RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 CNTNAP5Q8WYK1 1306 aa12.51□□□□□ -0.41
UBR3-210ENST00000484596 C21orf2O43822 256 aa12.5□□□□□ -0.41
UBR3-210ENST00000484596 FAM157BP0CG42 384 aa12.5□□□□□ -0.41
UBR3-210ENST00000484596 LRRC69Q6ZNQ3 347 aa12.5□□□□□ -0.41
UBR3-210ENST00000484596 EDARADDQ8WWZ3 215 aa12.5□□□□□ -0.41
UBR3-210ENST00000484596 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
UBR3-210ENST00000484596 GGA1Q9UJY5 639 aa12.5□□□□□ -0.41
UBR3-210ENST00000484596 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
UBR3-210ENST00000484596 HIRAP54198 1017 aaPredicted RBP12.49□□□□□ -0.41
UBR3-210ENST00000484596 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
UBR3-210ENST00000484596 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
UBR3-210ENST00000484596 DNMT3AQ9Y6K1 912 aaPredicted RBP12.49□□□□□ -0.41
UBR3-210ENST00000484596 PPP1R12BO60237 982 aaPredicted RBP12.48□□□□□ -0.41
UBR3-210ENST00000484596 RFX1P22670 979 aa12.48□□□□□ -0.41
UBR3-210ENST00000484596 DPYDQ12882 1025 aa12.48□□□□□ -0.41
UBR3-210ENST00000484596 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
UBR3-210ENST00000484596 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
UBR3-210ENST00000484596 BEND7Q8N7W2 519 aaPredicted RBP12.48□□□□□ -0.41
UBR3-210ENST00000484596 PBXIP1Q96AQ6 731 aa12.48□□□□□ -0.41
UBR3-210ENST00000484596 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
UBR3-210ENST00000484596 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L21D6R901 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 ARAFP10398 606 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 C1orf53Q5VUE5 145 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 KANK3Q6NY19 840 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 SLCO4C1Q6ZQN7 724 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 NEUROD4Q9HD90 331 aa12.47□□□□□ -0.41
UBR3-210ENST00000484596 GPC6Q9Y625 555 aaPredicted RBP12.47□□□□□ -0.41
UBR3-210ENST00000484596 FAM196BA6NMK8 535 aa12.46□□□□□ -0.41
UBR3-210ENST00000484596 EFSO43281 561 aa12.46□□□□□ -0.41
UBR3-210ENST00000484596 ANKMY2Q8IV38 441 aa12.46□□□□□ -0.41
UBR3-210ENST00000484596 SCG3Q8WXD2 468 aaKnown RBP12.46□□□□□ -0.41
UBR3-210ENST00000484596 HINFPQ9BQA5 517 aa12.46□□□□□ -0.41
UBR3-210ENST00000484596 PHACTR1Q9C0D0 580 aa12.46□□□□□ -0.41
UBR3-210ENST00000484596 NEURL1BA8MQ27 555 aa12.45□□□□□ -0.42
UBR3-210ENST00000484596 LGR5O75473 907 aa12.45□□□□□ -0.42
UBR3-210ENST00000484596 SNRPNP63162 240 aaKnown RBP12.45□□□□□ -0.42
UBR3-210ENST00000484596 PODNQ7Z5L7 613 aa12.45□□□□□ -0.42
UBR3-210ENST00000484596 MARK1Q9P0L2 795 aa12.45□□□□□ -0.42
UBR3-210ENST00000484596 KLF15Q9UIH9 416 aa12.45□□□□□ -0.42
UBR3-210ENST00000484596 PHF20L1A8MW92 1017 aa12.44□□□□□ -0.42
UBR3-210ENST00000484596 LAMC2Q13753 1193 aa12.44□□□□□ -0.42
UBR3-210ENST00000484596 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
UBR3-210ENST00000484596 C2orf49Q9BVC5 232 aaPredicted RBP12.44□□□□□ -0.42
UBR3-210ENST00000484596 STAG2Q8N3U4 1231 aa12.43□□□□□ -0.42
UBR3-210ENST00000484596 GAS2L2Q8NHY3 880 aa12.43□□□□□ -0.42
UBR3-210ENST00000484596 EPXP11678 715 aa12.42□□□□□ -0.42
UBR3-210ENST00000484596 HSH2DQ96JZ2 352 aa12.42□□□□□ -0.42
UBR3-210ENST00000484596 PRR12Q9ULL5 1215 aa12.42□□□□□ -0.42
UBR3-210ENST00000484596 ADH6P28332 368 aa12.41□□□□□ -0.42
UBR3-210ENST00000484596 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
UBR3-210ENST00000484596 ALDH16A1Q8IZ83 802 aa12.41□□□□□ -0.42
UBR3-210ENST00000484596 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.4□□□□□ -0.42
UBR3-210ENST00000484596 AMPD1P23109 780 aa12.4□□□□□ -0.42
UBR3-210ENST00000484596 PCBP4P57723 403 aaKnown RBP12.4□□□□□ -0.42
UBR3-210ENST00000484596 SRPK2P78362 688 aaKnown RBP12.4□□□□□ -0.42
UBR3-210ENST00000484596 SFSWAPQ12872 951 aaKnown RBP12.4□□□□□ -0.42
UBR3-210ENST00000484596 GRIN2CQ14957 1233 aa12.4□□□□□ -0.42
UBR3-210ENST00000484596 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
UBR3-210ENST00000484596 BTBD6Q96KE9 485 aa12.4□□□□□ -0.42
UBR3-210ENST00000484596 RRAGCQ9HB90 399 aa12.4□□□□□ -0.42
UBR3-210ENST00000484596 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
UBR3-210ENST00000484596 PDE4CQ08493 712 aa12.39□□□□□ -0.43
UBR3-210ENST00000484596 ZNF468Q5VIY5 522 aaPredicted RBP12.39□□□□□ -0.43
UBR3-210ENST00000484596 NGLY1Q96IV0 654 aa12.39□□□□□ -0.43
UBR3-210ENST00000484596 SUSD3Q96L08 255 aa12.39□□□□□ -0.43
UBR3-210ENST00000484596 ANKIB1Q9P2G1 1089 aa12.39□□□□□ -0.43
UBR3-210ENST00000484596 HOXB4P17483 251 aaPredicted RBP12.38□□□□□ -0.43
UBR3-210ENST00000484596 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
UBR3-210ENST00000484596 CEP63Q96MT8 703 aa12.37□□□□□ -0.43
UBR3-210ENST00000484596 MKL2Q9ULH7 1088 aa12.37□□□□□ -0.43
UBR3-210ENST00000484596 ATG7O95352 703 aa12.36□□□□□ -0.43
UBR3-210ENST00000484596 IGFBP4P22692 258 aa12.36□□□□□ -0.43
UBR3-210ENST00000484596 FAM200AQ8TCP9 573 aa12.35□□□□□ -0.43
UBR3-210ENST00000484596 DCAF5Q96JK2 942 aa12.35□□□□□ -0.43
UBR3-210ENST00000484596 SLC30A3Q99726 388 aa12.35□□□□□ -0.43
UBR3-210ENST00000484596 BRD7Q9NPI1 651 aa12.35□□□□□ -0.43
UBR3-210ENST00000484596 TYRO3Q06418 890 aa12.34□□□□□ -0.43
UBR3-210ENST00000484596 LINC00114Q6XXX2 140 aa12.34□□□□□ -0.43
UBR3-210ENST00000484596 SYT9Q86SS6 491 aa12.34□□□□□ -0.43
UBR3-210ENST00000484596 CHSY3Q70JA7 882 aa12.33□□□□□ -0.44
UBR3-210ENST00000484596 WEE1P30291 646 aa12.32□□□□□ -0.44
UBR3-210ENST00000484596 ELOAQ14241 798 aaKnown RBP12.31□□□□□ -0.44
UBR3-210ENST00000484596 RTN1Q16799 776 aa12.31□□□□□ -0.44
UBR3-210ENST00000484596 GPAT2Q6NUI2 795 aa12.31□□□□□ -0.44
UBR3-210ENST00000484596 BTLAQ7Z6A9 289 aa12.31□□□□□ -0.44
UBR3-210ENST00000484596 NOVA2Q9UNW9 492 aaKnown RBP12.31□□□□□ -0.44
UBR3-210ENST00000484596 DGKGP49619 791 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms