKSR1Q969H4 720 aa15.19■□□□□ 0.02
SCFD1-206ENST00000484733 ZNF622Q969S3 477 aaKnown RBP eCLIP15.19■□□□□ 0.023e-6■□□□□ 8.1
SCFD1-206ENST00000484733 RRAGCQ9HB90 399 aa15.19■□□□□ 0.02
SCFD1-206ENST00000484733 FER1L6Q2WGJ9 1857 aa15.19■□□□□ 0.02
SCFD1-206ENST00000484733 CCDC88AQ3V6T2 1871 aa15.18■□□□□ 0.02
SCFD1-206ENST00000484733 LTBP3Q9NS15 1303 aa15.18■□□□□ 0.02
SCFD1-206ENST00000484733 GLTPD2A6NH11 291 aa15.18■□□□□ 0.02
SCFD1-206ENST00000484733 PIP4K2AP48426 406 aaPredicted RBP15.18■□□□□ 0.02
SCFD1-206ENST00000484733 DICER1Q9UPY3 1922 aaKnown RBP15.18■□□□□ 0.02
SCFD1-206ENST00000484733 KLRG2A4D1S0 409 aaPredicted RBP15.17■□□□□ 0.02
SCFD1-206ENST00000484733 SRGNP10124 158 aa15.17■□□□□ 0.02
SCFD1-206ENST00000484733 RALBP1Q15311 655 aa15.17■□□□□ 0.02
SCFD1-206ENST00000484733 MASTLQ96GX5 879 aa15.17■□□□□ 0.02
SCFD1-206ENST00000484733 TIAM2Q8IVF5 1701 aa15.17■□□□□ 0.02
SCFD1-206ENST00000484733 CCDC24Q8N4L8 307 aa15.17■□□□□ 0.02
SCFD1-206ENST00000484733 EIF4A1P60842 406 aaKnown RBP15.16■□□□□ 0.02
SCFD1-206ENST00000484733 SOGA3Q5TF21 947 aa15.16■□□□□ 0.02
SCFD1-206ENST00000484733 MIS18AQ9NYP9 233 aa15.16■□□□□ 0.02
SCFD1-206ENST00000484733 C21orf2O43822 256 aa15.16■□□□□ 0.02
SCFD1-206ENST00000484733 NBPF5PQ86XG9 351 aaPredicted RBP15.16■□□□□ 0.02
SCFD1-206ENST00000484733 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
SCFD1-206ENST00000484733 NPHP1O15259 732 aa15.15■□□□□ 0.02
SCFD1-206ENST00000484733 TPTE2Q6XPS3 522 aa15.15■□□□□ 0.02
SCFD1-206ENST00000484733 ERVV-1B6SEH8 477 aa15.15■□□□□ 0.02
SCFD1-206ENST00000484733 DNAJC5GQ8N7S2 189 aa15.15■□□□□ 0.02
SCFD1-206ENST00000484733 NIP7Q9Y221 180 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCFD1-206ENST00000484733 MAPK8IP3Q9UPT6 1336 aa15.14■□□□□ 0.01
SCFD1-206ENST00000484733 WDR90Q96KV7 1748 aa15.14■□□□□ 0.01
SCFD1-206ENST00000484733 VEGFAP15692 232 aaPredicted RBP15.14■□□□□ 0.01
SCFD1-206ENST00000484733 NPR1P16066 1061 aa15.14■□□□□ 0.01
SCFD1-206ENST00000484733 PRPF40BQ6NWY9 871 aaKnown RBP15.14■□□□□ 0.01
SCFD1-206ENST00000484733 C7orf43Q8WVR3 580 aa15.14■□□□□ 0.01
SCFD1-206ENST00000484733 BABAM1Q9NWV8 329 aa15.14■□□□□ 0.01
SCFD1-206ENST00000484733 SMC1BQ8NDV3 1235 aa15.13■□□□□ 0.01
SCFD1-206ENST00000484733 ERBB4Q15303 1308 aa15.13■□□□□ 0.01
SCFD1-206ENST00000484733 HLFQ16534 295 aa15.12■□□□□ 0.01
SCFD1-206ENST00000484733 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
SCFD1-206ENST00000484733 TAOK3Q9H2K8 898 aa15.12■□□□□ 0.01
SCFD1-206ENST00000484733 CACNA1SQ13698 1873 aa15.12■□□□□ 0.01
SCFD1-206ENST00000484733 NUP98P52948 1817 aa15.11■□□□□ 0.01
SCFD1-206ENST00000484733 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
SCFD1-206ENST00000484733 MAP3K15Q6ZN16 1313 aa15.11■□□□□ 0.01
SCFD1-206ENST00000484733 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
SCFD1-206ENST00000484733 THUMPD2Q9BTF0 503 aaKnown RBP15.11■□□□□ 0.01
SCFD1-206ENST00000484733 NYXQ9GZU5 481 aa15.11■□□□□ 0.01
SCFD1-206ENST00000484733 IBTKQ9P2D0 1353 aaPredicted RBP15.11■□□□□ 0.01
SCFD1-206ENST00000484733 RIC1Q4ADV7 1423 aa15.11■□□□□ 0.01
SCFD1-206ENST00000484733 POTECB2RU33 542 aa15.1■□□□□ 0.01
SCFD1-206ENST00000484733 CCDC93Q567U6 631 aa15.1■□□□□ 0.01
SCFD1-206ENST00000484733 ALDH1B1P30837 517 aa15.09■□□□□ 0.01
SCFD1-206ENST00000484733 RIPK4P57078 832 aa15.09■□□□□ 0.01
SCFD1-206ENST00000484733 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
SCFD1-206ENST00000484733 KIF6Q6ZMV9 814 aa15.09■□□□□ 0.01
SCFD1-206ENST00000484733 RRP7AQ9Y3A4 280 aaKnown RBP15.09■□□□□ 0.01
SCFD1-206ENST00000484733 MYBBP1AQ9BQG0 1328 aaKnown RBP15.09■□□□□ 0.01
SCFD1-206ENST00000484733 TTLL7Q6ZT98 887 aa15.09■□□□□ 0.01
SCFD1-206ENST00000484733 TMPOP42166 694 aaKnown RBP15.08■□□□□ 0
SCFD1-206ENST00000484733 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
SCFD1-206ENST00000484733 FKBP4Q02790 459 aaKnown RBP eCLIP15.08■□□□□ 0
SCFD1-206ENST00000484733 CRY2Q49AN0 593 aa15.08■□□□□ 0
SCFD1-206ENST00000484733 RTKN2Q8IZC4 609 aa15.08■□□□□ 0
SCFD1-206ENST00000484733 ZNF34Q8IZ26 560 aa15.07■□□□□ 0
SCFD1-206ENST00000484733 NGEFQ8N5V2 710 aa15.07■□□□□ 0
SCFD1-206ENST00000484733 KLRG1Q96E93 195 aa15.07■□□□□ 0
SCFD1-206ENST00000484733 FAM177BA6PVY3 158 aa15.06■□□□□ 0
SCFD1-206ENST00000484733 GTF2E1P29083 439 aaPredicted RBP15.06■□□□□ 0
SCFD1-206ENST00000484733 GIGYF2Q6Y7W6 1299 aaKnown RBP15.06■□□□□ 0
SCFD1-206ENST00000484733 LRP10Q7Z4F1 713 aa15.06■□□□□ 0
SCFD1-206ENST00000484733 JMYQ8N9B5 988 aa15.06■□□□□ 0
SCFD1-206ENST00000484733 MYL6BP14649 208 aa15.06■□□□□ 0
SCFD1-206ENST00000484733 DDX10Q13206 875 aaKnown RBP15.06■□□□□ 0
SCFD1-206ENST00000484733 IFFO2Q5TF58 517 aa15.06■□□□□ 0
SCFD1-206ENST00000484733 PDIA6Q15084 440 aa15.05■□□□□ 0
SCFD1-206ENST00000484733 ABCC12Q96J65 1359 aa15.05■□□□□ 0
SCFD1-206ENST00000484733 HOXA10P31260 410 aaPredicted RBP15.05■□□□□ -0
SCFD1-206ENST00000484733 CC2D2BQ6DHV5 1058 aa15.05■□□□□ -0
SCFD1-206ENST00000484733 CEP350Q5VT06 3117 aa15.05■□□□□ -0
SCFD1-206ENST00000484733 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
SCFD1-206ENST00000484733 SNED1Q8TER0 1413 aa15.04■□□□□ -0
SCFD1-206ENST00000484733 PARP10Q53GL7 1025 aa15.04■□□□□ -0
SCFD1-206ENST00000484733 SUSD4Q5VX71 490 aa15.04■□□□□ -0
SCFD1-206ENST00000484733 L3MBTL3Q96JM7 780 aaPredicted RBP15.04■□□□□ -0
SCFD1-206ENST00000484733 DDNO94850 711 aaPredicted RBP15.04■□□□□ -0
SCFD1-206ENST00000484733 GRIPAP1Q4V328 841 aa15.04■□□□□ -0
SCFD1-206ENST00000484733 RUNDC1Q96C34 613 aa15.04■□□□□ -0
SCFD1-206ENST00000484733 ZBTB3Q9H5J0 574 aa15.04■□□□□ -0
SCFD1-206ENST00000484733 SCN4AP35499 1836 aa15.03■□□□□ -0
SCFD1-206ENST00000484733 NTSR2O95665 410 aa15.03■□□□□ -0
SCFD1-206ENST00000484733 PPP1R42Q7Z4L9 355 aa15.03■□□□□ -0
SCFD1-206ENST00000484733 NUTM1Q86Y26 1132 aa15.03■□□□□ -0
SCFD1-206ENST00000484733 PSMD1Q99460 953 aa15.03■□□□□ -0
SCFD1-206ENST00000484733 HTRA3P83110 453 aa15.03■□□□□ -0
SCFD1-206ENST00000484733 CRAMP1Q96RY5 1269 aa15.03■□□□□ -0
SCFD1-206ENST00000484733 CHL1O00533 1208 aa15.02■□□□□ -0
SCFD1-206ENST00000484733 GPTP24298 496 aa15.02■□□□□ -0
SCFD1-206ENST00000484733 SLC10A5Q5PT55 438 aa15.02■□□□□ -0
SCFD1-206ENST00000484733 SYNE4Q8N205 404 aa15.02■□□□□ -0
SCFD1-206ENST00000484733 IQCA1LA6NCM1 817 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms