RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ECHDC1Q9NTX5 307 aa23.74■■□□□ 1.39
LIMS2-215ENST00000484252 HYPKQ9NX55 129 aa23.74■■□□□ 1.39
LIMS2-215ENST00000484252 LIMCH1Q9UPQ0 1083 aa23.74■■□□□ 1.39
LIMS2-215ENST00000484252 CAMTA1Q9Y6Y1 1673 aa23.73■■□□□ 1.39
LIMS2-215ENST00000484252 PHF14O94880 888 aa23.73■■□□□ 1.39
LIMS2-215ENST00000484252 GCP02774 474 aa23.73■■□□□ 1.39
LIMS2-215ENST00000484252 ANXA1P04083 346 aa23.73■■□□□ 1.39
LIMS2-215ENST00000484252 MSNP26038 577 aaKnown RBP23.73■■□□□ 1.39
LIMS2-215ENST00000484252 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.73■■□□□ 1.39
LIMS2-215ENST00000484252 PXDNQ92626 1479 aa23.73■■□□□ 1.39
LIMS2-215ENST00000484252 CWC27Q6UX04 472 aaKnown RBP23.72■■□□□ 1.39
LIMS2-215ENST00000484252 TMEM87AQ8NBN3 555 aa23.72■■□□□ 1.39
LIMS2-215ENST00000484252 ZMYND15Q9H091 742 aa23.72■■□□□ 1.39
LIMS2-215ENST00000484252 RBM33Q96EV2 1170 aaKnown RBP23.71■■□□□ 1.39
LIMS2-215ENST00000484252 RPAP1Q9BWH6 1393 aaPredicted RBP23.71■■□□□ 1.39
LIMS2-215ENST00000484252 ANKRD24Q8TF21 1146 aa23.71■■□□□ 1.39
LIMS2-215ENST00000484252 DDX58O95786 925 aaKnown RBP23.7■■□□□ 1.38
LIMS2-215ENST00000484252 IFIT2P09913 472 aaKnown RBP23.7■■□□□ 1.38
LIMS2-215ENST00000484252 AK2P54819 239 aa23.7■■□□□ 1.38
LIMS2-215ENST00000484252 RASEFQ8IZ41 740 aa23.7■■□□□ 1.38
LIMS2-215ENST00000484252 LINS1Q8NG48 757 aa23.7■■□□□ 1.38
LIMS2-215ENST00000484252 UTYO14607 1347 aa23.7■■□□□ 1.38
LIMS2-215ENST00000484252 KCNB2Q92953 911 aa23.69■■□□□ 1.38
LIMS2-215ENST00000484252 EVI5LQ96CN4 794 aa23.69■■□□□ 1.38
LIMS2-215ENST00000484252 TM6SF1Q9BZW5 370 aa23.69■■□□□ 1.38
LIMS2-215ENST00000484252 TSPY26PQ9H489 355 aa23.69■■□□□ 1.38
LIMS2-215ENST00000484252 NOL7Q9UMY1 257 aaKnown RBP23.69■■□□□ 1.38
LIMS2-215ENST00000484252 SIPA1L3O60292 1781 aaPredicted RBP23.68■■□□□ 1.38
LIMS2-215ENST00000484252 SETD1BQ9UPS6 1966 aaKnown RBP23.68■■□□□ 1.38
LIMS2-215ENST00000484252 ADAMTS7Q9UKP4 1686 aa23.68■■□□□ 1.38
LIMS2-215ENST00000484252 HIP1O00291 1037 aa23.68■■□□□ 1.38
LIMS2-215ENST00000484252 ZSCAN22P10073 491 aaPredicted RBP23.68■■□□□ 1.38
LIMS2-215ENST00000484252 RUFY3Q7L099 469 aa23.68■■□□□ 1.38
LIMS2-215ENST00000484252 USP48Q86UV5 1035 aa23.68■■□□□ 1.38
LIMS2-215ENST00000484252 SPG7Q9UQ90 795 aa23.68■■□□□ 1.38
LIMS2-215ENST00000484252 ADAMTSL3P82987 1691 aa23.67■■□□□ 1.38
LIMS2-215ENST00000484252 PROSER3Q2NL68 480 aa23.67■■□□□ 1.38
LIMS2-215ENST00000484252 ZSCAN31Q96LW9 406 aaPredicted RBP23.67■■□□□ 1.38
LIMS2-215ENST00000484252 DDX21Q9NR30 783 aaKnown RBP eCLIP23.67■■□□□ 1.38
LIMS2-215ENST00000484252 ATP6V1DQ9Y5K8 247 aa23.67■■□□□ 1.38
LIMS2-215ENST00000484252 GRM8O00222 908 aa23.66■■□□□ 1.38
LIMS2-215ENST00000484252 VPS53Q5VIR6 699 aa23.66■■□□□ 1.38
LIMS2-215ENST00000484252 MCM5P33992 734 aa23.66■■□□□ 1.38
LIMS2-215ENST00000484252 KLHL34Q8N239 644 aa23.66■■□□□ 1.38
LIMS2-215ENST00000484252 SMC3Q9UQE7 1217 aa23.66■■□□□ 1.38
LIMS2-215ENST00000484252 TPM2P07951 284 aa23.65■■□□□ 1.38
LIMS2-215ENST00000484252 CASTP20810 708 aaKnown RBP23.65■■□□□ 1.38
LIMS2-215ENST00000484252 SH2B1Q9NRF2 756 aaPredicted RBP23.65■■□□□ 1.38
LIMS2-215ENST00000484252 STX6O43752 255 aa23.64■■□□□ 1.38
LIMS2-215ENST00000484252 OFD1O75665 1012 aa23.64■■□□□ 1.38
LIMS2-215ENST00000484252 CWF19L2Q2TBE0 894 aaKnown RBP23.64■■□□□ 1.38
LIMS2-215ENST00000484252 AACSQ86V21 672 aa23.64■■□□□ 1.38
LIMS2-215ENST00000484252 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.64■■□□□ 1.37
LIMS2-215ENST00000484252 ZSWIM6Q9HCJ5 1215 aa23.64■■□□□ 1.37
LIMS2-215ENST00000484252 CCDC39Q9UFE4 941 aa23.64■■□□□ 1.37
LIMS2-215ENST00000484252 ZNF500O60304 480 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-215ENST00000484252 LETM1O95202 739 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-215ENST00000484252 G3BP1Q13283 466 aaKnown RBP eCLIP23.63■■□□□ 1.37
LIMS2-215ENST00000484252 PDRG1Q9NUG6 133 aa23.63■■□□□ 1.37
LIMS2-215ENST00000484252 PA2G4Q9UQ80 394 aaKnown RBP23.63■■□□□ 1.37
LIMS2-215ENST00000484252 GADD45BO75293 160 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-215ENST00000484252 SYT1P21579 422 aa23.63■■□□□ 1.37
LIMS2-215ENST00000484252 PTH1RQ03431 593 aa23.63■■□□□ 1.37
LIMS2-215ENST00000484252 FAM184AQ8NB25 1140 aa23.63■■□□□ 1.37
LIMS2-215ENST00000484252 SUCLG2Q96I99 432 aa23.63■■□□□ 1.37
LIMS2-215ENST00000484252 CYP46A1Q9Y6A2 500 aa23.63■■□□□ 1.37
LIMS2-215ENST00000484252 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
LIMS2-215ENST00000484252 ORAI2Q96SN7 254 aa23.62■■□□□ 1.37
LIMS2-215ENST00000484252 SNRKQ9NRH2 765 aa23.62■■□□□ 1.37
LIMS2-215ENST00000484252 CCDC171Q6TFL3 1326 aa23.62■■□□□ 1.37
LIMS2-215ENST00000484252 ZKSCAN1P17029 563 aaPredicted RBP23.61■■□□□ 1.37
LIMS2-215ENST00000484252 CSPP1Q1MSJ5 1256 aa23.61■■□□□ 1.37
LIMS2-215ENST00000484252 CCDC183Q5T5S1 534 aa23.61■■□□□ 1.37
LIMS2-215ENST00000484252 JAKMIP1Q96N16 626 aaKnown RBP23.61■■□□□ 1.37
LIMS2-215ENST00000484252 GDPD2Q9HCC8 539 aa23.61■■□□□ 1.37
LIMS2-215ENST00000484252 MST1RQ04912 1400 aa23.61■■□□□ 1.37
LIMS2-215ENST00000484252 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
LIMS2-215ENST00000484252 F13A1P00488 732 aa23.61■■□□□ 1.37
LIMS2-215ENST00000484252 PDIA4P13667 645 aaKnown RBP23.61■■□□□ 1.37
LIMS2-215ENST00000484252 NECTIN1Q15223 517 aa23.61■■□□□ 1.37
LIMS2-215ENST00000484252 PRPF40BQ6NWY9 871 aaKnown RBP23.61■■□□□ 1.37
LIMS2-215ENST00000484252 UBE2HP62256 183 aa23.6■■□□□ 1.37
LIMS2-215ENST00000484252 UVSSAQ2YD98 709 aa23.6■■□□□ 1.37
LIMS2-215ENST00000484252 LARP1Q6PKG0 1096 aaKnown RBP23.6■■□□□ 1.37
LIMS2-215ENST00000484252 KAZALD1Q96I82 304 aa23.6■■□□□ 1.37
LIMS2-215ENST00000484252 BICC1Q9H694 974 aaKnown RBP23.6■■□□□ 1.37
LIMS2-215ENST00000484252 ZKSCAN5Q9Y2L8 839 aa23.6■■□□□ 1.37
LIMS2-215ENST00000484252 PRAMEF22A3QJZ6 481 aa23.6■■□□□ 1.37
LIMS2-215ENST00000484252 TERF1P54274 439 aa23.6■■□□□ 1.37
LIMS2-215ENST00000484252 FOXD4L6Q3SYB3 417 aaPredicted RBP23.6■■□□□ 1.37
LIMS2-215ENST00000484252 FOXD4L3Q6VB84 417 aaPredicted RBP23.6■■□□□ 1.37
LIMS2-215ENST00000484252 KIF1AQ12756 1690 aa23.59■■□□□ 1.37
LIMS2-215ENST00000484252 SASH1O94885 1247 aa23.59■■□□□ 1.37
LIMS2-215ENST00000484252 PDIA6Q15084 440 aa23.59■■□□□ 1.37
LIMS2-215ENST00000484252 RNF214Q8ND24 703 aa23.58■■□□□ 1.37
LIMS2-215ENST00000484252 CNPY2Q9Y2B0 182 aa23.58■■□□□ 1.37
LIMS2-215ENST00000484252 XPCQ01831 940 aaPredicted RBP23.58■■□□□ 1.36
LIMS2-215ENST00000484252 NEXNQ0ZGT2 675 aa23.58■■□□□ 1.36
LIMS2-215ENST00000484252 LMOD2Q6P5Q4 547 aa23.58■■□□□ 1.36
LIMS2-215ENST00000484252 MAP4K1Q92918 833 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms