RNA–Protein interactions for RNA: ENST00000483973.5

TRAPPC10-210, Transcript of trafficking protein particle complex 10, humanhuman

TSL 3

Gene TRAPPC10, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-210ENST00000483973 PIP4K2AP48426 406 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC10-210ENST00000483973 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
TRAPPC10-210ENST00000483973 BTBD11A6QL63 1104 aa17.81■□□□□ 0.44
TRAPPC10-210ENST00000483973 STYK1Q6J9G0 422 aa17.81■□□□□ 0.44
TRAPPC10-210ENST00000483973 CHADLQ6NUI6 762 aa17.81■□□□□ 0.44
TRAPPC10-210ENST00000483973 PRPF40BQ6NWY9 871 aaKnown RBP17.81■□□□□ 0.44
TRAPPC10-210ENST00000483973 LTBP3Q9NS15 1303 aa17.8■□□□□ 0.44
TRAPPC10-210ENST00000483973 SRGNP10124 158 aa17.8■□□□□ 0.44
TRAPPC10-210ENST00000483973 MASTLQ96GX5 879 aa17.8■□□□□ 0.44
TRAPPC10-210ENST00000483973 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
TRAPPC10-210ENST00000483973 SCN4AP35499 1836 aa17.79■□□□□ 0.44
TRAPPC10-210ENST00000483973 POTEIP0CG38 1075 aa17.79■□□□□ 0.44
TRAPPC10-210ENST00000483973 POTEJP0CG39 1038 aa17.79■□□□□ 0.44
TRAPPC10-210ENST00000483973 PRKAR2BP31323 418 aa17.79■□□□□ 0.44
TRAPPC10-210ENST00000483973 SOGA3Q5TF21 947 aa17.79■□□□□ 0.44
TRAPPC10-210ENST00000483973 NBPF5PQ86XG9 351 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC10-210ENST00000483973 PHACTR3Q96KR7 559 aa17.79■□□□□ 0.44
TRAPPC10-210ENST00000483973 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
TRAPPC10-210ENST00000483973 CREBZFQ9NS37 354 aa17.78■□□□□ 0.44
TRAPPC10-210ENST00000483973 PCNTO95613 3336 aa17.78■□□□□ 0.44
TRAPPC10-210ENST00000483973 CEMIPQ8WUJ3 1361 aa17.77■□□□□ 0.43
TRAPPC10-210ENST00000483973 PRAMEF22A3QJZ6 481 aa17.76■□□□□ 0.43
TRAPPC10-210ENST00000483973 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
TRAPPC10-210ENST00000483973 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
TRAPPC10-210ENST00000483973 IQCA1LA6NCM1 817 aa17.75■□□□□ 0.43
TRAPPC10-210ENST00000483973 FAM177BA6PVY3 158 aa17.75■□□□□ 0.43
TRAPPC10-210ENST00000483973 CCDC93Q567U6 631 aa17.75■□□□□ 0.43
TRAPPC10-210ENST00000483973 NPC1L1Q9UHC9 1359 aa17.75■□□□□ 0.43
TRAPPC10-210ENST00000483973 SNRPA1P09661 255 aaKnown RBP17.74■□□□□ 0.43
TRAPPC10-210ENST00000483973 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
TRAPPC10-210ENST00000483973 MCM10Q7L590 875 aa17.74■□□□□ 0.43
TRAPPC10-210ENST00000483973 RTF1Q92541 710 aaKnown RBP17.74■□□□□ 0.43
TRAPPC10-210ENST00000483973 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
TRAPPC10-210ENST00000483973 NPR1P16066 1061 aa17.73■□□□□ 0.43
TRAPPC10-210ENST00000483973 EAPPQ56P03 285 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC10-210ENST00000483973 TPTE2Q6XPS3 522 aa17.73■□□□□ 0.43
TRAPPC10-210ENST00000483973 TAF1DQ9H5J8 278 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC10-210ENST00000483973 ZNF277Q9NRM2 450 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC10-210ENST00000483973 NIP7Q9Y221 180 aaKnown RBP eCLIP17.73■□□□□ 0.43
TRAPPC10-210ENST00000483973 CLEC11AQ9Y240 323 aa17.73■□□□□ 0.43
TRAPPC10-210ENST00000483973 NUDCQ9Y266 331 aa17.73■□□□□ 0.43
TRAPPC10-210ENST00000483973 U2AF1L5P0DN76 240 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC10-210ENST00000483973 U2AF1Q01081 240 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRAPPC10-210ENST00000483973 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRAPPC10-210ENST00000483973 LDHDQ86WU2 507 aa17.72■□□□□ 0.43
TRAPPC10-210ENST00000483973 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
TRAPPC10-210ENST00000483973 NUP98P52948 1817 aa17.71■□□□□ 0.43
TRAPPC10-210ENST00000483973 GTF2E1P29083 439 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC10-210ENST00000483973 OLFM4Q6UX06 510 aa17.71■□□□□ 0.43
TRAPPC10-210ENST00000483973 L3MBTL3Q96JM7 780 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC10-210ENST00000483973 ZNF541Q9H0D2 1346 aa17.71■□□□□ 0.42
TRAPPC10-210ENST00000483973 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
TRAPPC10-210ENST00000483973 PASKQ96RG2 1323 aa17.7■□□□□ 0.42
TRAPPC10-210ENST00000483973 CNTNAP1P78357 1384 aa17.69■□□□□ 0.42
TRAPPC10-210ENST00000483973 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
TRAPPC10-210ENST00000483973 NBPF26B4DH59 902 aa17.69■□□□□ 0.42
TRAPPC10-210ENST00000483973 FOXN1O15353 648 aa17.69■□□□□ 0.42
TRAPPC10-210ENST00000483973 NBPF10Q6P3W6 841 aaKnown RBP17.69■□□□□ 0.42
TRAPPC10-210ENST00000483973 RTKN2Q8IZC4 609 aa17.69■□□□□ 0.42
TRAPPC10-210ENST00000483973 NBPF15Q8N660 670 aa17.69■□□□□ 0.42
TRAPPC10-210ENST00000483973 HACL1Q9UJ83 578 aa17.69■□□□□ 0.42
TRAPPC10-210ENST00000483973 TMEM88BA6NKF7 163 aa17.68■□□□□ 0.42
TRAPPC10-210ENST00000483973 SYNE4Q8N205 404 aa17.68■□□□□ 0.42
TRAPPC10-210ENST00000483973 NGEFQ8N5V2 710 aa17.68■□□□□ 0.42
TRAPPC10-210ENST00000483973 AIDAQ96BJ3 306 aa17.68■□□□□ 0.42
TRAPPC10-210ENST00000483973 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
TRAPPC10-210ENST00000483973 KLRG2A4D1S0 409 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC10-210ENST00000483973 ALDH1B1P30837 517 aa17.67■□□□□ 0.42
TRAPPC10-210ENST00000483973 EPHX2P34913 555 aa17.67■□□□□ 0.42
TRAPPC10-210ENST00000483973 IARSP41252 1262 aaKnown RBP17.67■□□□□ 0.42
TRAPPC10-210ENST00000483973 HLFQ16534 295 aa17.67■□□□□ 0.42
TRAPPC10-210ENST00000483973 ITGBL1O95965 494 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC10-210ENST00000483973 VEGFBP49765 207 aa17.66■□□□□ 0.42
TRAPPC10-210ENST00000483973 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
TRAPPC10-210ENST00000483973 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
TRAPPC10-210ENST00000483973 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC10-210ENST00000483973 ADAMTSL1Q8N6G6 1762 aa17.65■□□□□ 0.42
TRAPPC10-210ENST00000483973 RGL2O15211 777 aa17.64■□□□□ 0.41
TRAPPC10-210ENST00000483973 PPP2R1AP30153 589 aa17.64■□□□□ 0.41
TRAPPC10-210ENST00000483973 MAP1SQ66K74 1059 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC10-210ENST00000483973 PNMA8AQ86V59 439 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC10-210ENST00000483973 NUTM1Q86Y26 1132 aa17.64■□□□□ 0.41
TRAPPC10-210ENST00000483973 JDP2Q8WYK2 163 aa17.64■□□□□ 0.41
TRAPPC10-210ENST00000483973 FZD9O00144 591 aa17.63■□□□□ 0.41
TRAPPC10-210ENST00000483973 HTATSF1O43719 755 aaKnown RBP17.63■□□□□ 0.41
TRAPPC10-210ENST00000483973 CTCFP49711 727 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC10-210ENST00000483973 CNTROBQ8N137 903 aa17.63■□□□□ 0.41
TRAPPC10-210ENST00000483973 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
TRAPPC10-210ENST00000483973 PRDM10Q9NQV6 1147 aa17.63■□□□□ 0.41
TRAPPC10-210ENST00000483973 GJA3Q9Y6H8 435 aa17.63■□□□□ 0.41
TRAPPC10-210ENST00000483973 KDM3BQ7LBC6 1761 aa17.62■□□□□ 0.41
TRAPPC10-210ENST00000483973 DEFB115Q30KQ5 88 aa17.62■□□□□ 0.41
TRAPPC10-210ENST00000483973 GPC2Q8N158 579 aa17.62■□□□□ 0.41
TRAPPC10-210ENST00000483973 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
TRAPPC10-210ENST00000483973 TRPM7Q96QT4 1865 aa17.61■□□□□ 0.41
TRAPPC10-210ENST00000483973 NEFMP07197 916 aa17.61■□□□□ 0.41
TRAPPC10-210ENST00000483973 EIF6P56537 245 aaKnown RBP17.61■□□□□ 0.41
TRAPPC10-210ENST00000483973 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
TRAPPC10-210ENST00000483973 ABT1Q9ULW3 272 aaKnown RBP17.61■□□□□ 0.41
TRAPPC10-210ENST00000483973 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms