RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 STARD3NLO95772 234 aa11.75□□□□□ -0.53
RTFDC1-208ENST00000484084 VEGFBP49765 207 aa11.75□□□□□ -0.53
RTFDC1-208ENST00000484084 PRDM10Q9NQV6 1147 aa11.75□□□□□ -0.53
RTFDC1-208ENST00000484084 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
RTFDC1-208ENST00000484084 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
RTFDC1-208ENST00000484084 LTBP1Q14766 1721 aa11.74□□□□□ -0.53
RTFDC1-208ENST00000484084 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
RTFDC1-208ENST00000484084 KNSTRNQ9Y448 316 aa11.74□□□□□ -0.53
RTFDC1-208ENST00000484084 USP16Q9Y5T5 823 aa11.74□□□□□ -0.53
RTFDC1-208ENST00000484084 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 PIP4K2AP48426 406 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 TRIM26Q12899 539 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 KIF7Q2M1P5 1343 aa11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 CNKSR1Q969H4 720 aa11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 MASTLQ96GX5 879 aa11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
RTFDC1-208ENST00000484084 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
RTFDC1-208ENST00000484084 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
RTFDC1-208ENST00000484084 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
RTFDC1-208ENST00000484084 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-208ENST00000484084 TTC5Q8N0Z6 440 aa11.72□□□□□ -0.53
RTFDC1-208ENST00000484084 NBPF15Q8N660 670 aa11.72□□□□□ -0.53
RTFDC1-208ENST00000484084 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
RTFDC1-208ENST00000484084 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-208ENST00000484084 RASSF10A6NK89 507 aa11.71□□□□□ -0.53
RTFDC1-208ENST00000484084 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.53
RTFDC1-208ENST00000484084 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.53
RTFDC1-208ENST00000484084 FZD9O00144 591 aa11.71□□□□□ -0.53
RTFDC1-208ENST00000484084 SLC51AQ86UW1 340 aa11.71□□□□□ -0.53
RTFDC1-208ENST00000484084 ZNF277Q9NRM2 450 aaPredicted RBP11.71□□□□□ -0.53
RTFDC1-208ENST00000484084 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.53
RTFDC1-208ENST00000484084 IQCA1LA6NCM1 817 aa11.7□□□□□ -0.54
RTFDC1-208ENST00000484084 SLC34A2O95436 690 aa11.7□□□□□ -0.54
RTFDC1-208ENST00000484084 LBX1P52954 281 aa11.7□□□□□ -0.54
RTFDC1-208ENST00000484084 FKBP4Q02790 459 aaKnown RBP eCLIP11.7□□□□□ -0.54
RTFDC1-208ENST00000484084 DZIP3Q86Y13 1208 aaKnown RBP11.7□□□□□ -0.54
RTFDC1-208ENST00000484084 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
RTFDC1-208ENST00000484084 HSPA8P11142 646 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-208ENST00000484084 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-208ENST00000484084 FMR1Q06787 632 aaKnown RBP eCLIP11.69□□□□□ -0.54
RTFDC1-208ENST00000484084 SOGA3Q5TF21 947 aa11.69□□□□□ -0.54
RTFDC1-208ENST00000484084 MAP1SQ66K74 1059 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-208ENST00000484084 CLEC4GQ6UXB4 293 aa11.69□□□□□ -0.54
RTFDC1-208ENST00000484084 RNF123Q5XPI4 1314 aa11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 NPR1P16066 1061 aa11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 EPHX2P34913 555 aa11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 ST5P78524 1137 aa11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 TEFQ10587 303 aa11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 HLFQ16534 295 aa11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 CCDC93Q567U6 631 aa11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 CC2D1BQ5T0F9 858 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 CNTROBQ8N137 903 aa11.68□□□□□ -0.54
RTFDC1-208ENST00000484084 BTBD11A6QL63 1104 aa11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 CRY2Q49AN0 593 aa11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 NBPF5PQ86XG9 351 aaPredicted RBP11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 ABHD8Q96I13 439 aa11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 HACL1Q9UJ83 578 aa11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 ABCC12Q96J65 1359 aa11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
RTFDC1-208ENST00000484084 WDR33Q9C0J8 1336 aaKnown RBP11.66□□□□□ -0.54
RTFDC1-208ENST00000484084 RGL2O15211 777 aa11.66□□□□□ -0.54
RTFDC1-208ENST00000484084 IARSP41252 1262 aaKnown RBP11.66□□□□□ -0.54
RTFDC1-208ENST00000484084 DEFB115Q30KQ5 88 aa11.66□□□□□ -0.54
RTFDC1-208ENST00000484084 EAPPQ56P03 285 aaPredicted RBP11.66□□□□□ -0.54
RTFDC1-208ENST00000484084 CST9Q5W186 159 aa11.66□□□□□ -0.54
RTFDC1-208ENST00000484084 SYNE4Q8N205 404 aa11.66□□□□□ -0.54
RTFDC1-208ENST00000484084 SCNN1DP51172 638 aa11.65□□□□□ -0.54
RTFDC1-208ENST00000484084 RTKN2Q8IZC4 609 aa11.65□□□□□ -0.54
RTFDC1-208ENST00000484084 GPC2Q8N158 579 aa11.65□□□□□ -0.54
RTFDC1-208ENST00000484084 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 PRKAR2BP31323 418 aa11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 TPTE2Q6XPS3 522 aa11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 MCM10Q7L590 875 aa11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 PSMD1Q99460 953 aa11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 DDX21Q9NR30 783 aaKnown RBP eCLIP11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
RTFDC1-208ENST00000484084 TNRC18O15417 2968 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 EPS15P42566 896 aa11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 RGS19P49795 217 aa11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 DCTN1Q14203 1278 aa11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 FAM161AQ3B820 660 aa11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 CLEC11AQ9Y240 323 aa11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 LAMB4A4D0S4 1761 aa11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 NUP98P52948 1817 aa11.63□□□□□ -0.55
RTFDC1-208ENST00000484084 TRAF5O00463 557 aa11.62□□□□□ -0.55
RTFDC1-208ENST00000484084 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
RTFDC1-208ENST00000484084 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
RTFDC1-208ENST00000484084 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
RTFDC1-208ENST00000484084 UBN2Q6ZU65 1347 aa11.61□□□□□ -0.55
RTFDC1-208ENST00000484084 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
RTFDC1-208ENST00000484084 FAM177BA6PVY3 158 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms