RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
DNMT3A-213ENST00000484184 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
DNMT3A-213ENST00000484184 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-213ENST00000484184 MASTLQ96GX5 879 aa17.27■□□□□ 0.36
DNMT3A-213ENST00000484184 SETDB2Q96T68 719 aa17.27■□□□□ 0.36
DNMT3A-213ENST00000484184 ZNF330Q9Y3S2 320 aaPredicted RBP17.27■□□□□ 0.36
DNMT3A-213ENST00000484184 BCORQ6W2J9 1755 aa17.27■□□□□ 0.35
DNMT3A-213ENST00000484184 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
DNMT3A-213ENST00000484184 ADAMTSL1Q8N6G6 1762 aa17.26■□□□□ 0.35
DNMT3A-213ENST00000484184 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
DNMT3A-213ENST00000484184 VEGFBP49765 207 aa17.26■□□□□ 0.35
DNMT3A-213ENST00000484184 IQCA1LA6NCM1 817 aa17.25■□□□□ 0.35
DNMT3A-213ENST00000484184 KCNQ3O43525 872 aa17.25■□□□□ 0.35
DNMT3A-213ENST00000484184 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
DNMT3A-213ENST00000484184 WBP1LQ9NX94 342 aa17.25■□□□□ 0.35
DNMT3A-213ENST00000484184 CEMIPQ8WUJ3 1361 aa17.25■□□□□ 0.35
DNMT3A-213ENST00000484184 ZNF541Q9H0D2 1346 aa17.24■□□□□ 0.35
DNMT3A-213ENST00000484184 KLRG2A4D1S0 409 aaPredicted RBP17.24■□□□□ 0.35
DNMT3A-213ENST00000484184 TMEM88BA6NKF7 163 aa17.24■□□□□ 0.35
DNMT3A-213ENST00000484184 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
DNMT3A-213ENST00000484184 TEFQ10587 303 aa17.24■□□□□ 0.35
DNMT3A-213ENST00000484184 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
DNMT3A-213ENST00000484184 ST5P78524 1137 aa17.23■□□□□ 0.35
DNMT3A-213ENST00000484184 DZIP3Q86Y13 1208 aaKnown RBP17.23■□□□□ 0.35
DNMT3A-213ENST00000484184 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
DNMT3A-213ENST00000484184 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-213ENST00000484184 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
DNMT3A-213ENST00000484184 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
DNMT3A-213ENST00000484184 ZNF277Q9NRM2 450 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-213ENST00000484184 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
DNMT3A-213ENST00000484184 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
DNMT3A-213ENST00000484184 CLEC4GQ6UXB4 293 aa17.21■□□□□ 0.35
DNMT3A-213ENST00000484184 GAS2L2Q8NHY3 880 aa17.21■□□□□ 0.35
DNMT3A-213ENST00000484184 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.34
DNMT3A-213ENST00000484184 PRAMEF22A3QJZ6 481 aa17.2■□□□□ 0.34
DNMT3A-213ENST00000484184 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
DNMT3A-213ENST00000484184 NPR1P16066 1061 aa17.2■□□□□ 0.34
DNMT3A-213ENST00000484184 LBX1P52954 281 aa17.2■□□□□ 0.34
DNMT3A-213ENST00000484184 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
DNMT3A-213ENST00000484184 SNED1Q8TER0 1413 aa17.2■□□□□ 0.34
DNMT3A-213ENST00000484184 NPHP1O15259 732 aa17.19■□□□□ 0.34
DNMT3A-213ENST00000484184 EPHX2P34913 555 aa17.19■□□□□ 0.34
DNMT3A-213ENST00000484184 EAPPQ56P03 285 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-213ENST00000484184 CC2D1BQ5T0F9 858 aaKnown RBP17.19■□□□□ 0.34
DNMT3A-213ENST00000484184 NBPF5PQ86XG9 351 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-213ENST00000484184 AIDAQ96BJ3 306 aa17.19■□□□□ 0.34
DNMT3A-213ENST00000484184 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
DNMT3A-213ENST00000484184 FZD9O00144 591 aa17.18■□□□□ 0.34
DNMT3A-213ENST00000484184 HSPA8P11142 646 aaKnown RBP17.18■□□□□ 0.34
DNMT3A-213ENST00000484184 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
DNMT3A-213ENST00000484184 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
DNMT3A-213ENST00000484184 NBPF26B4DH59 902 aa17.17■□□□□ 0.34
DNMT3A-213ENST00000484184 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
DNMT3A-213ENST00000484184 MAP1SQ66K74 1059 aaPredicted RBP17.17■□□□□ 0.34
DNMT3A-213ENST00000484184 NBPF10Q6P3W6 841 aaKnown RBP17.17■□□□□ 0.34
DNMT3A-213ENST00000484184 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
DNMT3A-213ENST00000484184 NBPF15Q8N660 670 aa17.17■□□□□ 0.34
DNMT3A-213ENST00000484184 RNF123Q5XPI4 1314 aa17.17■□□□□ 0.34
DNMT3A-213ENST00000484184 SLC34A2O95436 690 aa17.16■□□□□ 0.34
DNMT3A-213ENST00000484184 DEFB115Q30KQ5 88 aa17.16■□□□□ 0.34
DNMT3A-213ENST00000484184 RTKN2Q8IZC4 609 aa17.16■□□□□ 0.34
DNMT3A-213ENST00000484184 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
DNMT3A-213ENST00000484184 COL4A5P29400 1685 aa17.16■□□□□ 0.34
DNMT3A-213ENST00000484184 RGL2O15211 777 aa17.15■□□□□ 0.34
DNMT3A-213ENST00000484184 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
DNMT3A-213ENST00000484184 TPTE2Q6XPS3 522 aa17.15■□□□□ 0.34
DNMT3A-213ENST00000484184 PNMA8AQ86V59 439 aaPredicted RBP17.15■□□□□ 0.34
DNMT3A-213ENST00000484184 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
DNMT3A-213ENST00000484184 ABHD8Q96I13 439 aa17.15■□□□□ 0.34
DNMT3A-213ENST00000484184 LTBP1Q14766 1721 aa17.14■□□□□ 0.33
DNMT3A-213ENST00000484184 GPC2Q8N158 579 aa17.14■□□□□ 0.33
DNMT3A-213ENST00000484184 NIP7Q9Y221 180 aaKnown RBP eCLIP17.14■□□□□ 0.33
DNMT3A-213ENST00000484184 ZNF652Q9Y2D9 606 aa17.14■□□□□ 0.33
DNMT3A-213ENST00000484184 WDR33Q9C0J8 1336 aaKnown RBP17.14■□□□□ 0.33
DNMT3A-213ENST00000484184 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
DNMT3A-213ENST00000484184 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
DNMT3A-213ENST00000484184 HLFQ16534 295 aa17.13■□□□□ 0.33
DNMT3A-213ENST00000484184 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
DNMT3A-213ENST00000484184 THSD7BQ9C0I4 1608 aa17.13■□□□□ 0.33
DNMT3A-213ENST00000484184 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
DNMT3A-213ENST00000484184 MAP2K1Q02750 393 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-213ENST00000484184 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
DNMT3A-213ENST00000484184 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
DNMT3A-213ENST00000484184 PSMD1Q99460 953 aa17.12■□□□□ 0.33
DNMT3A-213ENST00000484184 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
DNMT3A-213ENST00000484184 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
DNMT3A-213ENST00000484184 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
DNMT3A-213ENST00000484184 FAM161AQ3B820 660 aa17.1■□□□□ 0.33
DNMT3A-213ENST00000484184 ABT1Q9ULW3 272 aaKnown RBP17.1■□□□□ 0.33
DNMT3A-213ENST00000484184 ABCC12Q96J65 1359 aa17.1■□□□□ 0.33
DNMT3A-213ENST00000484184 SCNN1DP51172 638 aa17.09■□□□□ 0.33
DNMT3A-213ENST00000484184 MCM10Q7L590 875 aa17.09■□□□□ 0.33
DNMT3A-213ENST00000484184 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
DNMT3A-213ENST00000484184 EPS15P42566 896 aa17.08■□□□□ 0.32
DNMT3A-213ENST00000484184 CST9Q5W186 159 aa17.08■□□□□ 0.32
DNMT3A-213ENST00000484184 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
DNMT3A-213ENST00000484184 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
DNMT3A-213ENST00000484184 CAPNS2Q96L46 248 aa17.07■□□□□ 0.32
DNMT3A-213ENST00000484184 GJA3Q9Y6H8 435 aa17.07■□□□□ 0.32
DNMT3A-213ENST00000484184 TRPM7Q96QT4 1865 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms